5ZHO


Conserved Protein Domain Family
VP4_haemagglut
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pfam00426: VP4_haemagglut 
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Outer Capsid protein VP4 (Hemagglutinin) Concanavalin-like domain
This entry represents the N-terminal concanavalin-like domain from the VP4 protein of rotavirus.
Links
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Statistics
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PSSM-Id: 395342
Aligned: 2 rows
Threshold Bit Score: 239.915
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
5ZHO_A   3 ITGPHTNT-------------------VIEWSNliNTNTWLlyqkplnSVRLLKHGPDTYNSNLAAFELwygKSGTTITs 63  Human rotavirus C/Bri...
A2T3T2  65 LDGPYQPTtfnppvdywmllapttpgvIVEGTN--NTDRWL-------ATILIEPNVQSENRTYTIFGI---QEQLTVS- 131 Simian rotavirus A/SA...

5ZHO_A  64 vyyNTINNQNKTHDANSdclilfwnegstqlekqvVTFNWNVG--GILikpINSSRMRICMSGMENF--------NNDSF 133 Human rotavirus C/Bri...
A2T3T2 132 ---NTSQDQWKFIDVVK------------------TTANGSIGqyGPL---LSSPKLYAVMKHNEKLytyegqtpNARTA 187 Simian rotavirus A/SA...

5ZHO_A 134 NWENWNHEfprsnpGININMYTEYFL----ASS 162 Human rotavirus C/Bristol
A2T3T2 188 HYSTTNYD------SVNMTAFCDFYIiprsEES 214 Simian rotavirus A/SA11-H96
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