3UMV,1DNP,3FY4


Conserved Protein Domain Family
DNA_photolyase

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pfam00875: DNA_photolyase 
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DNA photolyase
This domain binds a light harvesting cofactor.
Statistics
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PSSM-Id: 425921
Aligned: 67 rows
Threshold Bit Score: 101.128
Created: 16-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3UMV_A           40 VVYWMLRDQRLADNWALL----HAaglaAASASPLAVAFALFPRpf--------llSARRRQlgFLLRGLRRLAADAAAR 107 Japanese rice
Q2S1Q9           23 VLYWMEQSQRAQHNPALEralhHA----SETGLPLLVVCGVTDDf----------pEATLRHhtFLLEGLQETKQRLADR 88  Salinibacter...
Q9Q8H4           20 VVYWMYREHRIRDNWGLYyaqqKA----IRHAVPLYVCVCLT-Sf----------hLTTSRHvtFLLEGLRDVEDECVKR 84  Myxoma virus
Q8TIS6           19 VAYWMSRDQRVEDNWALLfaqvIA----QEANVPVVVVFCLIEGf----------lGAGRRHyeFMLKGLQELEEALSRK 84  Methanosarci...
XP_001422939     28 VVYWCDRDRRCANNDALGrameLA----NERRVPLVVAMHVGTDlsgs-----gigGARRAV--FALKGLKELDEDLRAR 96  Ostreococcus...
XP_001417095     29 VVYWLSRDQRVRDNWALLracdVA----RANDAPVVIAFNLLTKf----------lGAGARQfgFMLRGLRELEGAAKAK 94  Ostreococcus...
Q6AK21           27 VVYWVSRDQRVRDNWALLwaqqEA----ISRQKGLLVVFCLVPDy----------lGAKSSQylFMLRGLARMQKKLHEM 92  Desulfotalea...
Q72FV1           19 VLYWMHREHRAHDNWALV----HAigeaKAAGAPLAVVWCLSPRfl--------daAYRQFH--FLLRGMRGTAETLREH 84  Desulfovibri...
Q3IPX9            4 AVVWFRDDLRVTDNPTLA----DA----VAAAETVIPVYTFDPDryteseygppktGGHRAV--FRRQAVADLRASLRDR 73  Natronomonas...
jgilanl:CHU1053   4 SIVWFKTDLRLHDNETLV----RA----IEQSDEIIPVYCLDEDhfkitpfgfqktGNFRAQ--FLLESLNDLDTNLRKL 73  Cytophaga hu...
3UMV_A          108 HLPFFLFTG-GPAE-IPALVQRLGASTLVADFSPLRPVREALDAVVGDLR-REapGVAVHQVDAHNVVPVWTASAKME-Y 183 Japanese rice
Q2S1Q9           89 GLKLVVREG-APDDvALAHAG--AAAVLVTDRGYLRHQKQWRARVAEEAP------CRVEQVEGDVVVPVETV-TDKAeY 158 Salinibacter...
Q9Q8H4           85 SFGFVVRYG-RPEVvLPEEVKKRNARWVFVDFYPLRVPEKDISNVVESLK-D---VATVIQVDSHNIVPCWIT-SSKQeY 158 Myxoma virus
Q8TIS6           85 KIPFYFLRG-DPGQkIPEFVKEYEVGTLITDFSPLRIKAEWVGKIISAIE------IPFFEVDAHNVVPCWEA-SPKQeY 156 Methanosarci...
XP_001422939     97 GVSTRTTTGsDVAGgIVETCETLNASAVVCDFSPLREGRAAREAVARVV------EVPVIEVDAHNVVPAWVT-SDKQeY 169 Ostreococcus...
XP_001417095     95 NVTFAMTYGdEPAIaIDALAKKIGAKTIVCDFSPLRDGLKWRKELAALCEaR---SAHCEECDAHNVVPCWEA-SDKLeV 170 Ostreococcus...
Q6AK21           93 NIHFTLFEQ-SPDDiLPGFLRQIDAHLLVSDFDPLRIKRQWTEQLIAQVV------TPIYQVDTHNIIPAWMV-SDKKeY 164 Desulfotalea...
Q72FV1           85 GIPFFLLQG-DPADeVPRFAATHGTGLVVTDFDVLRLKRAWLGQVREALA------CPLHEVDGRNVVPCRMASDKRE-Y 156 Desulfovibri...
Q3IPX9           74 GGDLLVRSG-RPATvVPELAQRAGADAVYAQTKPATEERRRAADVASALD-DA--GIALRQRWTHTLYHPDDL-PTPPtD 148 Natronomonas...
jgilanl:CHU1053  74 GSGLIVVRG-KPETeLYKIVKQYEAFKVFAKREVAYEEQQTEARVEKEIW-KL--GCTFESFSTSTLYHAQDLPFS-IkD 148 Cytophaga hu...
3UMV_A          184 SAKTFRGKVSKVMDEYLVEFPE--LP 207 Japanese rice
Q2S1Q9          159 AARTIRPKIHEHLERCLQLPEP--VP 182 Salinibacter ruber DSM 13855
Q9Q8H4          159 SARTFRLKIQKLLTTYLTKFPN--IG 182 Myxoma virus
Q8TIS6          157 AAHTFRPKLYGHLSEFLEEFPElePN 182 Methanosarcina acetivorans
XP_001422939    170 AARTIRPKIHRNLGDFLTAPQA--LD 193 Ostreococcus lucimarinus CCE9901
XP_001417095    171 GARTLRGRLAKRYPEFLHEFPE--VP 194 Ostreococcus lucimarinus CCE9901
Q6AK21          165 AAYTIRPKIKRLLDDFLTDIPP--LQ 188 Desulfotalea psychrophila
Q72FV1          157 AARTLRPKIHRLLPEYLDPFPSlate 182 Desulfovibrio vulgaris str. Hildenborough
Q3IPX9          149 IDDTFTPWRKETEAAATVRDPRsaPE 174 Natronomonas pharaonis DSM 2160
jgilanl:CHU1053 149 IPEVFTNFRKKVEKESSirsvfqkPA 174 Cytophaga hutchinsonii ATCC 33406
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