1HV8,4D25,6AH0,4W7S,2YJT,6L5M,3I5X,4LJY,3RC8,4S20,5VVR,5GN1,5Z3V,6LTJ,6IGM,6GEN,6HTS,1C4O,6JDE,2FWR,5ZAM,6H57,5AOR,6ACA,1GM5,3FHO,6B4K,2RB4,3RRM,4BRU


Conserved Protein Domain Family
Helicase_C

?
pfam00271: Helicase_C 
Click on image for an interactive view with Cn3D
Helicase conserved C-terminal domain
The Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase.
Statistics
?
PSSM-Id: 425571
Aligned: 421 rows
Threshold Bit Score: 45.6643
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1HV8_B        225 ERFEALCRL-L------------KNKEFygLVFCKTKRdtkEL----ASXLRDI-GFKAGAIHGDLSQSQRE-KVIRLFK 285  Methanocaldoc...
XP_003721544  480 AKLWVALQLlLhc--------vsEQRKT--LVFSRSRR---ILrl-lSFLLQEW-RLTHTQVDGDTPSERRC-AEVDRFN 543  Leishmania ma...
Q9SDA3        524 PLLSGLDYTpeei------dgdrSSTKM--VVFAHHHK---VLdg-iQEFICDK-GIGFVRIDGTTLPRDRQ-LAVQSFQ 589  thale cress
Q9VMX6        519 VKTRAVCAY-Lktl-------vkEQKKF--IIFAHHRV---MMdaisDFL--SGlKVHYIRIDGQTRSDHRS-DSVDTFQ 582  fruit fly
Q8BJL0        666 AKIPCVVEYiLdll-------dsGREKF--LVFAHHKV---ILdavaKEL--ERkNVQHIRIDGSTPSADRE-AQCQRFQ 730  house mouse
Q9TTA5        704 AKIPSIIEYiLdll-------esGREKF--LVFAHHKV---VLdaitKEL--ERkRVQHIRIDGSTSSADRE-TSASSFS 768  cattle
O41030        284 TKLNMLRKE-Iqn---------nPVEKT--LIFCNWIC---EMda-iREMLHSI-GHKSVTLNGKTPNSQRD-VNIKSFN 345  Paramecium bu...
O55764        441 SNFEISHPTkI-------------------IVFSMFTS---CLdllsEAIKEDYpNFKFVQVDGD--TKNRS-ELFDQFK 495  Invertebrate ...
Q9UTL9       1186 SKIDTISKHlLylk------hneLYPKV--VVFSQWLD---VLdv-lHKSFEAN-GIVFIRFDG----KSKN-TCLKRFK 1247 Schizosacchar...
Q06554       1356 AKIDFVIKL-IsylrlkseqenaDPPQV--ILYSQKTE---YL----KVIGKVLkLYHIEHLAC-LSNTANVgETINNFK 1424 Saccharomyces...
1HV8_B        286 --QKKIR-IL-IATDVXSRGIDVNDLNCVINYHLPQNPESYXHRIGRTGRAG 333  Methanocaldococcus jannaschii
XP_003721544  544 n-DAGVWvCL-LTTQVGGVGLTFNAASAVVLLDPSWNPSADAQAVDRVHRIG 593  Leishmania major strain Friedlin
Q9SDA3        590 f-SSEVKiAI-IGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRG 639  thale cress
Q9VMX6        583 k-KSSCKvAL-LSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIG 632  fruit fly
Q8BJL0        731 lsKGHTV-AL-LSITAANMGLTFSTADLVVFAELFWNPGVLIQAEDRVHRIG 780  house mouse
Q9TTA5        769 cpRALR--GV-LSITAANMGLTFSSADLVVFGELFWNPGVLMQAEDRVHRIG 817  cattle
O41030        346 e-DNDINfFI-IQIESGGIGLNLQVATRVFINSLSWNATTEIQAIARAHRIG 395  Paramecium bursaria Chlorella virus 1
O55764        496 n-DINTQgLF-LTYKVGSEGLNLTEATHCICIEPWWTNAVHNQAKARLWRTG 545  Invertebrate iridescent virus 6
Q9UTL9       1248 --EERSLqVLtLHARSQSSGLTLTNATHVFMCEPLLNSGIEMQAISRVHRIG 1297 Schizosaccharomyces pombe 972h-
Q06554       1425 r-QPSVTcLL-LNVKTLGAGLNLINAKHIFLLDPILNNSDELQAMGRNNRIG 1474 Saccharomyces cerevisiae S288C
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap