Conserved Protein Domain Family
por_somb

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NF033921: por_somb 
iron uptake porin
Proteins of this family have typical porin structures. It has been reported that Synechococcus outer membrane (Som) porins (SomA and SomB) are involved in iron uptake in cyanobacterium Synechococcus.
Statistics
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PSSM-Id: 411482
Aligned: 16 rows
Threshold Bit Score: 744.561
Created: 19-Oct-2021
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_017290787  59 VTSVSQLSDVRPTDWAFQALQSLVERYGCIAGYPDRTYRGN-------RALTRYEFAAGLNACLDRVNELIAAATAdlVR 131 Leptolyngbya
WP_081857661  72 ITNVSELRDVSPNAWAYEALKSLVERYGCIVGYPDRTFRGD-------RALSRWEFAAGLNACLNTMERLLQENIA--IV 142 Synechocystis s...
WP_073593068  49 VTSVSQLRDVQPTDWAFQALQSLVERYGCIEGYPDRTYRGN-------RAMTRYEFAAGLNSCLDRIQELIAALPQg-VS 120 Phormidium ambi...
WP_132866964  29 VTSVSQLSDVQPTDWAFQALQSLVERYGCIAGYPDGTYRGN-------RALTRYEFAAGLNACLDRVNELIATASAdvVT 101 Scytonema millei
WP_010873344  50 VTSVAELRDVQPSDWAFAALQSLVERYGCLVGYPDRTYRGDaegtlraRPLSRYEFAAGLNACLNTIEQLLQENVS--VA 127 unclassified Sy...
WP_096387880  36 VTSVSQLRDVQPTDWAYQALQTLVERYGCIVGYPNQTYRGN-------QAISRYEFAAGLNACLNQIERLIASSET--VA 106 Stanieria sp. N...
WP_106458238  75 VTSVSELKDVEPTSWAFEALRSLVERYGCIVGYPDRTFRGN-------RALTRWEFAAGLNACLNTMERLIQDGVG--VL 145 Aphanothece heg...
WP_087712113  16 VTSVSQLSDVQPTDWAFQALQSLVERYGCIAGYPDGTFRGN-------NFMTRYEFAAGLNACLDQIVAIVGGGDS--LD 86  Phormidium lacuna
WP_026734876  39 VTSVSQLSDVQPSDWAFGALQSLVERYACIAGYPNGTYRGN-------RTMTRYEFAAGLNACLDRVNELIATKTAdlVT 111 Fischerella sp....
WP_114706807  56 LSSVSQLSDVQPTDWAFQALQSLVERYGCIAGYPNGTYRGN-------RSMTRYEFAAGLNACLERVNELIASATSdlVT 128 Fischerella the...
WP_017290787 132 KEDLATLQQLQEQFAAELATLRGRVDSLEARTTTLEKQQFSTTTKLSGEVIFGIAGVVGEDRALNSDqwrvinaapagaa 211 Leptolyngbya
WP_081857661 143 QGDLDALKRLAQEFQGELAALGARVDNLEMRTAYLEDHQFSTTTKLNGEVILAPANAFGSEMANAAQsp----------- 211 Synechocystis s...
WP_073593068 121 KEDLDRLRRLQEEFAVELTTLRGRVDALEARTTELEANQFSTTTKLNAEVITAIQDTFGNAVGSNSN------------- 187 Phormidium ambi...
WP_132866964 102 KEDLATLQRLQTEFGTELATLRGRVDSLEAQTAELEANQFSTTTKLNVSLITAITDTFGDRIAGNED------------- 168 Scytonema millei
WP_010873344 128 QGDLDLLKKLAQDFQAELKQLAVRVDNLETRTAFLEDHQFSVTTKLYGQTITSLDKVFGDRVGGGSN------------- 194 unclassified Sy...
WP_096387880 107 REDLDAIKRLTQDFQTELATLRGRVDNIEDRTAFLEDYQFSTTTKLLGQVIWSVDDTFGDAIDGDND------------- 173 Stanieria sp. N...
WP_106458238 146 REDIDKLKRLMQEFESELAALGTRIDNLESRVAFLEDHQFSTTTKLNAQVIWSVNDTFGDAVGSDSD------------- 212 Aphanothece heg...
WP_087712113  87 PSDLATIRRLQEEFAAELATLRGRVDGLEARTAELEANQFSTTTKLNGEAIFALSDTFGDAIAAGED------------- 153 Phormidium lacuna
WP_026734876 112 KEDLATFQKLQEEFSAELATLRSRVDALETRTTELEANQFSTTTKLTGEAIFAVAGVFGEEAADEDNnann--------- 182 Fischerella sp....
WP_114706807 129 KEDLATLQRLQEEFSAELATLRDRVDGLEARTAELESNQFSTTTKLNGEAIFAVAGVFGDNAADQDNdsdn--------- 199 Fischerella the...
WP_017290787 212 reaartaafgaagrdvQDNTVLSNRVRLDLNTSLTGKDRLFTRLEASNTTAFnTPVTGTSQTRLGYDttNNPDNSVQLGK 291 Leptolyngbya
WP_081857661 212 ---------------lESQFTLGYRARLNFDTSFTGKDRLRTRLQAGNLPNF-SQVTGTDMSRLSFD--TNTNNSVVVDE 273 Synechocystis s...
WP_073593068 188 ----------------RSQTTFAYRIRLNLETSFTGRDLLRTRLEMGNFGPF-TEVTGTNMTSLNFD--TATESRVFIPH 248 Phormidium ambi...
WP_132866964 169 ----------------DSNTIFGYRSRMNFETSFTGRDLLRTRLEFGNFGDM-EDVSGTNMTRLNFD--TNTDNDVTVPH 229 Scytonema millei
WP_010873344 195 ----------------EFQTQFAYRVRFNLETSFTGKDLFRTRLQFSNFLNG-VEQTGTNMTRFNYD--DNSNNNVEVSH 255 unclassified Sy...
WP_096387880 174 ----------------DTQTRLAYRIRLNLESSFTGRDTLRTRLQVGNFDAI-APLTGTNMVRLNYD--DNSDNQVQIPH 234 Stanieria sp. N...
WP_106458238 213 ----------------QSETQFAYRIRMNFESSFTGKDLLRTRLQMSNFGSI-AEVTGTNMTRLNYD--DNSENQVQVAH 273 Aphanothece heg...
WP_087712113 154 ----------------ITQTQFAYRVRLNFDASFTGRDRLRIRLQDRNLNQL-SGPTGTNMTRLGFA--GTT-DGVEVAR 213 Phormidium lacuna
WP_026734876 183 ------------npalQDNIIFANRVRLNFDTSFTGKDLLRTRLQTKNITEFqGDVTGTRMIRLGFD--GDDDNRVSVDD 248 Fischerella sp....
WP_114706807 200 ------------npdlQDNIIFADRVRLNFDTSFMGKDRLRVRLQARNITEFqGNVTGTRMTRLGFD--GNEDNDVELDD 265 Fischerella the...
WP_017290787 292 LFYRFPLGTNLNVTVDAIGGEFYDNFNTFNP-LFASASTGSVSRFGRFSPIYRASNtgsgsntGAGVSAVLKLSDSLSFS 370 Leptolyngbya
WP_081857661 274 LQYRFPIGNQVTAWVGARALNLDHIFPVLNP-YLESDSTGTLTRFGRRNPLVYRGPe------GAGAGIRYAPNRQFHFA 346 Synechocystis s...
WP_073593068 249 LLYRFPLTSSVTVTVGPTGVGYTDITDTITPsGIADDARGIPSKFGEYSPFFRQG--------GGGIATNINFSKNVILT 320 Phormidium ambi...
WP_132866964 230 LLYRFPVGSNLTFTVGPAGVGYTDITDTLTPpSIADDSRGIPSLFGEYSPLYRRG--------GGGAAVNWEIAESLTLT 301 Scytonema millei
WP_010873344 256 LWYRTPLTDNLTLRLGTVGVGYTDLVDTLTPpTIADDALGIPSRFGEYDPVYRRG--------GGGAGFNWQITPTVQLS 327 unclassified Sy...
WP_096387880 235 LWYFTPLTENLALRGGPVGIGYTDLVDTLTPpGIADDGLGVPSKFGEYNPVYRRG--------GGGAGINWQIIDNVELS 306 Stanieria sp. N...
WP_106458238 274 LFYLTPINDYITLRMGPVGVGYTDITDTITPpTIADDALGIPSRFGEYNPVYRRG--------GGGGAVNLRFVKNLELT 345 Aphanothece heg...
WP_087712113 214 AVYRFPMGDNLRGFLVATGFSAENMSEVLSP--QSSSGSGALSRFGRYNPVFRLSS-------GAGGGVQARFGD-FGLD 283 Phormidium lacuna
WP_026734876 249 LYYYFPIGDRARVTLAAAETEMTDIAETLSP--VSSASSGAISRFGRYNPIYRTND-------GTGFGINYEFSDRASLT 319 Fischerella sp....
WP_114706807 266 LYYYFPLGDKVRVAISAANTELNHLVETLSP--FESSGNGSISRFGRFNPIYRTAG-------STGLVVNYQFSDRASLD 336 Fischerella the...
WP_017290787 371 AGYIA--RRPNDPAESRGLLDGSYGAIAQLAFQPNRDFALGLSYARSYFSGANn-dVSVSGAYGSAFANQPFGN-VATSA 446 Leptolyngbya
WP_081857661 347 ALYLAdgDTANSPDEGRGLFNGSFSTGAQIGFKPFDNWELAATYVHSYQTAER---VNLTGSTGSPISNRPFGR-VPTTA 422 Synechocystis s...
WP_073593068 321 LGYLA--GTPANPIDKNGLFNGKYNAMAQLAFYGNSG-AIGVSYAHAYAPGGL---VDLTGSTGSFLATRPFGDaIATSS 394 Phormidium ambi...
WP_132866964 302 LGYLA--GSPSDPGDGAGLFNGTYHALAQLAVDGDWG-AAGIAYSRSYNPAGV---VDLTGSTGSLLASEPFGDdIATSA 375 Scytonema millei
WP_010873344 328 VGYLA--TNPNDPDPGNGLFNGGYHTLAQLAYQTADG-GIGFTYSRSYFPAGN---TDLMAGTGSLLAIQPFGEvIATAG 401 unclassified Sy...
WP_096387880 307 VGYVA--GDANNPEEGNGLFNGTYHALAQLAWKGENA-AIGFAYSHSYYPQGK---TNLMSDTGSFLAIQPFGEnIATSG 380 Stanieria sp. N...
WP_106458238 346 LGYLA--GEPNNPREGSGLFNGTYHALAQLALYGENG-AVGFAYSRSYFTAGQ---TDLTASTGSKLAIQPFGDdIATSG 419 Aphanothece heg...
WP_087712113 284 VGYLA--GNANNPERKNGLFNGDQGAFANLTYTLGDNVDLGVFYDRHYFPSGE---VNLSGTTGSANARNPFGSdVAVGT 358 Phormidium lacuna
WP_026734876 320 FAYMV--SDAEDPTDKNGLFDGNYSALAQVLFAPIKNLDIGLTYVHSYYAGGSnsgVNLTGSTGSDNARRPFDN-VATSA 396 Fischerella sp....
WP_114706807 337 FAYMV--RDPEDSSGENGLFNGNYGAVAQFIFEPINNLNLGLTYVRSYNAGGSnsgVNLTGSTGSTNAVRPFGN-VSTSA 413 Fischerella the...
WP_017290787 447 NHFGLQATYRFSPK-FTVSAWGLYTQAIAENgkgl-----------atvnTGDRADIWSWAVSLGFPDLGGKGNLAGIIF 514 Leptolyngbya
WP_081857661 423 DRFGLQTTWQITSS-VNVAGWVGYANATAQGgn----------------rQGDNADLWTWNANVSFVDAFTEGGVLSLGG 485 Synechocystis s...
WP_073593068 395 DTFGIQGYYRFTPN-FQIHGWGGYINAQAESsglstisngtggefttlvnRGSDANIWFGAVGMSFPDVWKKGNLPGILV 473 Phormidium ambi...
WP_132866964 376 DIFAFQGFYRFSPK-FQLHGWVGYISASANGsglsaiadgsggtitstveDGDSADLWYGAVGLTFPDVGGEGNLPGILV 454 Scytonema millei
WP_010873344 402 NFYTLQGYYRITPH-VQIHGWGGFVEAQAQGgglsnlsng-vggtvlrdvSWNSSAIWYGLVGISFPDVGGEGNLPGIAL 479 unclassified Sy...
WP_096387880 381 DFYTLQGFYQITPK-LQVHGWGGYVKARAHGsglsnfvdgteiattqfvsDNDSADIWYGAVGLTFPDLGGEGNLGGVVV 459 Stanieria sp. N...
WP_106458238 420 DFFTLQGYYRITPN-IQIHGWGGYISADAHDsglsdlsngrggtvaknvqNGDHADLWYGAVGLSFPDVGGEGFLPGILF 498 Aphanothece heg...
WP_087712113 359 DTLG--GQFRLGLGaIDLSGWLGFTWANAQNngn-------------gfqDGDQAEVINYSLALTAPDLGGDGNLAGLIV 423 Phormidium lacuna
WP_026734876 397 DSFSLETSWRISPQ-FTVSGWLGYSFAHSEVs-------------------DDNADILNYAVTLAFPDLGGKGNLAGIVI 456 Fischerella sp....
WP_114706807 414 DSFGLETSWRISPQ-FTLSGWLAYSLARSEVs-------------------DDSADILNYAVTLAFPDLGGKGNLAGIVF 473 Fischerella the...
WP_017290787 515 GQPPKVTNSDFGPpvlgattarrrDEDTTLHLEGLYRFQLSDKISITPGLIVIFNPENNSNNDTLYVGVIRTTFRF 590 Leptolyngbya
WP_081857661 486 GMPPRARGVDGGPs----------DPGTSYILEAQYRYPLSKNITLTPGFFVVLNPNNNNDNSAIWVATVRTTFKF 551 Synechocystis sp. P...
WP_073593068 474 GLPPRVSNSDVRK-----------ERDTSYHVEAFFRFQVNEYITVTPGFWVIFNPENDSRNDTQYVGVIRTSFNF 538 Phormidium ambiguum
WP_132866964 455 GLPPRVTDSDVRD-----------EDDTSYHVEAFYRFQVNDYISVTPGFWVVFNPENNSDNSNQYVGVIRTSFNF 519 Scytonema millei
WP_010873344 480 GIPPTVTASNLPGa---------vGQTTPYHLEAFYRIQLNDNISITPGFWVVLNPEANSNNATQYVGHIRTSFLF 546 unclassified Synech...
WP_096387880 460 GIPPVVTDSDVQD-----------EPDNAYHIETFYRFQINDYIAITPGFWAVINPENDSDNATQWVGHIRTSFNF 524 Stanieria sp. NIES-...
WP_106458238 499 GIPPTVTHSDVSE-----------DRNTAYHIEAFYRLQLNDNISITPGVWVILNPENNDRNSTQWVGHIRTSFLF 563 Aphanothece hegewaldii
WP_087712113 424 GVPPQATRVQRSDpall----gqeDTDTSLHIEAFYRYRLNDNIAITPGFFVITNPEHNSNNEAQWVGTIRTTFSF 495 Phormidium lacuna
WP_026734876 457 GMPPKVTESSLVA-----------DRDTSLHIEGFYRFKLTDNITITPGLFVITNPEHNDNNDSIFVGTMRTTFKF 521 Fischerella sp. PCC...
WP_114706807 474 GMPPKVIESSLVK-----------DQDTSLHIEGFYRLQVTDNIAITPGLFVITNPEHNDNNDTIFVGTIRTTFKF 538 Fischerella thermalis
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