Conserved Protein Domain Family
rad_fix_GrcA3

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NF038360: rad_fix_GrcA3 
autonomous glycyl radical cofactor GrcA3
This small protein, like GrcA and GrcA2, is a lineage-specific small protein related to the glycyl radical active site-containing C-terminal region of pyruvate formate-lyase (PFL, also called formate C-acetyltransferase) from similar species. Because PFL is prone to damage and inactivation, this protein is made as a spare part that fills in for the portion of the protein that was damaged and lost. The distinct families we now call GrcA, GrcA2, and GrcA3 all have the surprising property of being much more closely related to some full length PFL than to members of the other GrcA-series families.
Statistics
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PSSM-Id: 439653
Aligned: 26 rows
Threshold Bit Score: 148.737
Created: 11-Oct-2024
Updated: 3-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_009462180  3 VNQQQIDNLVNMLDGYVEQGGHHLNVNVFTRETLLDAQKHPENYPQLTVRVSGYAVNFIKLTKEQQDDVISRTFHEGM 80  unclassified Lachn...
WP_002848690  6 PTDTQVDNLIGLLDGYAEKGGHHLNVNVLNRETLLDAQAHPEKYPQLTIRVSGYAVNFVKLTKEQQDDVISRTFHESL 83  Ruminococcus albus
WP_016290652  2 SNSAQVDNLVNLLDGYAEKGGHHLNVNVLNRDMLLDAQKHPENYPQLTIRVSGYAVNFIKLTPEQQADVISRTFHEAI 79  eubacteria
WP_009251948  3 ANSAQIDNLVSLLDGYAEKGGHHLNVNVLNRETLLDAQKHPEKYPQLTVRVSGYAVNFIKLTPEQQADVISRTFHEAL 80  Eisenbergiella tayi
WP_005363253  3 ASEKQIDNLVSLIDGYAQEGGYHLNVNVLNRDTLLDAQKHPEKYPQLTIRVSGYAVNFIKLTKEQQDDVIHRTFHGSL 80  Eubacterium ventri...
WP_019239338  6 VPQSQADNLVSMIDAYAQKGGHHLNVNVFNRDTLIDAQQHPEKYPQLTIRVSGYAVNFHNLTKEQQDEVISRTFHEQM 83  Enorma
WP_012808741  6 VASEQIDNLVNMIDGYAEEGGHHLNVNVFTKDTLLDAQAHPEKYPQLTIRVSGYAVKFNSLTKEQQDDVISRTFHDAL 83  Lancefieldella par...
WP_002562875  6 VAPSQVDNLVNMLDGYVAEGGHHLNVNVFTKDTLLDAQAHPEKYPQLTIRVSGYAVKFNSLTKKQQDDVISRTFHEAM 83  Atopobium
WP_006304114  3 ASKEQIDNLVNMIDGYAEKGGHHLNINVFNRDTLLDAQKHPEKYPQLTIRVSGYAVKFTTLTKQQQDDVISRTFHDSL 80  Fannyhessea vaginae
WP_006234861  6 VSETQADNLVHMLDAYAEKGGHHLNINVFNRETLLDAQAHPEKYPQLTIRVSGYAVNFHTLTKEQQDEVIARTFHDKF 83  Collinsella
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