5WJT


Conserved Protein Domain Family
Flagellin_C

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pfam00700: Flagellin_C 
Click on image for an interactive view with Cn3D
Bacterial flagellin C-terminal helical region
Flagellins polymerize to form bacterial flagella. There is some similarity between this family and pfam00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate and this is shown to be correct as structurally this family forms an extended helix that interacts with pfam00700.
Statistics
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PSSM-Id: 425827
Aligned: 18 rows
Threshold Bit Score: 83.1497
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5WJT_H       219 KVVDEAIYQVSSQRAKLGAVQNRLEHTINNLSASGENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQN 298 Bacillus subtilis
Q03841       309 AGVDEALTDMTSAAASLGSISSRIDLQSDFVNKLSDSIDSGVGRLVDADMNEESTRLKALQTQQQLAIQALSIANSDSQN 388 Sinorhizobium m...
CBG39972     429 DMVDSARTQLDKVRSDMGSVQIQLVSTINNISTTQVNVKAAESQIRDVDFAAESANFSKNNILAQSGSFALAQANAVQQN 508 Helicobacter mu...
P0A0S1       425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKNNILAQSGSYAMSQANTVQQN 504 Helicobacter py...
P56963       487 DIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVDFAAESANYSKANILAQSGSYAMAQANSVQQN 566 Campylobacter j...
Q89F45       270 GLIGGAITDLATLGGGVGTVQQRITSATNKLKTQQDILNNQIVGMEKVDPTEASVRVNTLQTQIQTALALTSQLQKI--S 347 Bradyrhizobium ...
Q21AA9       265 EDIGEAINDLAGVGAKIGTAQEQTTGATERLKVQGDLITQQINAMEQVDPTEASVRVTNLKSQLEMSLALTARIQQL--S 342 Rhodopseudomona...
Q2YJG1       265 QITTQAVTETTSEQTTLGLAQSRTEAATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNM--S 342 Brucella abortu...
1_pfamImport   2 TNIGTAINGLNQQQSQLGLSESRVSKANDSLEAQKKIIETHLLDIEGIDTYEAKTRLDLLQQQIEIAYSLTSRLQKM--S 79 
Q92RZ1       263 GYVEQANTQITAERSTLGISEARVKKANTSLQAQIKLINTHITDLEGVDTYEASTRMNTLLTQVETSYTLTARIQRL--S 340 Sinorhizobium m...
5WJT_H       299 VLQLL 303 Bacillus subtilis
Q03841       389 VLSLF 393 Sinorhizobium meliloti 1021
CBG39972     509 VLRLL 513 Helicobacter mustelae 12198
P0A0S1       505 ILRLL 509 Helicobacter pylori 26695
P56963       567 VLRLL 571 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Q89F45       348 LINYL 352 Bradyrhizobium japonicum
Q21AA9       343 ILNYL 347 Rhodopseudomonas palustris BisB18
Q2YJG1       343 LLNYL 347 Brucella abortus 2308
1_pfamImport  80 LVNYL 84 
Q92RZ1       341 LIDFL 345 Sinorhizobium meliloti
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