Conserved Protein Domain Family
YPDG_rpt

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NF038186: YPDG_rpt 
YPDG domain-containing protein
The YPDG domain may occur once in a protein, or up to 22 times in tandem repeats. It is common in proteins of Gram-positive bacteria with C-terminal LPXTG sites for anchoring on the cell surface.
Statistics
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PSSM-Id: 439498
Aligned: 35 rows
Threshold Bit Score: 69.3201
Created: 11-Oct-2024
Updated: 3-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011014678  155 IYYGIESTGYPKv-RNGQTVKIPlRVTDGGTGAVG-GVPQGSKvvrdrYGsIEN--AELMGAIILIDEKTGDLTFTAPDD 230  Corynebacteri...
BAB99215      159 FYYSVQSIDSQRv-RNGQSIKVP-MTVIAGDGAIG-GVPQGAKvvrdrYGsVED--AELMGATIVIDEKTGELTFTAPED 233 
WP_070840158  534 VHGAPEYPKVEK--TPGQNATLKpKKD---------DVPGGST-----YEiTPG--QDLEEWNPQIDAKTGDITVTVPKT 595  Corynebacteri...
WP_148820350 1124 WESEPSYPVQTV--YPGETATLPvDLKKPENI----NVAKENP-----YK-LGD---VPTGWGATIDDN-GQITATAPAD 1187 Corynebacteri...
WP_083312607 1126 WEANPTYPEETV--YPGETATLPvALDKPENV----NVAKENP-----YK-LGD---VPTGWNVSIDDN-GQVTATAPAD 1189 Corynebacteri...
WP_186366028  345 ELHEVTYGGVDV--TGGESVTASpTET---------DLPAGTR-----ITlGDNiaLNAAGWTFKVTAD-GGLTATAPND 407  Corynebacterium
WP_162288212  748 DSVDPKYEVTSA--VVGASATSKaPTFTNADGTA--ATPDVAS-----YA-LGK--DAPAG--ASVDAKTGVVSYTPVVa 813  Bifidobacteri...
WP_081092052  967 EKYPVSYDKLNVekPSGDT-----PATGAVDPKAAaDMPEGAI-----TGyEKGdfDAPAGVTIDVNHDTGKVTASVGKN 1036 Lactobacillus...
WP_005722253  970 EKYPVSYDKLNVekPSGDT-----PATGAVDPKAAaDMPEGAI-----TGyEKGdfDAPAGVTIDVNHDTGKVTASVGKN 1039 Lactobacillus...
WP_101595608  514 DFYRPAYKPVTV--KAGETGKVEpPKDPTR------SLPQGTKf----YKePAS--TIPWA---KVDKNTGEITLTPDRT 576  Actinotignum ...
WP_011014678  231 -RTG-QLWFRTEVTFPDGSDSEVQYVIEV 257  Corynebacterium glutamicum
BAB99215      234 -RTG-QMWFAAELIYPDGTYSEVHYLFEV 260 
WP_070840158  596 aKDGdEKIINVTVTYPSGKTDVVPAKVTV 624  Corynebacterium sp. HMSC070H05
WP_148820350 1188 aKPGdQVKIPVTVTYEDGSTDTAYAVVNV 1216 Corynebacterium urealyticum
WP_083312607 1190 aKPGdQVKIPVTVTYEDGSTDTAYAVVNV 1218 Corynebacterium sp. HMSC059E07
WP_186366028  408 -ADG-TVEIVLTVTYPDGTTEPATAKVTA 434  Corynebacterium
WP_162288212  814 -DAGkAVDVPVTVTYADKSTDDAVAVFQV 841  Bifidobacterium italicum
WP_081092052 1037 aTLG-SFEVPVKVTYSDGTYAEVKVPVSI 1064 Lactobacillus gasseri
WP_005722253 1040 aTLG-SFEVPVKVTYSDGTYAEVKVPVSI 1067 Lactobacillus crispatus
WP_101595608  577 tNPN-DYSVPVKVVYPDNTTSVIVAPVKV 604  Actinotignum timonense
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