Conserved Protein Domain Family
Bdr_N_group2
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NF040500: Bdr_N_group2 
Bdr family repetitive protein
Bdr (Borrelia direct repeat) proteins have an N-terminal domain, a variable length region of repeats, typically 11 amino acids long with a KID repeat, and a non-repetitive C-terminal domain. This HMM describes the conserved N-terminal domain of families other than BdrA, BdrB, and BdrC, which are described by sister model NF040499.
Links
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Statistics
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PSSM-Id: 439722
Aligned: 11 rows
Threshold Bit Score: 58.5959
Created: 11-Oct-2024
Updated: 3-Dec-2024
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_120104884   1 MINLAYKQMpEYKYVKQAFIEKGFEEDIIESFLLLNLVYSDDNVKDKI 48  Borrelia turcica
WP_120104626   1 MSNFAYEHVpEYEYVKQVFLDKGFPEEVIQYVLFRNANYHYENLEIRM 48  Borrelia turcica
WP_012686327   1 MSNFACEAKpKYEYVKQVFLDKDFPEDVVDYVLLRSSNYVYENLESSM 48  Lyme disease spirochete
WP_012686716   1 MNNSTYRTY-NIESIKDEFFNIGLSKEAIDFVFLHNDNYNFEFLKEKI 47  Lyme disease spirochete
WP_010883862   1 MNNLANRTF-NIGNIKNEFLEIGFSEEAIDFVFLHNDNYNFEFLKEKL 47  Borreliella
WP_014017750   1 MNSLTYRTY-NIESIKNEFLKIGFSEEAIDFVFLHNENYNYEVLKEKL 47  Borreliella bissettiae
WP_012686669   1 MRNLVHRTY-DIESIKNEFLNIGFSEEAIDFVFLHNDNYNYEVLKEKI 47  Lyme disease spirochete
WP_123772088   1 MSNLAYNAV-KIENIRLEFLNKGFSEEAIDFVLLQNDNYNFEVLKEKM 47  Borreliella
WP_024654654   1 MNNLAYRTY-KTEDLRVEFIEKGFSEAAVDFILFHNDNSHFEVLKEKM 47  Borrelia hispanica
WP_025420084   1 MNNLA--AY-KTEDLRNEFISKGFSEEAVDFILLHNDNSNYEILREKM 45  Borrelia anserina
WP_088895078   1 MGNLAYKIY-RTEDLRNEFLHKGFTEEAVDFILLHNDNSNFEVLREKM 47  Borrelia turicatae
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