5OPT,5XYI


Conserved Protein Domain Family
Ribosomal_S3_C

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pfam00189: Ribosomal_S3_C 
Ribosomal protein S3, C-terminal domain
This family contains a central domain pfam00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.
Statistics
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PSSM-Id: 425514
Aligned: 231 rows
Threshold Bit Score: 72.3959
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5OPT_m          104 LRFKLLSNLQVRRAAMGIIRHVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKsgTAHKNFVDVATRHCHLRAGTLGV 183 Trypanosoma ...
CGB:Asulf_00122  98 LARALERGWYFRKAGYRFLYRIMEAGAKGCEIEISGKLTGERARTEKFLAGTMVHtgEPAISAVKTGFDVAIKKLGVMGI 177
WP_012940740     98 LARALERGWYFRRAGYRFLYRIMEAGAKGCQIEISGKLVSERARTEKFTAGTIVHtgDPAYELVDKGFDIAIKKLGVYGV 177 Archaeoglobu...
P54034           98 VAQSLERGLHFRRVGHTAVRRVMNAGAKGVIVIISGKLTGERARTEKFMAGYMKHcgEPAEELVDKGRAIAKTKPGVIGV 177 Methanocaldo...
Q6LXE7           98 IASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHcgEPAEALVNKSHQLAKLKLGIVGV 177 Methanococcu...
A6UWU3           98 IASSLERGMHFRRVAHSAIRRVMAQGAKGVVVIVSGKLTGERSRTEKYMEGYMKHcgEPSEELVDQCHKIAKLKLGVVGV 177 Methanococcu...
Q8TX35          107 LASALERGIHFRRAAYGALRRIMNAGAKGAMIILSGKLIGARARTEKFMEGAVKYcgEPGDEYMIEGYVQAVTKPGAIGV 186 Methanopyrus...
WP_016358852     98 IANNLQRGMHFRRVAYSNIRRIMGAGAQGVEITISGKIRGSRSAVAKFSEGYIKKcgEPATKFIKEGFATVHLKPGVLGV 177 Methanobrevi...
jgi:Mfer_0858    98 IASMLERGMHFRRVAYGTLRRIMAAGAQGAEITISGKIRGARATSVKFTEGHIKKcgEPAEKFVKTGFATAQLKPGVLGV 177
Q5JDH5           99 LAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLSGKLTGERAKSVRFYQGYLAKvgNPAETLVSRGYAQAQLKLGVIGV 178 Thermococcus...
5OPT_m          184 KVKI 187 Trypanosoma cruzi strain CL Brener
CGB:Asulf_00122 178 KVRI 181
WP_012940740    178 SVKI 181 Archaeoglobus profundus
P54034          178 TVKI 181 Methanocaldococcus jannaschii DSM 2661
Q6LXE7          178 TVKI 181 Methanococcus maripaludis S2
A6UWU3          178 TVKI 181 Methanococcus aeolicus Nankai-3
Q8TX35          187 TVRI 190 Methanopyrus kandleri AV19
WP_016358852    178 FVRI 181 Methanobrevibacter
jgi:Mfer_0858   178 HVKI 181
Q5JDH5          179 KVSI 182 Thermococcus kodakarensis KOD1
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