Conserved Protein Domain Family
opr_porin_1

?
NF033922: opr_porin_1 
Opr family porin
Proteins hit by this HMM model are members of the Opr family porins, which are mainly found in Pseudomonas and other Gram-negative bacteria with different substrates.
Statistics
?
PSSM-Id: 468247
Aligned: 15 rows
Threshold Bit Score: 449.113
Created: 11-Oct-2024
Updated: 3-Dec-2024
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_130526715  42 YGkhidysgtqPSYDPNKQVGKAGYLNGYGVLGYETASLYGFSAKTEFRGNLDLGEINNDDRKsgi-apFENNALMTEGY 120 Aliarcobacter b...
WP_121627436  41 YG---------IKTDNKGGNKDTGFISGTVGLSYETDSFKGFSAKVGFIGAHVFDDKNDGAEE------VEGKALMNVAN 105 Poseidonibacter...
WP_046998206  42 YGkhvdynsevDNYNQTKLVGKAGYLNGYATVGYETASLYGFSAKAEFRGNLDLGEINNNDRKnsdlapFENNALMSEAY 121 Aliarcobacter b...
WP_128985449  46 YG---------ISQDNK-QSDDSAFSSGAVSLAFETASLYGFSAKAGFIGVHVFDEKNDGDADd-----IASKSLMSEAY 110 Arcobacter cloacae
WP_118885660  46 YG---------EKYDHKGGTEDTGFGNGQATVAFETASFYGLSAKAEFKGNLDLGEVSNGDREtg--apFENNSLMTEAY 114 Arcobacter suis
WP_014769772  43 YG---------QYFNKKGGTKDDGFANGFGEVGFQTAPLYGISVGLKAFGSVKLDDKNDA-YDae--gaIEDNAVLSEAF 110 Sulfurospirillu...
WP_087439409  43 FG---------QSNNAKGATADSGFSNGYLNVGFETAPLYGISLGFSGWGSVKTSEKNDGDYNn----aIADQSVLSQAY 109 Sulfurospirillu...
WP_025345825  43 FG---------VNNDRKGGSVDDGFSNGYLNVGFVTAPYNGVSLGVSGWGSVKTSEKNDDDFKn----aIADRSALSEAY 109 Sulfurospirillu...
WP_012857314  43 FG---------VHNDRKGESKNDSFSNGYLNVGFETAPFHGVSVGVAGWGSVQTSSYHDA-YDe----aMGDRMALSKAY 108 Sulfurospirillu...
WP_007295346  42 YG---------VSSKEKGDVRE-GFISGSASLEYETAPFHRLNFGFGAWGTTRLQQKNDGDYRg----dIESDAIIHQAF 107 delta proteobac...
WP_130526715 121 LKYANDA-FFVSAGRQAIDLEWLSDYHEAVVAGITAVPDTTIVLGWTKRKAESTAE-LSEDFWKIN---ENKGAYVADIK 195 Aliarcobacter b...
WP_121627436 106 IKYETEG-FLIKAGRQNVNLEWMTDYHEAVIAEITSIPNTSILLGYSDKIALADADeLSETFEEVN---GSKGIYVADVI 181 Poseidonibacter...
WP_046998206 122 LKYANDN-FFVVAGRQAIDLEWLGDYHEAVVAGITAVPDTTIVLGWTKRKAESTAE-LSQDFYDLNpvdGNKGAYVVDVK 199 Aliarcobacter b...
WP_128985449 111 INYTTDG-ISATIGRQAIDLEWMGDFHEAAVVAVTAIPDTTIVLGYSQKMAVAGVDeVSETFNKFN---GDKGAYVLDVK 186 Arcobacter cloacae
WP_118885660 115 IKYSMEG-LSISAGRQAVDLEWLGDYHEAVVAAITAIPDTTVVLGYTQRKAESGID-LSEDFHEFN---GNKGAYVIDVK 189 Arcobacter suis
WP_014769772 111 IKYEHEGvGHIVLGRQEVDFNWLTDYIEGVSAELSAIENLVVNMAWARKQSVVGFDeISEKFAKMN---DNDGIYMLEAV 187 Sulfurospirillu...
WP_087439409 110 IKIEHEGmGKVVLGRQAVDFNWLTDYIEGATFEFKGVENLVLNMAWARKYSVVDIDeISEEFSKLN---GNKGIYMLDAK 186 Sulfurospirillu...
WP_025345825 110 IKVEHEGlGALVLGRQAVDFNWLTDYVDGVSAEITAVENLVLSMAWARRQAVIDIDeISESFTKMN---GNDGIYMLEAK 186 Sulfurospirillu...
WP_012857314 109 LKIEQEGmGKVVLGRQDVDFNWLTDYIDGVSAEVTAVDHLVLSMAWAHSNAVIDIDeISERFTKIN---GHDGVYMLDAK 185 Sulfurospirillu...
WP_007295346 108 VRYTGDDwGELQAGRYEIDLEWLNDYILGASAQLTPLAGMDLTLGWAERQAVVDLDeISESFEKMN---GNKGLYFVDLQ 184 delta proteobac...
WP_130526715 196 YTGFTGVELNPYYYSAPDLLDWYGLKTTFSTDYFGLI-----AHYAQTNADSKflidtdddnitdTQMEDGSIAHIELNT 270 Aliarcobacter b...
WP_121627436 182 YQGISDLDLNPYYYTAPDMGDLYGMKVAYYFDDVELS-----AQYAKSKEDTA------------SGYKDGSIAHVNIDT 244 Poseidonibacter...
WP_046998206 200 YAGFEGIELNPYYYNAPDVADWYGLKVTASTDYFGAI-----AHYAQGNTDSK------------VGTDDESIAHVELNT 262 Aliarcobacter b...
WP_128985449 187 YTGLEGLEFNPYAYSAPDLADWYGLKATFTADMFGAV-----AHYAASNEDVA-------------GTEDGSIGHVELNT 248 Arcobacter cloacae
WP_118885660 190 YAGLEGVEFNPYAYSAPDVADWYGLKTIFTADMFGAV-----AHYAISSEDTQ---------------DDGSIGHLELNT 249 Arcobacter suis
WP_014769772 188 YTPIEMLELNPYIYYGDNVFTAYGAKATLNFELSDALktstmLHYAKVNSDATteeddglggtvnVKVEDGSFMQVEQGF 267 Sulfurospirillu...
WP_087439409 187 YTPIEALEFNPYIYYGDNLLSAYGLKTTLTLQPSEELktitmAHYVTINSDVE-------------GTSDGSFAQVEQGV 253 Sulfurospirillu...
WP_025345825 187 YTPIEALELNPYLYYGSDLLSAYGLKATLSLEPSEEVktttmAHYVSVSSDVV-------------DVKDGSFMQLEQGV 253 Sulfurospirillu...
WP_012857314 186 YTPVEILELNPYLYYGNDLLNAYGMKATLSLEPSDAVktttmAHYVTVNSDVA-------------DVEDGSFAQFEQGV 252 Sulfurospirillu...
WP_007295346 185 FMPRQWLTVNPYYYHADDIYRAPGLKLTADYELTEALaatsmAQYVNSRTASA------------SGLDNGDFLWLEQGL 252 delta proteobac...
WP_130526715 271 EIDGFTAAVGYIKTDKDAGaGGMDL---A-GDNISPFEDGNHNYDPDAKTVYGSLGYTISDVTFGALYGQTKYd----tN 342 Aliarcobacter b...
WP_121627436 245 SLMGVNLSAGYVKTDKDGT-GSIISeleL-GDNISPFEDGNYIYDEDARTVYGSASYSIDDIAFGALYGETKY------A 316 Poseidonibacter...
WP_046998206 263 ELDGFTAAIGYIKTDKDAGaTIMTT---G-GDNISPFEDGNEVYSADAKTVYGSLGYTIADVELGALYGQTEYg----vA 334 Aliarcobacter b...
WP_128985449 249 TISDFTAALGYIKTDKDGGaGNMYA---V-GDNISPFEDGNYVYDIDARTVYGSVGYSIAGVDLGALYGQTKY------V 318 Arcobacter cloacae
WP_118885660 250 TLAGVSAAVGYIKTDKDVGaGSMLA---AeGDNISPFEDGTQVYEADARTVYGSLGYTIADLELGALYGQTTYg----tT 322 Arcobacter suis
WP_014769772 268 EFSGVSLALGYMKTDKDGL-AGLES---F-GDQ-SPLEEGNHVFDANAKTPYASISYEIEGVKLGALYAQSKYddg-isS 340 Sulfurospirillu...
WP_087439409 254 DFLGAKLALGYIKVNKNGM-AGLGA---F-GDQ-LPFEEHNHTFDKDAKTPYASAAYEIEGIKLGAIYGKTSYldeisgD 327 Sulfurospirillu...
WP_025345825 254 EVAGFNLGLGYMKTDKDGT-GGIES---F-GDQ-SPFEEGNYVFATDAKTPYVRAEYELEGVKLSALYGQTKYed--agL 325 Sulfurospirillu...
WP_012857314 253 ELFGVALAAGYMRTHDDGM-GGLNE---L-GDQ-SPFEEGNHVFDPEAKTPYMSASYEIEGVTLSALYGQTKYydgdadK 326 Sulfurospirillu...
WP_007295346 253 AYNDFGFYAGYMRADSDGV-GGIDS---F-GDQ-MPFEEGDNIYSEDARTWYLGLDYGWNALSLGALYGETRYd----tP 322 delta proteobac...
WP_130526715 343 RIKENELNLSASYAFSES-LATSLLYVNVDTETSLndePDYDKWIATIEYTF 393 Aliarcobacter butzleri
WP_121627436 317 DEKEKELNLSAEIEIVEDvIELEALFVKVDAQNSD---DDYNKFILEVEYSF 365 Poseidonibacter antarcticus
WP_046998206 335 KDKEKELNLSVGYSFTES-LGASVLYVNVDAEDSD---DNYDKWIAAVEYTF 382 Aliarcobacter butzleri
WP_128985449 319 NDKEKELNLTVGYSFTES-LAASLLYADVDANSST---DDYNKVLASVEYTF 366 Arcobacter cloacae
WP_118885660 323 DDKEKELNLTATYPITES-LAASILYGDVTADSNNtnySDYNKVLASVEYTF 373 Arcobacter suis
WP_014769772 341 SVKEKELDVSVGYEIIKN-LEASLIYVNVDNDTKA---DSYNALKALVKYTF 388 Sulfurospirillum barnesii
WP_087439409 328 KIREKELNLTIGYEIIKN-LEASMIYANIDNDNND---ESYNAIKAHIAYKF 375 Sulfurospirillum diekertiae
WP_025345825 326 KFKEKELDVSVGYEIVKN-LEASLIYVNIDNDDNA---QSYDAFKAHIAYTF 373 Sulfurospirillum multivorans
WP_012857314 327 KFKEKELDVSVSYEIIKN-LEASLIYANIDNDQKD---ESYDAYKAHISYNF 374 Sulfurospirillum deleyianum
WP_007295346 323 RTKEKEFNLIAGYGLWES-VDLELIYADVSKDDAP---DFYTINLAVV-FNF 369 delta proteobacterium MLMS-1
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap