Conserved Protein Domain Family
histone_lik_HC2

?
NF038052: histone_lik_HC2 
histone H1-like DNA-binding protein Hc2
This model describes highly repetitive, Lys and Arg-rich histone H1-like protein Hc2, as found in the genus Chlamydia.
Statistics
?
PSSM-Id: 411644
Aligned: 5 rows
Threshold Bit Score: 111.909
Created: 19-Oct-2021
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_009872343   1 MLGVQKKRSTRKTAAR--KTVVRKPAAKKTAAKKAPVRKVAAKKTVARKTVAKKTV---AARkpvakkatakkapvrkva 75  Chlamydia trach...
WP_009873517   1 MLGVQKKRSTRKTAAR--KTVVRKPAAKKTAAKKAPVRKVAAKKTVARKTVAKKTV---AARkpvakkatakkapvrkav 75  Chlamydia trach...
WP_015506216   1 MLGVQKKRSTRKTAAR--KTVVRKPAAKKTAAKKAPVRKVAAKKTVARKTVAKKTV---AAR------------------ 57  Chlamydia trach...
WP_010232112   1 MLGVQKKRSTRKTAAR--KTVVRKPAAKKTAAKKASVRKVAAKKTVARKTVAKKAV---AAR------------------ 57  Chlamydia murid...
WP_014947096   1 MLGVQKKRSSKKTATKavRKPARKATAKKTATRKPAVRK-AVRKTVAKKTTARKTVrktTVR------------------ 61  Chlamydia psittaci
WP_009872343  76 akktvarktvakktvaalKPVAKKATAKKA----PVRKVAAKKTVARKTVAKKTV---AALKPVAKKA------TAKKAP 142 Chlamydia trach...
WP_009873517  76 akktvarktvakktvaarKPVAKKATAKKA----PVRKVAAKKTVARKTVAKKTV---AARKPVAKKA------TAKKAP 142 Chlamydia trach...
WP_015506216  58 ------------------KPVAKKATAKKA----PVRKVAAKKTVARKTVAKKTV---AALKPVAKKA------TAKKAP 106 Chlamydia trach...
WP_010232112  58 ------------------KPAAKKTAAKKA----PVRKVAAKKTVARKTVAKKAV---AARKTVAKKSvaarktAAKKAP 112 Chlamydia murid...
WP_014947096  62 ------------------KTVAKKTTAKKAatrkPAVKKAVRKTAAKKTTVRKTVrktTARKTVAKKA------TAKKTA 117 Chlamydia psittaci
WP_009872343 143 VRKVAAKKTVarktvakktvaalkpvAKRVASTKKSSVAVKAGVCMKKHKHTAACGRVAASGVKVCASAAKRKT-NPNRS 221 Chlamydia trach...
WP_009873517 143 VRKAVAKKTV----------------AKRVASTKKSSVAVKAGVCMKKHKHTAACGRVAASGVKVCASAAKRKM-NPNRS 205 Chlamydia trach...
WP_015506216 107 VRKVAAKKTVarktvakktvaalkpvAKRVASTKKSSVAVKAGVCMKKHKHTAACGRVAASGVKVCASAAKRKT-NPNRS 185 Chlamydia trach...
WP_010232112 113 VRKVAAKKTVarktvakkavaarkpaAKRTVSTKKTAVAAKAGVCMKKHKHTAACGRVAASGVKVCASSAKRRT-HHNRS 191 Chlamydia murid...
WP_014947096 118 TRKPAVRKTVrktvakk--ttalkpaARK-------AVAKPAMSCHKHHRHTASCQR-------VCASSAKRRCgSKSRV 181 Chlamydia psittaci
WP_009872343 222 RTAHSWRQQLMKLVAR 237 Chlamydia trachomatis
WP_009873517 206 RTAHSWRQQLMKLVAR 221 Chlamydia trachomatis
WP_015506216 186 RTAHSWRQQLMKLVAR 201 Chlamydia trachomatis
WP_010232112 192 RTAHSWRQQLMKLVAK 207 Chlamydia muridarum
WP_014947096 182 RTAHGWRQQLMKLVAR 197 Chlamydia psittaci
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap