5HAT


Conserved Protein Domain Family
RuBisCO_large

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pfam00016: RuBisCO_large 
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Ribulose bisphosphate carboxylase large chain, catalytic domain
The C-terminal domain of RuBisCO large chain is the catalytic domain adopting a TIM barrel fold.
Statistics
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PSSM-Id: 425422
Aligned: 16 rows
Threshold Bit Score: 409.827
Created: 19-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5HAT_J         164 IKDLWRVL---GRPvinggfIVGTIIKPKLGLRPQPFANACYDFWLGG-DFIXNDEPQGNQVFAPFKDTVRAVADAMRRA 239 Rhodopseudomo...
A1B2Q2         159 IVVERERLdkfGRP------LLGATTKPKLGLSGKNYGRVVYEGLKGGlDFMKDDENINSQPFMHWRDRFLYCMEAVNKA 232 Paracoccus de...
EON24481       157 IVMEREFLnkyGRP------LLGATIKPKLGLSARNYGRVVYEACKGGlDFTKDDENINSQPFMRWRDRFLFGMEGVNKA 230 Nocardioides ...
WP_009153612   154 VVMEREYLnkhGRP------LLGATVKPKLGLSARNYGRVVYEALRGGlDFTKDDENINSQPFMRWRDRFLFCMEAVNRA 227 Saccharomonos...
jgi:Marme_1595 123 IAGTLNKLgltSGP------IIGGILKPNIGITPSDSADLVEQLVSANiDFIKDDEKLQSPPYSHVKNRIDSILPIIDKW 196 Marinomonas m...
Q2RRP5         143 ISALWKVL---GRPevdgglVVGTIIKPKLGLRPKPFAEACHAFWLGG-DFIKNDEPQGNQPFAPLRDTIALVADAMRRA 218 Rhodospirillu...
Q2W3S5         143 IAHMWKVL---GRPevnggmVVGTIIKPKLGLRPKPFADACHQFWLGG-DFIKNDEPQGNQVFAPFKDTMRLVADSMRRA 218 Magnetospiril...
Q3IX55         143 IADMWRVL---GRDvrnggmVVGTIIKPKLGLRPKPFADACHEFWLGG-DFIKNDEPQGNQTFAPLKETIRLVADAMKRA 218 Rhodobacter s...
WP_013292022   152 ISNLWKVL---GRSetdggyIAGTIIKPKLGLRPEPFAKACYDFWLGG-DFIKNDEPQANQPFCPMEVVMPKVAEAMDRA 227 Gallionella c...
BAN68648       145 ISDLWRIL---GRPivdggyIAGTIIKPKLGLRPEPFAEAAYQFWLGG-DFIKNDEPQGNQVFAPLKKVIPLVADAMKRA 220 endosymbiont ...
5HAT_J         240 QDKTGEAKLFSFNITADDHYEMLARGEFILETFADnad--hiAFLVDgYVAGPAAVTTARRAFPKQ--YLHYHRAGHGAV 315 Rhodopseudomo...
A1B2Q2         233 TAVTGEVKGHYLNITAGTMEEMYRRAELAKELGSV-------IVMVD-LIVGWTAIQSISNWCRQNdmILHMHRAGHGTY 304 Paracoccus de...
EON24481       231 MAETGELKGHYFNITAGTMEEMYRRAEFAKEIGSV-------IVMID-LTIGYTAIQSMANWCRENglLLHLHRAGHSTY 302 Nocardioides ...
WP_009153612   228 QAETGEIKGHYLNVTAATMEDMYERAEFAKELGSV-------IVMID-LTVGYTAIQSMARWARRNglILHLHRAGHGTY 299 Saccharomonos...
jgi:Marme_1595 197 QQKLGKKVIYAFNICHSDLGEIERNHEYLVKQGGD-------AAVINvNQIGICGLDTLNKY---SevILHAHTNGL-AF 265 Marinomonas m...
Q2RRP5         219 QDETGEAKLFSANITADDPFEIIARGEYVLETFGEnas--hvALLVDgYVAGAAAITTARRRFPDN--FLHYHRAGHGAV 294 Rhodospirillu...
Q2W3S5         219 QDETGQAKLFSANITADDPAEMIARGQFILDTFGEnas--hvAFLVDgFVAGPTAVTTCRRNFPDT--FLHYHRAGHGAI 294 Magnetospiril...
Q3IX55         219 QDETGEAKLFSANITADDHYEMVARGEYILETFGEnad--hvAFLVDgYVTGPAAITTARRQFPRQ--FLHYHRAGHGAV 294 Rhodobacter s...
WP_013292022   228 QQETGQAKLFSANITADYYKEMIHRGDFVLETFAKynsashvAFLVDgFVTGPAGVTTCRREFPDT--FLHFHRAGHGAV 305 Gallionella c...
BAN68648       221 QDETGEAKLFSANITADDHSEMIARGEYILETFGEfad--hvAFLVDgYVGGPGMITTARRWFPNQ--YLHYHRAGHGAV 296 endosymbiont ...
5HAT_J         316 TSpQSKRGYTAFVLSKMARLQGASGIHTGTMgFGKAEGEAA------DRAIAYMITEDAADGPYFHQEWLGMNPTTPIIS 389 Rhodopseudomo...
A1B2Q2         305 TR-QKNHGISFRVIAKWLRMAGVDHLHCGTA-VGKLEGDPLtvqgyyNTCREMVNEVDLPRGIFFEQDWGNLKKVMPVAS 382 Paracoccus de...
EON24481       303 TR-QKTHGVSFRVISQWCRLMGVDHLHAGTV-VGKLEGDPAttrgfyDTLREDKVATNLENGIFFDQDWASMPGVMPVAS 380 Nocardioides ...
WP_009153612   300 TR-QKSHGVSFRVIAKWMRLAGVDHIHAGTV-VGKLEGDPNtvrgfyDTLRLDKVAADPVKGLYFDQDWASLPGVMPVAS 377 Saccharomonos...
jgi:Marme_1595 266 NE-RSDWGISFHVWQKVWRLLGIDHLQINGIdGKYWQDNDSvie----------------afrSTVSPLGELTPTLPVFC 328 Marinomonas m...
Q2RRP5         295 TSpQSKRGYTAFVHCKMARLQGASGIHTGTMgFGKMEGESS------DRAIAYMLTQDEAQGPFYRQSWGGMKACTPIIS 368 Rhodospirillu...
Q2W3S5         295 TSrQSKRGYSVLVHMKMARLLGASGIHTGTMgYGKMEGAPD------EKVVAYMLERPTAEGPHYRQDWGDMRACTPIIS 368 Magnetospiril...
Q3IX55         295 TSpQSMRGYTAFVLSKMARLQGASGIHTGTMgYGKMEGEAA------DKIMAYMLTDEAAEGPFYRQDWLGLKATTPIIS 368 Rhodobacter s...
WP_013292022   306 TSyKSPMGMDPLCYMKLVRLMGASGMHTGTMgYGKMEGHGK------ETVLAYMLERDECQGPYFYQKWYGMKATTPIIS 379 Gallionella c...
BAN68648       297 TSpSSKRGYTAFVLAKMSRLQGASGIHVGTMgYGKMEGDAD------DRVIAYMIERDSVDGPVYHQEWYGMKPTTPIIS 370 endosymbiont ...
5HAT_J         390 GGMNALRMPGFFDNLGHs-NLIMTAGGGAFGHVDGGAAGAKSLRQAEQCWK----QGADPVEF--------AKDHREFAR 456 Rhodopseudomo...
A1B2Q2         383 GGIHAGQMHQLLDLFGD--DVVLQFGGGTIGHPMGIQAGATANRVALEAMVlarnEGVDLKTEgpevlrraAKWCKPLEA 460 Paracoccus de...
EON24481       381 GGIHAGQMHQLLDLFQD--DVILQFGGGTIGHPYGIAAGAEANRVALEAMVkarnEGKDLLREgadvlrnaAKTCQPLEA 458 Nocardioides ...
WP_009153612   378 GGIHAGQMHQLLHYLGE--DVVLQFGGGTIGHPMGIAAGATANRVALEAMIkarnEGRDYLAEggdilkaaAKRSRELDI 455 Saccharomonos...
jgi:Marme_1595 329 SGQWGGQVPETYRCTGQstDLMYLGGGGIHGHPMGAVGGVKAIRQAWDASL----KDQSLEQY--------ALTHPELAQ 396 Marinomonas m...
Q2RRP5         369 GGMNALRMPGFFENLGNa-NVILTAGGGAFGHIDGPVAGARSLRQAWQAWR----DGVPVLDY--------AREHKELAR 435 Rhodospirillu...
Q2W3S5         369 GGMNALRLPGFFDNLGHs-NVIQTSGGGAFGHKDGPVAGALSLRQAHEAWM----RGISLVEY--------AQGHPELRG 435 Magnetospiril...
Q3IX55         369 GGMNALRLPGFFDNLGHs-NVIQTSGGGAFGHLDGGTAGAKSLRQSHEAWM----AGVDLVTY--------AREHRELAR 435 Rhodobacter s...
WP_013292022   380 GGMNALRLPGFFQNLGHg-NVINTCGGGAFGHIDSPAAGGISLGQAYDCWK----SGSDPIEY--------AKTHKEFAR 446 Gallionella c...
BAN68648       371 GGMNALRLPGFFENLGHg-NVINTAGGGSYGHIDSPAAGAISLRQAYECWK----AGADPIEW--------AKEHKEFAR 437 endosymbiont ...
5HAT_J         457 AFESfpqdadklypnW 472 Rhodopseudomonas palustris
A1B2Q2         461 ALDV-----------W 465 Paracoccus denitrificans PD1222
EON24481       459 ALST-----------W 463 Nocardioides sp. CF8
WP_009153612   456 ALST-----------W 460 Saccharomonospora marina
jgi:Marme_1595 397 AITF-----------F 401 Marinomonas mediterranea MMB-1
Q2RRP5         436 AFESfpgdadqiypgW 451 Rhodospirillum rubrum ATCC 11170
Q2W3S5         436 AFESfasdadrlypgW 451 Magnetospirillum magneticum AMB-1
Q3IX55         436 AFESfpadadkfypgW 451 Rhodobacter sphaeroides 2.4.1
WP_013292022   447 AFESfpkdgdklfagW 462 Gallionella capsiferriformans
BAN68648       438 AFESfphdadalypgW 453 endosymbiont of unidentified scaly snail isolate Monju
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