Conserved Protein Domain Family
LapB_rpt_80
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NF033932: LapB_rpt_80 
LapB C-terminal region repeat
This model describes a tandem repeat about 80 amino acids in length per repeat, found in at least 12 different surface-exposed proteins of the pathogen Listeria monocytogenes, and in particular found 10 times in tandem in the surface protein LapB, for which the repeat is named.
Links
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Statistics
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PSSM-Id: 411491
Aligned: 15 rows
Threshold Bit Score: 61.6273
Created: 20-Oct-2021
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_010989464    1512 GQYQVQVNlADSSGNQAIPQTITINVV--DTvGPVIKAD-NVSYHVNTTKTEAEFFQDARLDVTdnnDDtTdlIITSNFA 1588 Listeria m...
WP_010989427     914 GEYEVTLT-SEKDGIQGDSCKVIVKVL--HG-APVISADqTISYDKHATITEKQFLEDIHASTD---LD-T--AITTNFS 983  Listeria m...
WP_010989427     992 GDYTVALNsENEDGVKAETVYVTVTVN--KDpAPIISAKtEITYDKFSKKTEAAFLDDIDADTNd---G-S--IVTSNFA 1063 Listeria m...
WP_010989427    1072 GDYTVTLNsINSDGVAGTPTAIIVHVE--KEkIATISTNtAQQYEKYAKINETQFLKDVHASINaspTT-A--VLESDFE 1146 Listeria m...
WP_010989427    1155 GTYTVTITaTNEDGGVSAPKEVSVIVR--KIpAPEITADkEITYPKFDEVSEAEFLNDIHATISd--KN-V--AITSNFS 1227 Listeria m...
WP_010989427    1319 mSYTVTLNaVNEDGISAEPVAVTVTIN--KEpAAALKADaEVSYAKNEAVTESDFFKDVHLEGTeapST-A--KATSNFD 1393 Listeria m...
WP_010989427    1402 GDYTVTINaTNEDGAVSTPIEVIVHIE--AEsAPVITANaEVKYNKHEQTDERRFLYDSEAKIDe--AN-V--EIKTDFA 1474 Listeria m...
1_ncbifamImport    1 YDFTTKITiLNINATYSGTVIQPLTK---DStRPIITADgKVSYPEGTTKTTTEFLTDIHATTDd---G-S--PIEVDLN 71  
2_ncbifamImport    1 GSYTVTLTaVDTAGNEATPVDVTIIITsvDTsKPVITADeKVSYPEGTTKTAAEFLTDIHATTDd---G-S--PIEVDLN 74  
3_ncbifamImport    1 GNYTVTLNaQNTKGLKGEPIQVTVTII--E--KTVITADpEVTYDLNEAITEEEFLAEIKATTNd---D-T--MITSDFE 70  

WP_010989464    1589 EKVNLNKP 1596 Listeria monocytogenes
WP_010989427     984 TAVNLNKG 991  Listeria monocytogenes
WP_010989427    1064 TAVNLDKA 1071 Listeria monocytogenes
WP_010989427    1147 TVVKLDVP 1154 Listeria monocytogenes
WP_010989427    1228 TDVNLNKA 1235 Listeria monocytogenes
WP_010989427    1394 SVVDRSKT 1401 Listeria monocytogenes
WP_010989427    1475 EKVDINKV 1482 Listeria monocytogenes
1_ncbifamImport   72 -ALDFGTA 78  
2_ncbifamImport   75 -AVDFGTA 81  
3_ncbifamImport   71 SAVDFTKA 78
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