Conserved Protein Domain Family
Bdr_N_group1

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NF040499: Bdr_N_group1 
Bdr family repetitive protein
Bdr (Borrelia direct repeat) proteins have an N-terminal domain, a variable length region of repeats, typically 11 amino acids long with a KID repeat, and a non-repetitive C-terminal domain. This HMM describes the conserved N-terminal domain of families designated BdrA, BdrB, and BdrC. A related but non-overlapping model, NF040500, describes the N-terminal domain of additional Bdr families.
Statistics
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PSSM-Id: 439721
Aligned: 10 rows
Threshold Bit Score: 73.1578
Created: 11-Oct-2024
Updated: 3-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_038365129   8 ITQQMVISELIKAGINREIAIDLSYRYYKNELTYKDLEYLENTFNLMLDKVE 59  Borrelia coriaceae
WP_025409014   9 ITRQMVLNELIKAGINRDIADDLSYRYYRNELTHKDLEYLETNFNLKLEKVE 60  Borrelia coriaceae
WP_024654412  10 ITRQMVLNELIKAGINKEIADDLSYRYYKNELTHKDIEYIKENFDIKLKHLE 61  Borrelia hispanica
WP_024652903   9 ITQKMVLSELIKAGIDKDVAKDLSFRYYRNELTHKDIEYLKENFDIKLEMLE 60  Borrelia persica
WP_038367505   9 VTRQMVLNELVKVGMDRDIADDLSYRYYKNELTTKDLELLKMAFKSDIRDLN 60  Borrelia duttonii
WP_051428600  19 VTEDMIYQEFVKMGMQDFVANDLSKRYYRNELTYKDIEYLESNFNLKLEMLE 70  Borrelia coriaceae
WP_120104901  16 ITQEVIYKEFVKLGMQEVIANDLSRRYYHNELTYKDLEYLGNKFDLKLEKLE 67  Borrelia turcica
WP_081462130  18 VSQEQIYKEFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFDIKFDNLV 69  Borreliella bissettiae
WP_120104870  15 ITEQQVYEELIRMGMDKPIAIQFANKYFYNELTQRDLENLEKNFNVRLKALE 66  Borrelia turcica
WP_120105032   6 ITEQMVIDEFVKIGFNEAIASDIANRYYHNEISYQDLLIIKMELKGDISDVK 57  Borrelia turcica
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