3RKO,7A23,3RKO


Conserved Protein Domain Family
Proton_antipo_M

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pfam00361: Proton_antipo_M 
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Proton-conducting membrane transporter
This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Statistics
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PSSM-Id: 425636
Aligned: 17 rows
Threshold Bit Score: 172.113
Created: 16-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3RKO_B               133 ADNLLLMYLGWEGVGLCSYLLIGFYYTDpKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELapA------ 206 Escheri...
P33607               133 ADNLLLMYLGWEGVGLCSYLLIGFYYTDpKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVEL--Ap----- 205 Escheri...
WP_011748520         135 ADNLLQMFFGWEGVGVASYLLIGFYYKKaSANAAAMKAFIVNRVGDFGFLLGIFGIYWLTGSVQFDEIFRQ--Vpqlaqt 212 Paracoc...
P46620               141 SSNLIQIYFFWELVGMCSYLLIGFWFTRpIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKI--Annw--- 215 Zea mays
P34854               108 SPNLISILLGWDGLGLVSYCLVIYF-QNvKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYIFYLDMM--------- 177 African...
P18939               112 ATELMLFYISFEATLIPTLILITRWGNQpERLSAGIYLLFYTLISSLPLLVSILYLHTNTGTLHLPIIKLT--H------ 183 chicken
P34852               106 SMSVFMFYLFFEASLIPTLFLILGWGYQpERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFTLLLNY--------- 176 African...
jcvi:cds.ATEG_m0050A 130 vlDVLLFYIFFESILPPLFLLIGLFGSS-NKVRASFYLFLYTLLGSLFMLLSIVVMSSIMGTTDFDALSKA--------- 199 Aspergi...
P0AFF0               122 ANHLASLFLGIELISLPLFGLVGYAFRQkRSLEASIKYTILSAAASSFLLFGMALVYAQSGDLSFVALGKN--Lg----- 194 Escheri...
WP_011748519         130 ALDLVLFYLFFEAGLIPMFLIIGIWGGK-DRIYASFKFFLYTFLGSVLMLVAMIAMYRMAGTTDIPTLLTF--Dfpsenf 206 Paracoc...
3RKO_B               207 ---HFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADA-MAGPTPVSALIhAATMVTAGVYLIARTHGLFL---MTPEV 279 Escheri...
P33607               206 --aHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADA-MAGPTPVSALIhAATMVTAGVYLIARTHGLFL---MTPEV 279 Escheri...
WP_011748520         213 emhFLWRDWNAANLLGFLLFVGAMGKSAQLLLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLVCRMSPLYE---FAPDA 288 Paracoc...
P46620               216 -ipNNGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLLARLLPLFI---SLPWI 290 Zea mays
P34854               178 ------KNNIEMMIIGGLVMLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFNDVLM----NWWM 246 African...
P18939               184 ---PNLPASWTSLLSSLALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLL-AALLLKLGGYGIMRVTLLMEp--VSNFL 257 chicken
P34852               177 -------SFSNFNLLYLSLVFAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGILLKLGGYGLLRMFSLLQi--SGVKY 246 African...
jcvi:cds.ATEG_m0050A 200 -----NFSYITQLFLFYGIFIAFAVKTPVIFLNTWLLKAhVESPLSGSIIL-AGIVLKLSLYGIFRLMLPLLp-kASINY 272 Aspergi...
P0AFF0               195 ---DGMLNEPLLLAGFGLMIVGLGFKLSLVPFHLWTPDVyQGAPAPVSTFL--ATASKIAIFGVVMRLFLYApvgDSEAI 269 Escheri...
WP_011748519         207 rllGMTVVGGMQMLLFLAFFASFAVKMPMWPVHTWLPDAhVQAPTAGSVLL-AAVLLKMGGYGFLRFSLPMFp-vASGVA 284 Paracoc...
3RKO_B               280 LHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGV-----QAWDAAIFHLMTHAFFKALLFLASgSVIL 354 Escheri...
P33607               280 LHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGV-----QAWDAAIFHLMTHAFFKALLFLASgSVIL 354 Escheri...
WP_011748520         289 KNFIVIIGATTAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVAAGVg---vY--SAAMFHLLTHAFFKAMLFLGAgSVIH 363 Paracoc...
P46620               291 MSFISLIGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIg---sY--QAALFHLITHAYSKALLFLGSgSVIH 365 Zea mays
P34854               247 AQFLLLVSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMg---fY--KLAFFHLLTHALFKALLFMCAgSIIH 321 African...
P18939               258 HYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIqt--qWSFSGAMILMISHGLTSSLLFCLA-NTNY 334 chicken
P34852               247 NYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTmt--yWGLTGSYALMIAHGLCSSGLFCLA-NISY 323 African...
jcvi:cds.ATEG_m0050A 273 TYIIYVIGVITILYASFSTLRTIDIKELIAYSSVSHAAVYLIGAFSnt--iQGIEGSIALGLAHGFVSSGLFICAgGILY 350 Aspergi...
P0AFF0               270 RVVLAIIAFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIAlqtgeMSMEAVGVYLAGYLFSSLGAFGVVsLMSS 349 Escheri...
WP_011748519         285 QPYVFWLSAIAIVYTSLVALAQSDMKKVIAYSSVAHMGYVTMGVFAan--qIGVDGAIFQMLSHGFISGALFLCV-GVIY 361 Paracoc...
3RKO_B               355 A-CH--------HEQNIFKMGGLRKSIPLVYLCFLVGGAALS--ALPLvT----AGFFSKDEILAGAMANGHINLMVAg- 418 Escheri...
P33607               355 A-CH--------HEQNIFKMGGLRKSIPLVYLCFLVGGAALS--ALPL-Vt---AGFFSKDEILAGAMANGHINLMVAg- 418 Escheri...
WP_011748520         364 A-MH--------HEQDMRNYGGLRKKIPLTFWAMMIGTFAITgvGIPL-ThlgfAGFLSKDAIIESAYAGSGYAFWLL-- 431 Paracoc...
P46620               366 S-MEplvgyspdKSQNMVLMGGLRKYVPITRTTFLCGTLSLC--GIPP-L----ACFWSKDEILSNSWLYSPFFGIIA-- 435 Zea mays
P34854               322 N-MK--------NSQDIRMMGSLSMSMPLTCSCFNVANLALC--GMPF-L----AGFYSKDLILEMVMLSYVNVFSFFlf 385 African...
P18939               335 E-RT--------HSRILILTRGLQPLLPLMSVWWLLANLTNM--ALPP-T----TNLMAELTIMVALFNWSSPTIILT-- 396 chicken
P34852               324 E-RM--------GSRSLLINKGLLNFMPTLSLWWFLLCSGNM--AAPP-T----LNLLGEISLLNSIVSWSWITMIML-- 385 African...
jcvi:cds.ATEG_m0050A 351 D-RS--------STRLITYYRGMAQVMPIFSVLFFILALGNS--GTPL-T----LNFIGEFMSLYGVFERMPILGVLA-- 412 Aspergi...
P0AFF0               350 PyRGp-------DADSLFSYRGLFWHRPILAAVMTVMMLSLA--GIPM-T----LGFIGKFYVLAVGVQAHLWWLVGAv- 414 Escheri...
WP_011748519         362 D-RM--------HTREIDAYGGLVNRMPAYAAVFMFFTMANV--GLPG-T----SGFVGEFLTLMGVFRVDTWVALVA-- 423 Paracoc...
3RKO_B               419 LVGA 422 Escherichia coli BL21(DE3)
P33607               419 LVGA 422 Escherichia coli K-12
WP_011748520         432 VIAA 435 Paracoccus denitrificans
P46620               436 SFTA 439 Zea mays
P34854               386 FFST 389 African malaria mosquito
P18939               397 GTAT 400 chicken
P34852               386 SFLS 389 African malaria mosquito
jcvi:cds.ATEG_m0050A 413 STSI 416 Aspergillus terreus
P0AFF0               415 VVGS 418 Escherichia coli K-12
WP_011748519         424 TSGV 427 Paracoccus denitrificans
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