5OQJ


Conserved Protein Domain Family
TFIIB

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pfam00382: TFIIB 
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Transcription factor TFIIB repeat
Statistics
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PSSM-Id: 425652
Aligned: 13 rows
Threshold Bit Score: 98.4843
Created: 16-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5OQJ_M 122 KDNEVQAAFAKITMLCDAAELPKI---VKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGCRRAEVARTFKEIQSLIHV 198 Saccharomyces cerevis...
P29052 203 TSVDLITTADFMCRFCANLDLPNM---VQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKEIGDIAGV 279 fruit fly
Q05959 234 ITTGQTSAETFIPRFCSHLGLSVQ---VANAAEYIAKHSKDVNVLAGRSPITIAAAAIYMATLLFKLNISPTRISQTLQV 310 Kluyveromyces lactis ...
Q5V5V1 224 LKMEPVDPKQYVPRFASELELSEE---VQSKANEIIDTTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQV 300 Haloarcula marismortui
P61998 201 PKKLFVKPTDYVNKFADELGLSEK---VRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQREVAEVARV 277 Pyrococcus furiosus D...
P43072 179 TSLPLADPSLFIQHFVEKLDFKDKatkVAKDAVKLAHRMAADWIHEGRRPAGIAGACVLLAARMNNFRRSHAEIVAVSHV 258 Candida albicans SC5314
P46070 182 VKLPLADPSLFIQHFAEKLELGDKkikVIRDAVKLAQTMSRDWMYEGRRPAGIAGACLLLACRMNNLRRTHSEIVAISHV 261 Kluyveromyces lactis ...
Q92994  82 RAQTLQNGRRHIHHLGNQLQLNQH---CLDTAFNFFKMAVSRHLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQV 158 human
P43072  84 REQTLSNGKRKIKRIAAALKIPDY---IAEAAGEWFRLALTLNFVQGRRSNNVLATCLYVACRKERTHHMLIDFSSRLQI 160 Candida albicans SC5314
P46070  87 RETTLNNARRKLKAVSYALNIPEY---VTDAAFQWYRLALSNNFVQGRKSQNVIAACLYIACRKERTHHMLIDFSSRLQV 163 Kluyveromyces lactis ...
P29052 109 SDRSLISAFKEISSMADRINLPKT---IVDRANNLFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKI 185 fruit fly
Q92994 176 INAPAIDPCLYIPRFAHLLEFGEKnheVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEVISVVKV 255 human
Q05959 126 KDNELQAAYAKITMMCDAAELPKI---VKDCAKEAYKLCFEERVLKGKSQESIMASVILVGCRRAEVGRSFKEILSLTNV 202 Kluyveromyces lactis ...
5OQJ_M 199 KTKEFGKTLNIMKNI 213 Saccharomyces cerevisiae S288C
P29052 280 ADVTIRQSYKLMYPH 294 fruit fly
Q05959 311 TEGTVKGGYKALYEH 325 Kluyveromyces lactis NRRL Y-1140
Q5V5V1 301 TEVTIRNRYQEQIEA 315 Haloarcula marismortui
P61998 278 TEVTVRNRYKELVEK 292 Pyrococcus furiosus DSM 3638
P43072 259 GEETLQRRLNEFKKT 273 Candida albicans SC5314
P46070 262 AEETLQQRLNEFKNT 276 Kluyveromyces lactis NRRL Y-1140
Q92994 159 NVYVLGKTFLLLARE 173 human
P43072 161 SVYSLGATFLKMVKA 175 Candida albicans SC5314
P46070 164 SVYSIGATFLKLAKK 178 Kluyveromyces lactis NRRL Y-1140
P29052 186 SKKEIGRCFKLTLKA 200 fruit fly
Q92994 256 CESTLRKRLTEFEDT 270 human
Q05959 203 RKKEIGKTFTIIKNI 217 Kluyveromyces lactis NRRL Y-1140
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