Conserved Protein Domain Family
lanthi_I_FDLD

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NF038155: lanthi_I_FDLD 
FDLD family class I lanthipeptide
This HMM finds a broad collection of putative class I lanthipeptides with a well-conserved motif FDLD near the N-terminus, and poorly conserved but typically Cys-rich core peptide regions. Some members belong to the more narrowly defined family of gallidermin/nisin-like lanthipeptides.
Statistics
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PSSM-Id: 439470
Aligned: 75 rows
Threshold Bit Score: 23.4532
Created: 11-Oct-2024
Updated: 3-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15_ncbifamImport  1 NAFDLDARIstpaagsAGEQAPPPSISVIATRTICTKVAC 40 
1_ncbifamImport   1 NLFDLEIKKd------NVENNNELEAQSLGTAIKATKNAC 34 
2_ncbifamImport   1 SEFDLDPKVg-----aSSGNASPQTTPVFGLTFKLTVKVC 35 
8_ncbifamImport   1 NIFDLDINKkm----eSTSEVSAQTWATIGKTIVQSVKKC 36 
9_ncbifamImport   1 ELFDLDINKkm---etSTEMTAQTVPTILISRTICKTLTC 37 
10_ncbifamImport  1 ELFDLDINKkme--ssTEMTAQTLTTIVRVSRAVCRTGTC 38 
67_ncbifamImport  1 QDFDLDVRVav----aPVQDTAQGFASIGSTCWSCDNASC 36 
68_ncbifamImport  1 DQFQLDVRVmqa--prGAEQPDAATTSFVTTCWSCS--RC 36 
73_ncbifamImport  1 DQFDLDVRV-------VTPGEQHDVEPMTFTQVMCSL-RC 32 
74_ncbifamImport  1 DQFDLDIRVsg---pnERADVEGASLSVFACSLRCTIVGC 37 
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