1RQJ,1UBW,3LDW,5H9D,5ZE6


Conserved Protein Domain Family
polyprenyl_synt

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pfam00348: polyprenyl_synt 
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Polyprenyl synthetase
Statistics
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PSSM-Id: 425626
Aligned: 415 rows
Threshold Bit Score: 146.114
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1RQJ_A        29 NTPVVETMQYGAlLGGKRLRPFLVYATGHMFGv---------S-------T---NTLDAPAAAVECIHAYSLIHDDLpaM 89  Escherichia coli
CCD78373      40 EQHFQNVTSYNL-SSGKRIRGVLVVLSYMVFSnk-------nEn-----sRknlSCVYLIGWCVELLHAGFLVLDDI--I 104 Schistosoma man...
1_pfamImport   1 QYRCRNLFDNTV-IGGKYSRASLCVDATRALQph-------lRd-----eTqelKAVCEAAATLEIIQSFYLIADDI--M 65 
XP_001565042  33 KRYLKDMMDTTC-LGGKYNRGLCVVDVAEAMAkda-----rmDaa---amErtlHDACVCGWMIEMLQAHFLVEDDI--M 101 Leishmania braz...
EFW99779      35 MERLNRILIQVQ--GGQISRPRVMFKLFDKLAe--------rEp-----tEdevREVYVMAWVVELLQFAILASDDI--V 97  Grosmannia clav...
XP_001318110  32 QQHFHDLVDYTI-AGGKCLRGLLSVFGFLELTg--------ySp-----dSkeaEAAYALGWVQEILQASFLVADDL--M 95  Trichomonas vag...
EAY16858      31 EKHCLEVLDYST-KGGKLTRGVVCASAFIESTg--------cDp-----dSeeaKIGYTIGWVLELMQAAFLIADDF--M 94  Trichomonas vag...
XP_001325885  31 QKHCIDMLEYST-KGGKMLRGIMTAAVYLELTg--------ySp-----dSeeaKVGYYLGWVEEIIHAGYLIADDL--M 94  Trichomonas vag...
3LDW_C        66 SKYYKLLFDYNC-LGGKNNRGILVILIYEYVKn--------rDi-----nSsewEKAACLAWCIEILQAAFLVADDI--M 129 Plasmodium viva...
Q4UAU6        44 LLYYSYAVQYNL-QGGKMLRGTMVLSTVKSLCgtnipenlmtQtlivgmyNsnhLKQFIVAWCVELLQTSFLVADDI--I 120 Theileria annulata
1RQJ_A        90 DDDDLRRGLPTCHVK-----FGEA-N-AILAGDALQTLAFSILSDAdmpevsdrDR-----------ISMISELASASGi 151 Escherichia coli
CCD78373     105 DNSTLRRGQPCWHCTqidsnRGLI---GVNDGLHLILSSKYLIHSLfaen-qsdVDsyswkdknnvyLKLCKLFDEISY- 179 Schistosoma man...
1_pfamImport  66 DASETRRGKPCWYRRe---gVGMS---AINDAFIMDSFVEDILRLSlp----ghVNl----------DRLCEAYRRSKQ- 124
XP_001565042 102 DNSKTRRGRPCWYLH-----PGVTtQvAINDGLILLAWATQVALHYfad--rpfLA------------EVLRVFHDVDF- 161 Leishmania braz...
EFW99779      98 DGDLWRRGRWSWHRQ-----PGVG-LsAVYDTFVATFLALAFLKKHld----qkKAy----------IGMVESINREIL- 156 Grosmannia clav...
XP_001318110  96 DKSPLRRDKPCWYCL-----QENK-YtAVSDSYFLENVLYMIIDKYfadfpvevVL------------EIKHLLHITTL- 156 Trichomonas vag...
EAY16858      95 DQSETRRGMICWYKIe---sVNEQ---AVNDAMIVENLAFVLLDSVrsk--lniKSy----------ARLVQYLRTINT- 155 Trichomonas vag...
XP_001325885  95 DQSETRRGQECWYKRe---eIGDQ---AVNDGLILQDLAYVLLDKIrnk--lntKYy----------AKLIEFSRKIGT- 155 Trichomonas vag...
3LDW_C       130 DKGEMRRNKYCWYLLk---dVETK-N-AVNDVLLLYNSIYKLIEIYlr----neSCy----------VDVIATFRDATL- 189 Plasmodium viva...
Q4UAU6       121 DKSTKRRSNTCWYLVp---tIGVS-N-AINDVMFLYTLIYRILFNTmk----dsKKf----------LEIIETFNRVSM- 180 Theileria annulata
1RQJ_A       152 aGMCGGQALD---L-----------DA---------------E--GKHVP---------LDALERIHRHKTG-ALIRAAV 190 Escherichia coli
CCD78373     180 -KTCSGQCLD---VlssnpnnqcilDR---------------K--QNNLEfdsftrnysPDVFEAITHWKTGfYTFYLPV 238 Schistosoma man...
1_pfamImport 125 -KTLIGQVLDts--------------------------------svHQTSsf------tWDRYELMVENKTShYTVYHPL 165
XP_001565042 162 -TTTIGQLYDvtsMvdsakldanvaHA---------------N--TTDYVey------tPFNHRRIVVYKTAyYTYWLPL 217 Leishmania braz...
EFW99779     157 -YVQLYQSFD---Tm----------VA---------------NqgPGNVStf------cEHKLRDISLGLCG--YFFLPF 199 Grosmannia clav...
XP_001318110 157 -RTALGQYID---M----------------------------H--KKEPT---------IDNWTLTVTNKTAyYTIWQPF 193 Trichomonas vag...
EAY16858     156 -ITTMGQTLD---F----------------------------I--NKTKS---------FESYEVSVRNKTShYSLCAPI 192 Trichomonas vag...
XP_001325885 156 -YTTIGQTYDfiak------------------------------------------ipsFQEYNQIVTYKTAfYTVVSPI 192 Trichomonas vag...
3LDW_C       190 -KTIIGQHLDtniFsd-------kySDahreidvnninvpeqP--VIDINmi------nFGVYKNIVIHKTAyYSFFLPI 253 Plasmodium viva...
Q4UAU6       181 -TTILGQHLD---Iyes----------------------nsdV--LFHDSke------aTKLFAEICKNKTSyYSFFLPL 226 Theileria annulata
1RQJ_A       191 RLGALSAGd-KGR-RAL--PVLDKYAESIGLAFQVQDDILDVVGDTATLGKRqGADQQLGKSTYPALLGLE-------QA 259 Escherichia coli
CCD78373     239 ACGMILAE--VDTdDIF--KSVQHILLKLGNYFQAQDDYLDCFGDSEITGKV-GTDIAEGKCTWLIVEALKyl----sPE 309 Schistosoma man...
1_pfamImport 166 QMALLMSD--V---LAYh-GAVKKVAYQIGFLFQSQDDFLDVYGDPIVTGKI-GTDIQDGKCTWLAVRALQkmqntqsPA 238
XP_001565042 218 VMGLLVSG--TAEkVDK--EVTHKVSMVMGEYFQVQDDVMDCFTSPEKLGKI-GTDIEDAKCSWLAVTFLAia----pAE 288 Leishmania braz...
EFW99779     200 SLMLHYLGqgT-P-DNL--RQTREITDEISIYYQAQNDYIDLYGDRSNNGKD-GRDIRENKCSWLIVEALNrs----dKG 270 Grosmannia clav...
XP_001318110 194 LSGIVASQkiP-A-EVWqsKPFEDALIKAGVLFQCQDDWLDQYGQAAVTGKV-GTDIQDGKVSWLFAKAMEvg----nEE 266 Trichomonas vag...
EAY16858     193 ILGLIASQk-F-EvTDKf-ESIEKFALRLGYYFQVQDDYFDVYGDPQVTGKI-GSDIKDGKNTWLFCKAYEla----nDE 264 Trichomonas vag...
XP_001325885 193 VFGLIGSQ--IYDvDDKf-EDIEKFMIRLGNYFQVQDDYIDVYGDPKHTGKI-GTDIQDAKISWCYCKAYEla----nDD 264 Trichomonas vag...
3LDW_C       254 VCGMLLAG--IAVdNLIy-KKIEDISMLMGEYFQIHDDYLDIFGDSTKTGKV-GSDIQNNKLTWPLIKTFElc----sEP 325 Plasmodium viva...
Q4UAU6       227 KLGMMLSG--VELsNLFy-SKVESISILIGTLFQAQDDYLDCYGDPDNFGKN-GTDIQTRKCSWLLSQALTia----sEE 298 Theileria annulata
1RQJ_A       260 Rk-KARDLID-DARqsLKQLaEQSLDT 284 Escherichia coli
CCD78373     310 QyeILKTNYGkPDLksQQTV-RNLYDT 335 Schistosoma mansoni
1_pfamImport 239 LyeEFKSVFGsTEPekVDRV-KEIYEQ 264
XP_001565042 289 KaaEFKANYGsADPakVAVI-KQLYAE 314 Leishmania braziliensis MHOM/BR/75/M2904
EFW99779     271 QrtALKNKYGrSDKecVDEV-KQIFND 296 Grosmannia clavigera kw1407
XP_001318110 267 QrkLLLENVGhHEPekVQIV-RDIYKA 292 Trichomonas vaginalis G3
EAY16858     265 QkkTLDQKIGhEEF--VEDI-KKLYEE 288 Trichomonas vaginalis G3
XP_001325885 265 QkkILKEKIGhEEY--VNDI-KQLYAD 288 Trichomonas vaginalis G3
3LDW_C       326 DkiKIVKNYGkNNLacVKVI-DSLYEQ 351 Plasmodium vivax Sal-1
Q4UAU6       299 QknLIKENIGhDDNskVDVV-KSIYRE 324 Theileria annulata
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