Conserved Protein Domain Family
tRNA_MNMC2
?
NF033855: tRNA_MNMC2 
tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD
This HMM describes either the N-terminal region, called MNMC2, of the tRNA modification bifunctional enzyme MnmC, or a free-standing protein that performs the same methyltransferase function, in partnership with an FAD-dependent protein, or C-terminal region, called MNMC1 (see TIGR03197).
Links
?
Statistics
?
PSSM-Id: 411423
Aligned: 112 rows
Threshold Bit Score: 210.787
Created: 20-Oct-2021
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Download Cn3D
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
WP_002973150  21 PVSLLFDDVYFSKQGGWEESQFVFLE-G-NEIQRKWEENenspFRIGELGFGSGLNAFVTLDTWKLSanPTSVEFVSLEG 98  Leptospira terp...
WP_020532249  17 LYNPQLDETYHSSHGAITESRHVFIQ---EGLDFIYSGQe--eINILEVGFGTGLNAILTLEKAETI--KTKINYVTLEL 89  Flexithrix doro...
WP_007094291  15 IHLEDWNEQYHSTHGAIQEAQHVFIKtGlHHLQKMFNPVq---IHILEIGFGTGLNAFITFLEAQKH--QVDINYHGVEA 89  Kordia algicida
WP_018942636  15 IHLPDWDEQYHSKHGAIQEAYHVFIK---SGLDKVLENNtn-eVSILEIGFGTGLNAFITFLEGHKK--NITIDYVGVEA 88  Polaribacter fr...
WP_011708422  15 IHLPEWDEQYHSKHGAVQEARHVFLK---MGLHHFLEINntseLAILEIGFGTGLNAFLTALEAEKL--NLKINYTGVEA 89  Gramella forsetii
WP_010517494  15 IHLEEWNEQYHSKHGAIQEAEHVFLK---HGLHQFEKNAk---IAILEIGFGTGLNALLTIRETLHL--GYTIRYTGIEA 86  Croceivirga rad...
WP_017496118  15 IHLQEWNESYHSKHGAIQEAKHVFIK---NGLSLFDAAP----VSILEIGFGTGLNAFITFLESAQK--QQQIDYVGVEA 85  Flavobacterium ...
WP_009415798  15 LYNPQLNETYHSVHGALQETMHVFIK---NGLYLFPKQP----ISILEIGFGTGLNALVTFAQHTSL--GQTIHYETVEA 85  Capnocytophaga ...
WP_003000569  13 LFNAEIGECYHSKHGALQESKHVFIQmG-LDFYVKHTGLq--kVSVLEIGFGTGLNFLQTAEYVSDS--DIHVDYVGIEG 87  Sphingobacteriu...
WP_008245891  14 LFNETIGEHYHSKHGAVQESKHVFIE-A-GLKHVTLRQSs---INILEVGFGTGLNFLFTLDHCINQ--QLQLNYTGIEA 86  Pedobacter sp. ...

WP_002973150  99 YPLAINILQSLNES---Y----P-----NK-----NLWFEKL-TLSY---ESAIqswkknptdnlwtyqWDHpnnQNPFT 157 Leptospira terp...
WP_020532249  90 YPLEMKLIDELNYKs-yF----Pk----TL-----QEKYEVLhKADW----AKA---------------VEV---TPNFT 133 Flexithrix doro...
WP_007094291  90 YPVASAEITQLNYI---HqlkaE-----ND-----RATFTKMhACDW----ETE---------------TAL---SENFK 134 Kordia algicida
WP_018942636  89 YPVVADEIEKLNYV--------S-----ELksaahQAIFDAMhDTSW----EEK---------------QTI---SEAFQ 133 Polaribacter fr...
WP_011708422  90 YPVPAEEIKLLNYP--------EasqaqEK-----ADLFIKLhKTEW----EKS---------------FSI---SNNFS 134 Gramella forsetii
WP_010517494  87 FPVAQEEIAQLNYV---QllhkP-----EL-----EAVFKKMhSIDW----GVP---------------ENL---IAQFS 131 Croceivirga rad...
WP_017496118  86 YPVDAKEVLEMNYV---AeleaD-----NY-----KDVFEKMhECEW---NQKE---------------VIS----ADFM 130 Flavobacterium ...
WP_009415798  86 YPLTWQEASQMNYPqliD----N-----SL-----SSTFQQMhSCSW----NET---------------IQL---SPTFS 129 Capnocytophaga ...
WP_003000569  88 YPLPLEVIKDTGYNayvD----P-------------LIWHSF-TDNYdksFGSS---------------LPV---IEKMN 131 Sphingobacteriu...
WP_008245891  87 FPLSLEELRSTGYQ---Qy--vP------------DLVWKGL-EDNYalaLNEP---------------ISI---TADQQ 130 Pedobacter sp. ...

WP_002973150 158 LHVFFGDIKNCLPNF--PE-IHAWYLDGFSPGKNPDMWSFESLTLMREKSVPKTSFATFSSAGFVRRNLTELGFVVEKKK 234 Leptospira terp...
WP_020532249 134 LTKLETS----LENYetDQlFDLVYFDAFGPRKQPEMWTADFLAQATKPMKKGGTLVTYCAMGQFRRDLKSLGLAVEKVP 209 Flexithrix doro...
WP_007094291 135 LTKRQQFFDEINDQAk----FNLIYFDAFGARVQPELWTVEIFQKMYEALKKNGVLVTYAAKGSVRRAMQEVGFTVERLP 210 Kordia algicida
WP_018942636 134 LTKRKQFFVDITDKNa----FNLIYFDAFGARNQPELWTEEIFQKMYNALKIDGVLVTYAAKGSVRRAMQTVGFTVERLA 209 Polaribacter fr...
WP_011708422 135 LTKVKKKFHEIADDEl----YNLIYFDAFGARVQPELWTEEIFNLMYRALNKNGVLVTYAAKGSVRRAMIASGFEVQKLP 210 Gramella forsetii
WP_010517494 132 LEKVQINFQEI--TY--QDkFDLVYFDAFGARVQPELWTEEIFQKMFNALRSNGILVTYAAKGSVRRAMQAVGFKVERLP 207 Croceivirga rad...
WP_017496118 131 LTKRKQ-FFDEIDDF--EI-FDLIYFDAFGYRVQPELWSTEIFRKMYQSLKPNGVLVTYAARGVVKRSMIEVGFTVEKLA 206 Flavobacterium ...
WP_009415798 130 FKKRLQHFQQINDTPt----FNLIYFDAFGAQVQPELWNEDIFKKMYNALKNNGILVTYAAKGSVRRALVAAGFTVERLP 205 Capnocytophaga ...
WP_003000569 132 LHIAHTLLMDFTSEKq----FDIVYFDAFAAVHQPEMWSDEALGHIARYIKPGGVFVTYAITGNLKRSMKALGFKIEKAP 207 Sphingobacteriu...
WP_008245891 131 FYIAHTT----LANFtsPPlFDLIYFDAFSVQHQPEMWSDEIIAHVGTFLKPGGVFITYAITGKLKRALKAVGFTIEKLP 206 Pedobacter sp. ...

WP_002973150 235 GFGRKREMISGFLK 248 Leptospira terpstrae
WP_020532249 210 GPPGKREMTRGVKV 223 Flexithrix dorotheae
WP_007094291 211 GPPGKREMLRATKI 224 Kordia algicida
WP_018942636 210 GPPGKREMLRAVKN 223 Polaribacter franzmannii
WP_011708422 211 GPPGKREMLRAVKN 224 Gramella forsetii
WP_010517494 208 GPPGKREMLRAVKP 221 Croceivirga radicis
WP_017496118 207 GPPGKREMFRAFKK 220 Flavobacterium sp. WG21
WP_009415798 206 GPPMKREMLRAQKN 219 Capnocytophaga sp. oral taxon 332
WP_003000569 208 GAPGKREMLRAIKY 221 Sphingobacterium spiritivorum
WP_008245891 207 GAPGKREMLRATKA 220 Pedobacter sp. BAL39
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap