Conserved Protein Domain Family
holin_1

?
NF035928: holin_1 
bacteriophage holin
Holins form transmembrane pores for releasing endolysins that hydrolyze the cell wall and induce cell death.
Statistics
?
PSSM-Id: 411517
Aligned: 19 rows
Threshold Bit Score: 147.387
Created: 19-Oct-2021
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_131958559  39 YIFDDWKFVGFLFVLVMLDTFFGTWKAIKYGGWRSLSFtqaERFIVKVFLYFGVLVLSHVLTSFTIHDKPNFLFTWIDVV 118 Dyadobacter psy...
WP_050444639  19 YVFGDWEFVKWLIVLVCVDTVLGFVKHWLSKDISSKAY---GMIGRKLFIYSCVLVLSHVMGNFSIAGQVVDSFVWFRYF 95  Bacteroides fra...
WP_073347945  26 YVFDDWEFVKWLAVLMAVDTALGVLKHWFTRDISSKGY---GMVGKKLIVYSAVMVLAHVLSCFTVHNQPVTTLQWFGSF 102 Bacteroides con...
WP_083571306  34 YVYSDWEFLKFLFVIVSVDTLLGFTKAVMEKKVSSKGF---GMVLKKLLIYTCLLVATSALTKFTISGAPQVAFSFLNNV 110 Chitinophaga sa...
WP_073285233  37 YLFDDWEFAGFLFTLIVVDTATGVLRSWRQHKVSSRAF---SRIFLKVLIYMVLLILAHVMTSFKVQGEENMVFKWFDTF 113 Hymenobacter ps...
WP_086597349  41 YLFSDWDFLSFLLVLILVDTVMGVQRSWKLRTVSSRGF---SRIFIKLCLYANMLILSHVMTHFTVRGNPNVLFQWFDYF 117 Hymenobacter cr...
WP_022821909  37 YFFADWQFAGFLCTLIFVDTVTGVLRSWQKHQVSSRAF---SRIFIKCLVYLLLLVLAHVMTSFTIKGKVNVVFQWFDTF 113 Hymenobacter no...
WP_028521954  37 YLFSDWQFVISLLIITHIDTILGVWLALRNQQLSSKGF---AGYFEKHIIYALFLIMCHVLTHLKIDGREVAFFQWVNNM 113 Runella limosa
WP_103914973  33 YIYQDWEFFKWIVVAISIDTLVSLVKHWMHKDISSEEFw--HKFAKKIFVYIMLLILSNLVNNYTVNGHLIGSTQWIGEY 110 Prevotella rumi...
WP_026946183  64 YIFSDWPFLIWLLVLIVLDTLLGFGFAVSRRQVSPGKL---AGIFIKFVVYGSLMILGHVLENFKVSDEAMPGGYYFKMV 140 Algoriphagus ma...
WP_131958559 119 LYGYMVAKESLSAARNINAIDPAYVPPFIIKRLNKFMG-SG 158 Dyadobacter psychrotolerans
WP_050444639  96 ACTALMVREALSIIENVEEICPGFFPKAIINKLKGFDNvSG 136 Bacteroides fragilis
WP_073347945 103 GCTILMVREGLSIAENIEAILPGFLPKSVVERLKDFASgKG 143 Bacteroides congonensis
WP_083571306 111 VFSAIMVREAISIFENVAEIEPGVLPGSILKYLQKFHSeTG 151 Chitinophaga sancti
WP_073285233 114 IYCAMMAREALSVLENLAAIEPTLIPKALLKRLAQFSE-DP 153 Hymenobacter psychrotolerans
WP_086597349 118 MYSCMMAREGLSILEHIAFIEPRMVPKALRLRLAVIAD-EG 157 Hymenobacter crusticola
WP_022821909 114 IYCAMMAREALSVLENLAAVAPELVPKKLVKRLALFSE-DP 153 Hymenobacter norwichensis
WP_028521954 114 FYVAILVREAISILEKVGAIKPNLIPSWILAYLKRFDA-SG 153 Runella limosa
WP_103914973 111 LCVFMLLREGISIMENVNAIMPVV-PAWLLRRLKDFND-KG 149 Prevotella ruminicola
WP_026946183 141 IYAGVIIVEAISIMRNLGKINKKLVPKFILKRFEGFNE-SG 180 Algoriphagus marincola
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap