Conserved Protein Domain Family
cyt_ox_assem_30

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NF038351: cyt_ox_assem_30 
cytochrome oxidase small assembly protein
Members of this family are small proteins, averaging about 40 amino acids in length as predicted, with a conserved core region just 30 amino acids long. The conserved region contains a highly hydrophobic probable transmembrane alpha helix. Members regularly are found encoded in the context of much larger cytochrome oxidase complex subunits, in members of the Burkholderiales such as Bordetella pertussis and Burkholderia sp.
Statistics
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PSSM-Id: 439645
Aligned: 39 rows
Threshold Bit Score: 31.6784
Created: 11-Oct-2024
Updated: 3-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015064813  6 RRRNRNIALILLALVAAVFVWTFIRGAVLF 35  Bordetella
WP_015867160 10 KRNNRRMGLTLASIAVLFFLGFLVRMIWFS 39  Variovorax paradoxus
WP_174862902 21 RQRNARMAWILASIAATFFIGFVAKMAWLG 50  Comamonas jiangduensis
WP_180692935 18 RSANLRLALILASVATVFFVGFVAKIALLG 47  Sphaerotilus sulfidivorans
WP_172591853 23 RQKNLRMALILASIAAVFFVGFVAKMALLH 52  Comamonas
WP_006297794  8 KKANVRLGLILASVALVFFCGFVAKFVFFG 37  Hylemonella gracilis
WP_013596169  7 KKANLRMAIILASIAVAFFIGFMVKMAWRL 36  Paracidovorax
WP_003075487  7 RKANRRLGLILASTAAVFFIGFVVKMAWLH 36  Comamonas
WP_010459319  8 KKSNLRMALILASVAVVFFVGFMVKVVLLS 37  Acidovorax
WP_156901259 19 RRSNLRLALILVSVAAAFALGFVAKIVLLG 48  Azohydromonas australica
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