Conserved Protein Domain Family
ABC_perm_DarB

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NF038008: ABC_perm_DarB 
darobactin export ABC transporter permease subunit
Statistics
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PSSM-Id: 411601
Aligned: 22 rows
Threshold Bit Score: 808.42
Created: 20-Oct-2021
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_032906835   6 FINDVKLspMASILAIIITALGMLSSFLVLLLYLTDRSIESYHNDhtQIYRIETQFNLPNGDDVKSAQVPFPLIPALQNA 85  Yersinia interm...
WP_010604506   4 LLSDGKA--LSAVTGVLSLSLGAVLLGLMFIFFLADSSINSGLSS--DIYKIETQFNLPSGETVVSSKAPAALIPVLEKD 79  Pseudoalteromon...
WP_017100166   4 TFTSPKI--LSSITGMFSISLGTVLLGVMLVFMWSDHDINSQISE--TVFKIETQFNLPNGDHVKSSKAPAALLSKLREH 79  Vibrio
WP_046357642   4 FLSSPKG--LSAITGIFSLSVGTILLGFMFAFVIANNAINNTIAD--NVYKIETQFNLPNGEQVNSSQSPAALVPVLSSR 79  Pseudoalteromon...
KOY63208       6 LSKSMKRfnIS--VSILSVSIAILALYLLSTAFYSDTQIDNYYQDnsNLYRIETTFNLPNGEKVRSAKSPLPLIEELRKD 83  Photorhabdus he...
WP_146748032   6 ISKSMKRfnIS--VSILSVSIAILAIYLLSTAFYSDMQVDNDYQNnsSFYRVETTFNLPNGEKVRSAKSPLPLIDELRKD 83  Photorhabdus
WP_049632710   6 FFSDLKLspIPSILAIIITAIGLLSSFLVLLLYITDNRIDKYHDDyqSIYRIETQFNLPNGDEVKSARAPLPLISALQND 85  Yersinia aldovae
WP_019210582   6 FLNDVKLspMTTILALAITALGMVSSFLVVLLYVTDSGIEKHHVNyeQTYRIETQFNLPSGDSVKSAQVPLPLLSVLQNE 85  Yersinia massil...
WP_004876304   6 FFNDVKLspMASILAITITTLGMVSSFLVLVLYLTDNNIEKHHSHysQTYRLETQLTLPSGDKITSAQVALPLLSVLKNE 85  Yersinia mollar...
WP_025420788   6 YLDDIKIspVSALLAVVITAFGFVCAFLVLLLFLQDQRTDRFSAEydRLYRIETRFTVPGGDVIRSARVPLPLADVLQRA 85  Sodalis praecap...
WP_032906835  86 KNIKEVIYALRLFTDLQVNDQTHRKVEIYAVSPNFFNVINPyklsndqpnlyepnisqYRPHLTQNEIIITPEFNRQYLH 165 Yersinia interm...
WP_010604506  80 QAVKRVGKVYRENITILYNDIELKGIEVYALDKTAQLMLNL-----------------GSEELGISGAFISSTLAEKIAE 142 Pseudoalteromon...
WP_017100166  80 PQVKSVGRVKSELVTISYGTEEVKSADVLAMDESARKMLKLdn--------------dGEFAMSSNGVYLSEPFAKKLTR 145 Vibrio
WP_046357642  80 DDIERVGLAHRETINVLHNTNEIKSAQVYALNEAAFNMLSLsp--------------nGISAVENNEVYLSSTFARQLTN 145 Pseudoalteromon...
KOY63208      84 ARVNHVDYIFKLNTTIELQGKKITKVPVFAVSHEFLNTLSPfk--------------kADNTLGANEIYITKDFNNRYLG 149 Photorhabdus he...
WP_146748032  84 ERISHVNYFFKLNTTIELKGKKITKVPVFAVNDEFLNTLSPfk--------------kVDTSLGANEIYITEEFNNHYLG 149 Photorhabdus
WP_049632710  86 KNIKRVDYVLRLFLNLQVKNRTYSDVEIYAVSDGFFSTLNPyq--------------lHPPKLSMNEIIITPEFNQQYLK 151 Yersinia aldovae
WP_019210582  86 NDIKETAFALRLFMNLHAKGQTHTQVDIFVVSPNFFNVITPyk--------------gKIPNLTQNEIIITPEFNDQYLQ 151 Yersinia massil...
WP_004876304  86 KNIQKIAYTFRLFTNLQVNARVYNKVDIYAVSPNFFNIVMPys--------------qKIPPLARNEIIITPEFNRQYLQ 151 Yersinia mollar...
WP_025420788  86 PQVEAVGFAYRFFSDIQTAERRVPRVELFAVSPEFLGLINPfq--------------qAITPPRENEIYITPEFNRRYLG 151 Sodalis praecap...
WP_032906835 166 LDNP-VGHVITLGNKGQFVIKDMVSLHKDSRFKTNAVIAFSPELIDGYHDKRHDWYDMHAYAFITMda--gGKPNSEQLN 242 Yersinia interm...
WP_010604506 143 DKSKiIGKTIKINNTGLYRIEKVIKIDDTLSIQPDVIVNFDHLYNGKIKESYTDWYDTHLHLFVEL-----VNRNDLDLE 217 Pseudoalteromon...
WP_017100166 146 SPRSlIGKRLKLNGLGLYQVEGIIKLDKRSSIRPDMIIAFSPTYDSVIKSQYDNWYDTHVDVFVDL-----KNKTPLNLN 220 Vibrio
WP_046357642 146 NHTTlTGQTLKLGQLGQFKITQVIELDERLSIQPDLMIALASTYGQKIQSHYDNWYDTHIHLFVEL-----AQGNSLNLE 220 Pseudoalteromon...
KOY63208     150 LEDP-KGKSITLDNE-TYIIKDILERRHDSSLNMDAIISFKPNLIKDYNKEIFNWYDTHAYIFVKFtdkntIFNKDTFLK 227 Photorhabdus he...
WP_146748032 150 LEKP-KGKSLVLNNE-TYIIKDILERRRDSSLNIQAIIAFKPTLIKDYNKELFNWYDTQAYVFIKFanekaISNLNALLK 227 Photorhabdus
WP_049632710 152 FDNP-KGHTIILGNKGTFVIKEVMSLNKASRFKTGAVIAFSPDLLDGYHEKRHDWYDTHAYTFITLla--qATPSIEQLK 228 Yersinia aldovae
WP_019210582 152 LDNP-RGHIITLGDKGQYVIKEVVEFVNTNRLNVQAVIAFSPELIEDYHDKRHDWYDMHAYAYITMkp--sGKPSNDRLN 228 Yersinia massil...
WP_004876304 152 LDNP-KGQIITLGGKHQYVIKEVVELNNASRFNTQAVIAFSPEMIDGYHDKRHDWYDMHVYAFVTIep--gTKLTTEQLN 228 Yersinia mollar...
WP_025420788 152 FETP-VGKAVQLAGKGMFIIKGVVQPQPASSLVMQAMVAFSPSLMEAYYARRGDWYSTQVYTFARMqt--rAPPDDGLLR 228 Sodalis praecap...
WP_032906835 243 TLVTRYAPQLPGAPF--SPEEFIQLSARNITDIHYDNGLPDEISTVIAKSYLYSLYAAGIFIFITTTMNFFNVNNVINTN 320 Yersinia interm...
WP_010604506 218 KIVSSNAPQIPGAPF--TPSSFINLSKRAVSDLHYDRNHPDALGITFSKSSLYLIFGICIFSFILGTVGFLSSIISIKIS 295 Pseudoalteromon...
WP_017100166 221 QIILENAPQIPGAPF--TPESFIQLSQRPISQLHYDLNFSDALGLTFSKSSLYLIYGVCVFSFLLGFVGFVSSMISIQLS 298 Vibrio
WP_046357642 221 QVVLEHAPQIPGAPF--TPSAFIHLSKRHLSQLHYDLGLPDELGTTFAKSSLYLIYGVCGFSFLLGCVGFLCSVASTQIS 298 Pseudoalteromon...
KOY63208     228 NIIETKASNLPGAPF--TASEFIHLSLKKLKDIHYQDKLPDEIAIGLSKEVIYSSYIAFAFILFAALTNYYNLTSADSSE 305 Photorhabdus he...
WP_146748032 228 HIIETKAPNLPGAPF--TASEFIHLSLKKLKDMHYQDGLPDEISIGLSKEIIYSSYIAFAFILFSALTNYYNLTSADSAE 305 Photorhabdus
WP_049632710 229 SLVIRYAPQLPGAPF--SPQEFIQLSARNIADIHYDDALPDEMSMVISKSYIYALYAAGIFVFFTTIMNFFNINSVIYTN 306 Yersinia aldovae
WP_019210582 229 ALVTQYAPQLPGAPF--SPEEFIQLSARPITDIHYDHELPDEMSKVISKAYIYTVYAAGIFISLVTIMNFFNLNNVINSH 306 Yersinia massil...
WP_004876304 229 TLITQHVPRLPGAPFivSPEEFIQLSARNITDIHYDNSLPDEMSTVISKSYIYTLYAAGIFIFLTTVMNFFNVNNVINSN 308 Yersinia mollar...
WP_025420788 229 EIVRRHAPPLPGAPF--TPSQFIHLSARPIDAMHYDGGYADEIATVISRPLLYTLYGAGAFVLVTTLINFFNLNGILHAA 306 Sodalis praecap...
WP_032906835 321 KKNSFQIKKSLGASRYQLLTESLSIALLQAFFVLLFAILFLIVLIQLSIGVKELIL---IQETKTLLASFFFTLISIYTA 397 Yersinia interm...
WP_010604506 296 QLDRIKTLTSIGGSEIQIIFISLLENKNSLIIANITSAILLYLILPPLSGEFDILStvnTEEKLFTLSLIIITITSLYTL 375 Pseudoalteromon...
WP_017100166 299 QVERIRTMLSIGGSYYQIILNALMERRIALLGGVVLSISIFNAGLFFLTEAFTFLSvlsTEVQWVMSVVMLICFVVVYVT 378 Vibrio
WP_046357642 299 HQERIKTLLSIGGSYGQIAVNALLDNKLTLLITTAISLFVFYFGSRFLSVEFPLLAiltPTNKWIISLSIVLVLIITYVS 378 Pseudoalteromon...
KOY63208     306 KRDIYQLKKALGASTFNIICDSLPTMLVRMVFSTLIFLLLIITIFNTSLYIKNLFYt-lEINNLIYLGVFSILIA--FIL 382 Photorhabdus he...
WP_146748032 306 KRDIYQLKKALGASTFNIIKDSLPSMLIRIIFSTLIFLLLIITIFNTSHYIKNIFSl-lEIKSLIYLGIFSIFIT--FIF 382 Photorhabdus
WP_049632710 307 KKNSFQIKKSMGASHTQLLAESFYIATIQTIFVLLVGVVILLYLIHSSDTIKILIL---EQENKVHLITFFSIFIAVYVT 383 Yersinia aldovae
WP_019210582 307 KKSSFQIKKSIGASHIQLLVESLTIATVQLILVFGLAIIFLAALMYFSVGFKELIL---MTEISQIYSSFITVLTFIYLA 383 Yersinia massil...
WP_004876304 309 KKSSFQIKKSVGASHAQLLTESFYIATLQTLCILISAIILLVILISLSINIKTLIL---IQGISYLWHALLPVLMSIYAA 385 Yersinia mollar...
WP_025420788 307 KRKGLYIRRALGAADSQLLRDSLASLLPQLLSIVIVSALLLLWLTAASQQVAALLL---TQPWTAIAAAFGLVTVVLVAI 383 Sodalis praecap...
WP_032906835 398 ILIshitYLYVTVFPNQSGHYNIYNQQPISRYVHQGALCIQITIAGIIVYLWAGILTQNNFMQHHNFGYEKDNIVTFTLS 477 Yersinia interm...
WP_010604506 376 SNV----FVIKRVLSYQSDESITKSTGLKTMWLTKVTVFLQMLITSIVIFIAVSLTYELFTEKKADYGYDIAKSHFIKLD 451 Pseudoalteromon...
WP_017100166 379 VIA----LVVSQAIALQEGQSISRFSDLNMVHITKFIMMIQIVITTMVIFISVSVTYELLSVKQVDYGYDIKRTHYAKLN 454 Vibrio
WP_046357642 379 IIC----LVIRNIVTVQNNQAISRSAGINTLWMTQLTIIIQTLVTAMVVFVASGVAYELFSAKKADYGYDINHTHYAKLD 454 Pseudoalteromon...
KOY63208     383 VSSihfsFSLRFYIYQRNRKMDMRYESTLSSWFRKSSLAIQLLVSGISIYLVTGLVNQYIHLVDVHTPYDNTKTISITIN 462 Photorhabdus he...
WP_146748032 383 ISSihfsFSLRFYIYQRNRKMDMRYESTLASWFRKSSLAIQLLVSGVSIYLVTGLANQYIHLVDLHTPYDNTKTISVAIN 462 Photorhabdus
WP_049632710 384 ILLshiiYLCVVVSPNRSSHSKTYNEQPLSRHLHQWTLCLQIIIAGVIIYLWAGVMTQNNFMQQQDFGYEKENIITFQLS 463 Yersinia aldovae
WP_019210582 384 VLLshliYLSTVVFPNHTNHSNTYNEQSLSRNLHQSLLCLQIIVASVIIFLWAGIMTQNDFMQHHHFGYEKANVITFPLS 463 Yersinia massil...
WP_004876304 386 VIAshltYLYVVVFPNPSSHSNYYNDQPLSRYIYQGLLCVQIIIAGVIIYLWAGIMTQNSFIQRHDFGYEKDNIITFPLS 465 Yersinia mollar...
WP_025420788 384 VLCshlsYFFLFVLCR--GGAVNRYETVVAWYTNRATLMLQLFVSGVIIAAWAGVVAQYHYVRTADFGYRVNGLLTFELN 461 Sodalis praecap...
WP_032906835 478 DelISQAAINSLQNELKNTVNIESiALSSWQPFDMSRTNTSIFHLNQQEKDKLVTVNTLNANKHFLDTWGVKVLaGYDNV 557 Yersinia interm...
WP_010604506 452 G--VNDVSPITLRNKINAEYGEVS-AVASWHPFEKSSHFVTVSTAQQKIDQNITPINYFYAGEEFIKVFGLNPL-DLDSI 527 Pseudoalteromon...
WP_017100166 455 G--RNDSKARYLRDRINAEQGQVS-EATSWYPFDRSVSYASVSTAQQTMDEKIIQAKYFYAGPEIVNILGLTVLtQNHAV 531 Vibrio
WP_046357642 455 G--HNDRLPTNIRDNINTNHGRVS-EVSSWRPFDKSANYITVSTAQQKLDEQLTPVHYFFAGPAISQVLALEVLnANQTT 531 Pseudoalteromon...
KOY63208     463 NdnNKKLSINELSYDLTSKYSTSKiTLSNWQPFDMSRDNITIYYSGQQDINNYISSNVIIADENFTDVWKMKILaGNDKR 542 Photorhabdus he...
WP_146748032 463 NdnSKKLAINELSYNLINQYNTSNiTLSNWRPFDMSRENITVYYSGQQNKNNYISSNVITADENFTNVWKMKILaGGNNR 542 Photorhabdus
WP_049632710 464 DelKKPESINSLQDKLKHAINISPlTLSSWRPFDMSKSVTSIFHSNQQEEDNLLIINTINANREFINAWGLKVLaGHNNT 543 Yersinia aldovae
WP_019210582 464 EqlKQPASLNNLQDEMKNSTGGGTlSLSSWLPFDHSKHSISIFHHNQQEKDKLASVNIIQANKNFIETWGLKTIaGRENL 543 Yersinia massil...
WP_004876304 466 DelSTTASINNLEDEFKRTIGVKAlSLSSWQPFNRSRHSSSISHQNQQEKDKLVSINILNANKNFVDVWGLKTLaGNEHT 545 Yersinia mollar...
WP_025420788 462 EavAATGALTRLKEALRREVGSGDiALSSWRPFDMSRSSLTVRHGRQQRQQAFTATAALYANCHFADVWGLETLgGSGAL 541 Sodalis praecap...
WP_032906835 558 L---IPSDDDNVVHAVATQSFMTLMGQHSYDETLNSIFYINDNDSEHKIRILRIINDFYLADVNKSTTPLLIFIENkpQR 634 Yersinia interm...
WP_010604506 528 IqsnYDSHINGKTRVVVTQAFANLYDNIPIEKLSMHKFYADLGNGVEEIEIVKVVSDFFLSKIKPFHDPIMIVLNE--EK 605 Pseudoalteromon...
WP_017100166 532 Pv-lREKDTSKRVFVIVTEAFSHLFANISAEKLIEHTFYTNLGDGVKEIQVVDVVSNFYLGKVKPSFEPIMIIIDE--TK 608 Vibrio
WP_046357642 532 LaldKINEVDGKTRVIVTQAFSNLFDNIPTDQLINHRFFADFGDGLTDIEIVQVVSNFYLGKVKADFDPIMIVLDD--TK 609 Pseudoalteromon...
KOY63208     543 I---YQSDNTDVVNALVTKEFLKQNGIIKYDDIFNNYYWYTIEGKKIQIRFIQIIEDFNLGAIDEPFKPIVIFIKKdqSK 619 Photorhabdus he...
WP_146748032 543 V---YQSDNANIVNALVTKEFLKQNVITQYDDIFNNYYWYIMEDKKIQIRFIQIIDDFNLGAVDEPFRPIIVFIKKdhSK 619 Photorhabdus
WP_049632710 544 I---KASENKNIYHAIATKSFMTAMKKSSYDEILNNVFYISDGNLEREVRILKVVNGFHLASKNGNSPPILIFIRDdiQR 620 Yersinia aldovae
WP_019210582 544 I---LASDDDDVGHAIVTKSFMATMGFSSFDKILNTDFYINHHGMDKKVRLLRVINDFYLSEPNEDFAPLLILIENkvQK 620 Yersinia massil...
WP_004876304 546 L---VPSDSDDLYHAIVTKSFISAMGFASYDEVLNTTFYIYSGDAQRKIRILSVVNDFYLAEQNEKVTPQLIFIEDktQQ 622 Yersinia mollar...
WP_025420788 542 ----TASQAPDVLHVIATRAFARQMGFATWDEVLSAPFYAEIDDKPFTLRVQRVVDDFYLGDLGAEPQPLLLFITDdrQQ 617 Sodalis praecap...
WP_032906835 635 YGALKLQYIQDIGEVKKTLERYRVNPTQIQTVEHlhqayFNTNRLMQKTANFVAILSLSLILISTVIISISETKRISKTL 714 Yersinia interm...
WP_010604506 606 ATSVLLNTSNRIVDRISINNKLDFSSSYAALESE-----YSDLSKIANYLLWVVALNIVLISLNTIANSLVDVERNSYTL 680 Pseudoalteromon...
WP_017100166 609 ANYLIVND----DATKVVLNDTTFISSLDARDEE-----YSDLSTIVIYLLFVIVLNIVLLLLNTMTNSLVEVERNRFSL 679 Vibrio
WP_046357642 610 TNTLLVNH----ENPASLFSQSPLIPSEQALDAE-----FSDLSKIVFYLLFVVILNIVLIAMNTIANSLVDVERHSDSL 680 Pseudoalteromon...
KOY63208     620 YASLNLNSINNLSAVFNELLAHGFDKNDINLTSDlfssyYDNYLKVIKLSSAVAIFSILLLIIACFTTSMTDFNHMKKEL 699 Photorhabdus he...
WP_146748032 620 YASLNLNDISHLAPVLKKLSEQGFDKNEIDLTSDlfyayYDNYLKVIKLSSAVAIFSILLLIIACFTTSMTDFNSMKKEL 699 Photorhabdus
WP_049632710 621 YGILKLQDKQDINIAKKILESYNINPEQIKTVKElhkehFRNNKSIQNIINIVTLISVTLILISTIIIGTSEYKRFEKTF 700 Yersinia aldovae
WP_019210582 621 YGALKVNQITDMTIVKSLLERHHVAPEKIKTVEHlhedyFSNSQLINKTVNTVTFIAILLITISTIIIGISETRRIKKTL 700 Yersinia massil...
WP_004876304 623 YGALKLQTSHDIAMTKRVLERYHITPEQIKSVNSlhqesLSSSKLIQTTVNNLTLLSMALILISTVIISMSETKRIEKTL 702 Yersinia mollar...
WP_025420788 618 YGALRVDNEDQMRRAKQVLAKQMLSPDGMQTVAElhaahFHDGRLMQHIIRLVALLSLSLMLLSAVIIGQSESRRLAKTL 697 Sodalis praecap...
WP_032906835 715 RIMESIGGSIYTHIVFFIQQNIAPIIFAAIIAFSMGFFLLHRWLVQYHAVDNLSYVNATATLFIFIISIVVIMTITLIFN 794 Yersinia interm...
WP_010604506 681 DIMKQLGAGLKDIFSYTLKNNIYLYTFSSLVGTCIGYYILKDNLLISDNFSFGFTSYIFSSMAIAAIFISVIILSFFVVS 760 Pseudoalteromon...
WP_017100166 680 SIMRQLGAGLKSICWYVFKNNILIYLGASGVGVLLGYAAISRKILALDGVQFGLSHYVMSLLVVAA-TIAFIISLSLVIS 758 Vibrio
WP_046357642 681 HIMKQLGADLTTIFSFVFKKNVYLYLASSLIGILLGYITLYQQLIPLEHMQFNFYHYALSLLVVATLIAFIISLNLGVIS 760 Pseudoalteromon...
KOY63208     700 SIMESIGGSIYTNLIHFLSKSVIPIIASIFIAYISGRTILVYLLGEYNVIYTDSFVYSALALSATMIFTVIIMITTYLMN 779 Photorhabdus he...
WP_146748032 700 SIMESIGGSIYTNLTHFLSKSVIPIIASIFVAYLLGRTILVYLLNEYSVIYTDSFVYSALALSATMIFTVIIMITTYLVN 779 Photorhabdus
WP_049632710 701 KIMDFIGGSFFTHIIFFIQQNITPIVIAAITSYPIGLLLLNKWLHQYSIVTHLSYAYATGAFLTFIVSILIVMTAVLISS 780 Yersinia aldovae
WP_019210582 701 MIMDAIGGSIYTHILYFIQQNILPIAIATVIAIPIGFLLLDLWLNQYDMINSLSYIYATAALLILFMSLIFVMSITLIIN 780 Yersinia massil...
WP_004876304 703 RIMDAIGGSIYTNIVFFIQQNIAPVFVAVIISLPAGQFLLNLWLNQYVIVNGLSYIYAMAALLAFIVTIIMVMCATLFFN 782 Yersinia mollar...
WP_025420788 698 AIMEALGGSTYTGFVYFLKQNGVPLALSLAAAGVAGWALLNRWLAQYERVTSLCYVWAFAALLALALGVVAVMSLTLVAD 777 Sodalis praecap...
WP_032906835 795 KD 796 Yersinia intermedia
WP_010604506 761 KK 762 Pseudoalteromonas flavipulchra
WP_017100166 759 RK 760 Vibrio
WP_046357642 761 KQ 762 Pseudoalteromonas luteoviolacea
KOY63208     780 YR 781 Photorhabdus heterorhabditis
WP_146748032 780 YR 781 Photorhabdus
WP_049632710 781 KK 782 Yersinia aldovae
WP_019210582 781 QH 782 Yersinia massiliensis
WP_004876304 783 NT 784 Yersinia mollaretii
WP_025420788 778 GA 779 Sodalis praecaptivus
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