Conserved Protein Domain Family
msc

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NF033912: msc 
mechanosensitive ion channel
Proteins of this subfamily are mechanosensitive channels, involved in numerous biological functions. Representative proteins of this subfamily are WP_092311603 and WP_068170239 (TCDB accession: 1.A.23.8.3 and 1.A.23.8.5, respectively).
Statistics
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PSSM-Id: 411473
Aligned: 25 rows
Threshold Bit Score: 387.777
Created: 20-Oct-2021
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_084176141  22 VLGAVLILIAAWFIGRAIKWALAKGVDKLPGADRHNe-------GLERRQ--TVGAKLGDVALWTVLLFGVVAALGVLN- 91  Brevundimonas b...
WP_118864562  24 ILAAIAILVLTHFVAKAVQWGIAKLVDRIPALKRHW--------NTSPDH--TIGQQLGTLAYWLVWLVGLLVALQPLG- 92  Sphingomonas gilva
WP_106640024  25 VLGALAILIVAYILARAAKWAIAKMVDRIPALQRHN--------EAEPGK--TLGSLIGDIAFWLILLVGILLALQPLG- 93  Allosphingosini...
WP_135213050  17 IGGAIIILIVAHFAAKAVKWTIAKGVDRLPFFARRDgas---psTAKPMV--DVGERVGEVGYWLVWLLGFMAALTVLR- 90  Alphaproteobact...
WP_066771931  21 ILLALVIVVVAHFAAKAVKWAIAKAVDRIPFFARRDgag---sgGVRPTV--DVGERIGEVGYWLVWLLGLIAALNVLG- 94  Caulobacteracea...
WP_094746413  15 IGLALLILIAAHFAAKAVKWAIAKGVDRIPFLSRRDsag---naGAKPAV--DVGERVGEVGYWVVWLIGLIAALNQLGq 89  alpha proteobac...
WP_052742637  33 VLAAAVILLIGYLLAKAAKWGVAALVNKTPLARQAHrqsgipetGRNPK---SVGAQVGDAAFWIVILIALVLAAQPLG- 108 Sphingomonas sp...
WP_056485937  33 IIAALIILVIGWAIARAVKWGVAKLVNKTPLAIHANe------pNANPRNptTIGAQVGDAAYWVVLLIALFLATQPLG- 105 Sphingomonas sp...
WP_129967329  22 LLGVIIILVITYFIAKAVRWGLVKCMDRLTFLSKG---------SLDHKQ--NLSLSIGTLGYWLVWLIGLLVAVQPLG- 89  Pusillimonas soli
WP_124692435  15 ILIAIVILVATHFIARGVKWAVVRGVGALPVLTRS---------TNRSGE--TLATSLGTLAYWIVWLVGLIVAMQPLG- 82  Pigmentiphaga s...
WP_084176141  92 -----LGGAVAPLNTLLNTVASAIPNIVAAALIFFVGFIVATLARRVVSAALQAASADGWLQKSGVAKT----------- 155 Brevundimonas b...
WP_118864562  93 -----LSQVLDPVRALTTEVFAFLPRILGAGLIFVIGLIVATILRRVVEAALAAANVDGWLARARIGEV----------- 156 Sphingomonas gilva
WP_106640024  94 -----LAQVLEPVRQLTINAFAFVPNVIAAGLIFFIGLVIAKIVKRVVETALLAANVDGWLRRTGLVETagtapaataea 168 Allosphingosini...
WP_135213050  91 -----LEAVVTPLYDMVRGFLNYLPAVVGAALIFFIGFVLATIVRRMVEAAVEAMELDRRLVDAGLTHT----------- 154 Alphaproteobact...
WP_066771931  95 -----LSAVVAPLNGMVSEFLHYLPSIVGAALIFFIGFVLATVVRRMVEATVEAVELDRRLIDAGLTHT----------- 158 Caulobacteracea...
WP_094746413  90 nafpgLRGVTDPLNTMLNGFVSYVPQIVGAALIFFIGFVLATIARRMVEAAAEAAEIDRRLHDAGLTHM----------- 158 alpha proteobac...
WP_052742637 109 -----LAAATSPVGRMLNQFGAAIPNIIGAGLIFFVGYIVASVAKKAVEAVLTAARTEQLAERAGMAKA----------- 172 Sphingomonas sp...
WP_056485937 106 -----LAGATGPLGDMLQGFGTAIPRIIGAALIFFLGYVLAKVAKKAVEAVITASHVERFSTHVGATTP----------- 169 Sphingomonas sp...
WP_129967329  90 -----LTQALDPITALTGEVMTYLPRIVGAAIILFVGILIAKIVRTIVETALGAINVQKWCAKLGQSNSfqddn--aaav 162 Pusillimonas soli
WP_124692435  83 -----LDQAMSPIHVLTNQVFAYAPQLVGAALIFCVGLIFAKIVRNIVEAALGAINFERIGSRLGLCQS----------- 146 Pigmentiphaga s...
WP_084176141 156 T-----GST---GVSDAVGTLVFVLILIPVTIAALEKLAITVITEPAVAVLSTVFDALPRVIAAAIVLAIGLFIGRWVAS 227 Brevundimonas b...
WP_118864562 157 TgtpapGAP---AISKTIGLIVFVSIMLLVATAALEALELESLSGPLVSILDAVAYFLPRLVLAGIVIALAYFVGRWAKS 233 Sphingomonas gilva
WP_106640024 169 PatvaaGRP---SISRSIGLIIFFLIMIPVTIAALDSLGIAAISVPATEMLNAILLAIPNVIGALILIAIGYMVGRLAKS 245 Allosphingosini...
WP_135213050 155 P-----RGP---GLARLLGILTFTLIIIPVAIAALDILDISAISDPATAMLNNILMTIPRVIGAALIIFIAYVIGRWVMT 226 Alphaproteobact...
WP_066771931 159 P-----KGP---GLARLLGLLAFTLIIIPVSIAALQALNITAISDPATAMLNGILMTIPRVIGAALIIFIAYLIGRWVMT 230 Caulobacteracea...
WP_094746413 159 P-----RGP---GLARMIGAVVFALIIIPVSIQALSTLNINAISQPATLMLEGIGAAIPNVIGAMLIIVVAYVIGRWVAA 230 alpha proteobac...
WP_052742637 173 ------DPS---TLPRMVGGIVFALIIIPVAIAALDQLNIRAISEPATAMLRIILDSIPHVVAAAIILALAYVIGRFASQ 243 Sphingomonas sp...
WP_056485937 170 T-----DPT---MLPRTIGGIVFALIIIPVSIAALDTLNIAAISQPATAMLRIILDAIPHVIAAGMILAVAYVIAKFASR 241 Sphingomonas sp...
WP_129967329 163 AqntakGCP---ALARTVGAIVFAVIVIPVAIAALQTLGISSIVEPTVLVLQTVLDAIPRIIAAALLLFIAYFIAQWVRA 239 Pusillimonas soli
WP_124692435 147 AdkpagDGQcadSLVRVCGAVVFTLIIIPVSIAALQTLGISSIADPAVAVLQTVLAAIPRVVAAALLLAIAFVIAQWVRQ 226 Pigmentiphaga s...
WP_084176141 228 LIERILPATGFDRSIQSLIGLSslkptasa-tppasagASPYAGavspayaaqiegaappakpLTPSRVVGMIAMIAIVL 306 Brevundimonas b...
WP_118864562 234 VAEQLLASLGFDHALQGS--------------------GIVPAG-------------------VSGAKIVGTIILTAIML 274 Sphingomonas gilva
WP_106640024 246 AVEQILPSMGFDRAVSAL--------------------GFAPES-------------------TTPSRTAGMVVMIAILL 286 Allosphingosini...
WP_135213050 227 LTEEGLKSIGFDDIINSIANAEpvrvgrermdltpgvdTARFSA-------------------FPPSRMIGLAVLIGIVL 287 Alphaproteobact...
WP_066771931 231 LIEEGLKAIGFDDIISSIANAEpirvgrekmdltpgvdTINFSK-------------------FPPSKMIGLAVLIGIVL 291 Caulobacteracea...
WP_094746413 231 LVENGLRSIGFDDIIRSIARADsvrsaidkmdptpgvdTVDLSA-------------------FPPSRMIGLTVLIAIVL 291 alpha proteobac...
WP_052742637 244 LLSQFLSGTGFDRTISALGVFPsstt---------papGVPSTSagtp-----------atpaLVPSKLLGHAVFVAIII 303 Sphingomonas sp...
WP_056485937 242 LLTQFLATTGFDRTIGSIGIFGnte-----------nrELGATGq-----------------sFVPSKTVGTGAFVAILI 293 Sphingomonas sp...
WP_129967329 240 LLEQLLMTLGLDRALTSI--------------------GRNVSAn------------------VSPSRIAGWLVLVAIML 281 Pusillimonas soli
WP_124692435 227 LVASTLASLGFDRALGSLGAFSp---------------------------------------aTKPSSVAALIALVAIML 267 Pigmentiphaga s...
WP_084176141 307 FTAVEAARLIGFASVAAILAGVLDLAGRVLVGGIIITAGVLIADVLATLINRGTAGADRFASTIVRWATIALATAMGLSF 386 Brevundimonas b...
WP_118864562 275 FAAIAAVEVLEIASLQLMLIQITDLGGRVLFGAIIIGVGVLLARILSGIVA-STSGGDGFAPAIVRYAILALAIAMGLRF 353 Sphingomonas gilva
WP_106640024 287 FSSIKAAELLQSPIIALMLAQVLELGSRILFGTGIILGGVIIARIVSNLV--TNSGTEGWLPAILKWSIISLAVAMGLRF 364 Allosphingosini...
WP_135213050 288 FAAVEAARMLEFGAMAAMLAEVLTLATRVLFGAVIIALGILLANILAAASAKEGKPSSEIISTLVRWGVIALATAVGLRF 367 Alphaproteobact...
WP_066771931 292 FAAVEAARLLAFVAMADMLAQVVQLAGKVLFGAVIIALGILLANILAAASSREGKPSSEIIATLVRWGVISLATAVGLSF 371 Caulobacteracea...
WP_094746413 292 FASVEAANALQFTAMAAMLSQVVSMGTQVLFGAVIIALGVLLANILSAATSKSGTPSSELLSVFVRWGVIVLAVAMGLRF 371 alpha proteobac...
WP_052742637 304 FGLMEAFRQLNFAYGSRMMAEILTLLGSVIFGAVIIAAAIAIAKLVSTVVRASGGANAELTAKIVHIAIIVLGTAIGLRF 383 Sphingomonas sp...
WP_056485937 294 FGLMEAFRQLSFAYGSQIMAEVLTLFGQVVFGAIIIFASVVIARFVAHAIERNGDQGTRVAAPVVRIAIIVLGTAIGLRF 373 Sphingomonas sp...
WP_129967329 282 FAAIEAASLLDFEIVAVMLGQATELGGHVVFGSVIVIVGVVMARLVARLIG-DAVGENGL-PSILKYAIIALAVAMGLRF 359 Pusillimonas soli
WP_124692435 268 FAAVEAASLLAFDAVAVMLTQVTELGGQVVFGSVIILVGVIMGRIVARIVG-DSVGESGL-PSILKYAVIALAVAIGLRF 345 Pigmentiphaga s...
WP_084176141 387 MGIADEIVVLAFGLILGSAAVAAALAFGLGGRETA 421 Brevundimonas bacteroides
WP_118864562 354 MGLANEIVTLAFGLVLGSAAVACALAFGLGGRPTA 388 Sphingomonas gilva
WP_106640024 365 MGLANEIVIIAFASIIGSAAVACALAFGLGGRPTA 399 Allosphingosinicella vermicomposti
WP_135213050 368 MGLANDIIVLAFGLILGSVAVAVAIAFGIGGRDAA 402 Alphaproteobacteria bacterium SYSU XM001
WP_066771931 372 MGLANNIIALAFGLILGSVAVAVAIAFGVGGRDAA 406 Caulobacteraceae bacterium OTSz_A_272
WP_094746413 372 MGLANEIIVLAFGLILGAVAVAVAIAFGIGGRDAA 406 alpha proteobacterium U9-1i
WP_052742637 384 MGLADDIINLAFGLILGAMAVAFALAFGLGGREAA 418 Sphingomonas sp. Ag1
WP_056485937 374 MGLADDIINLAFGLLLGAIAVAFALAFGLGGRDAA 408 Sphingomonas sp. Leaf208
WP_129967329 360 MGLANEIVHLAFGLILGSAAVACAIAFGLGGRETA 394 Pusillimonas soli
WP_124692435 346 MGLANEIVNLAFGLILGAAAVACALAFGLGGRQTA 380 Pigmentiphaga sp. H8
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