Conserved Protein Domain Family
lanthi_III_b

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NF038159: lanthi_III_b 
class III lanthipeptide
Members of this family are class III lanthipeptides, most likely active as lantibiotics. They average about 43 amino acids in length, with two conserved Cys residues, the second of them often appearing as the final residue. The family lacks the GlyGly motif that many other RiPP precursors have as the cleavage site between leader peptide and core region. The designation III_b indicates that it is the second family defined here with no characterized member but with members in the collection of putative class III lanthipeptides reported by Walker, et al. (PMID:32493223). The family has some overlap with the SapB/AmfS family of class III lanthipeptides (NF033212 ) and with the lanthi_III_a family (NF038154).
Statistics
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PSSM-Id: 439474
Aligned: 43 rows
Threshold Bit Score: 37.8606
Created: 11-Oct-2024
Updated: 3-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_156319412     3 NKILDLQKFETRSKVG---------HKKSLVSIA--CGNg---STVSLFAC 39  Secundilactobacillus paracollinoides
1_ncbifamImport  1 EHVLELQALETPEALEghdgldhhgHDHSHLSLH--CGY----SGLSLLLC 45 
SCM12502         2 TKILNLQKSTNSEDVRn--------KVQSNLSIG--CLNr---SNLSLYFC 39 
WP_099571766     2 NEILQMQALYVEETERt--------AGASSVSVAfsCKKf---SSISLLIC 41  Bifidobacterium sp.
WP_129311551     1 MALLDLQTLEIPEEEGl-------dHYPSAYSRR--CGV----STLSLLLC 38  Streptomyces sp. L2
WP_098511993     2 EHVLGLQGLETPEAVEg-------hHGGSHLSID--CDHdnhfSGLSLLLC 43  Amycolatopsis
WP_020658750     2 ENVLDLQALEAPEALEsqgl-dhhcHGHSHFSLH--CGD----STLSLLLC 45  Amycolatopsis benzoatilytica
WP_095213858     2 EHVLELQALEAPESQGld------hHGHSHCSTE--CGE----STLSLLLC 40  Amycolatopsis sp. M39
WP_157247321     2 THVLDLQRLTNPDADAer-----avAGNSSISFTl-CGDs---STLSVLLC 43  Nonomuraea typhae
WP_164743347     2 NNVLELQKLELKDHAMaa------hPISTSSLFS--CTE----STISFLNC 40  high G+C Gram-positive bacteria
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