Conserved Protein Domain Family
PspC_subgroup_2

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NF033839: PspC_subgroup_2 
pneumococcal surface protein PspC, LPXTG-anchored form
The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Statistics
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PSSM-Id: 411408
Aligned: 6 rows
Threshold Bit Score: 357.925
Created: 20-Oct-2021
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAF73803   1 MFKSNHERRMRYSIRKFSVGVASVAVASLFMGSVVHATEREGSTQAATSSKMANESQIERRKAaeqaivslsgymtslln 80  Streptococcus pneum...
AAF73791   1 MFKSNYERKMCYSIRKFSIGVASVAVASLVMGSVVHATENEGTTQAPTSSNRGNESQAEQRRE----------------- 63  Streptococcus pneum...
AAF73826   1 MFKSNHERRMRYSIRKFSVGVASVAVASLFMGSVVHATEKEGSTQAATSFNRGNGSQAEQREE----------------- 63  Streptococcus pneum...
AAF73782   1 MFKSNHERRMRYSIRKFSVGVASVAVASLFMGSVVHATEKEGSTQAATSFNRGNGSQAEQRGE----------------- 63  Streptococcus pneum...
AAL90446   1 MFASKNERKVHYSIRKFSIGVASVAVASLFMGSVVHATEKEVTTQVATSSNKANKSQTEHMKAakqvdeyiekmlseiql 80  Streptococcus pneum...
AAF73793   1 MFASKSERKVHYSIRKFSIGVASVAVASLVMGSVVHATENEGSTQAATFSNMANKSQTEQGE------------------ 62  Streptococcus pneum...
AAF73803  81 dgldtsdsrfeellkrakgiveeyrkkidgasdrekieklqqegqtkldelvdkfkkglssseqnghatpkdpsrndgvq 160 Streptococcus pneum...
AAF73791     --------------------------------------------------------------------------------     Streptococcus pneum...
AAF73826     --------------------------------------------------------------------------------     Streptococcus pneum...
AAF73782     --------------------------------------------------------------------------------     Streptococcus pneum...
AAL90446  81 drrkhtqnvglltklgaikteylrglsvskekstael------------------------------------------- 117 Streptococcus pneum...
AAF73793     --------------------------------------------------------------------------------     Streptococcus pneum...
AAF73803 161 gddssvgqgeqpgasnqknpesvpptasgetdsptkpktsndsvnslerelkevketakttlntymltrlkqenpgvfwf 240 Streptococcus pneum...
AAF73791     --------------------------------------------------------------------------------     Streptococcus pneum...
AAF73826     --------------------------------------------------------------------------------     Streptococcus pneum...
AAF73782     --------------------------------------------------------------------------------     Streptococcus pneum...
AAL90446 118 ---------------------------------------------------------------------------pseik 122 Streptococcus pneum...
AAF73793     --------------------------------------------------------------------------------     Streptococcus pneum...
AAF73803 241 adllreskesvekykrmcdeasskenvenlvkeakqeiealvvkhkgrgIDLERTKAKTVIAKYLTGLLDDIKKNLKKEQ 320 Streptococcus pneum...
AAF73791  64 -------------------------------------------------LDLERDKVKKEVREYKEKKVKELYSKSTKSR 94  Streptococcus pneum...
AAF73826  64 -------------------------------------------------LDSERDKARKEVEEYVKKIVGESYAKSTKKR 94  Streptococcus pneum...
AAF73782  64 -------------------------------------------------LDLERDKAMKAVSEYVGKMVRDAYVKSDRKR 94  Streptococcus pneum...
AAL90446 123 ekltaafeqfkkdtlksgkkvaeaqkkakdqkeakqeiealivkhkgreIDLDRKKAKAAVTEHLKKLLNDIEKNLKKEQ 202 Streptococcus pneum...
AAF73793  63 -------------------------------------------------INIERDKAKTAVSEYKEKKVSEIYTKLERDR 93  Streptococcus pneum...
AAF73803 321 HINTVELIKKLGDIKRTYLYKLDESTQK----PTTGTGPESHQTRSFSNLKWLSSSSVRILINQKSA------------- 383 Streptococcus pneum...
AAF73791  95 HKKTVDIVNKLQNINNEYLNKIIQSTSTyeelQKLMMESQSEVDKAVSEFEKDLSSSSSSGSSTEPEasdtakpnkptel 174 Streptococcus pneum...
AAF73826  95 HTNTVALVNELNNIKNEYLNKIVESTSEsq-lQILMMESRSKVDEAVSKFEKDSSSSSSSDSSTKPEtp----------- 162 Streptococcus pneum...
AAF73782  95 HKNTVALVNQLGNIKNRYLNEIVHSTSKsq-lQELMMKSQSEVDEAVSKFEKDSFSSSSSGSSTKPEtp----------- 162 Streptococcus pneum...
AAL90446 203 HTHTVELIKNLKDIEKTYLHKLDESTQKaq-lQKLIAESQSKLDEAFSKFKNGLSSSSNSGSSTKPEtp----------- 270 Streptococcus pneum...
AAF73793  94 HKDTVDLVNKLQEIKNEYLNKIVESTSKie-iQGLITTSRSKLDEAVSKYKKAPSSSSSSGSSTKPEtp----------- 161 Streptococcus pneum...
AAF73803     --------------------------------------------------------------------------------     Streptococcus pneum...
AAF73791 175 ekkvaeaqqkveeaekkakdqkeedhrnyptityktleleiaefdvkvkeaelellkvkakesrdekkikqaeaeveskq 254 Streptococcus pneum...
AAF73826     --------------------------------------------------------------------------------     Streptococcus pneum...
AAF73782     --------------------------------------------------------------------------------     Streptococcus pneum...
AAL90446     --------------------------------------------------------------------------------     Streptococcus pneum...
AAF73793     --------------------------------------------------------------------------------     Streptococcus pneum...
AAF73803     --------------------------------------------------------------------------------     Streptococcus pneum...
AAF73791 255 aeatrlkkiktdrkkaeeeaklkeaveknaatseqgkpkrrvkrgalgeqatpdkkdyfekdfrpafnknqqmvaiqesl 334 Streptococcus pneum...
AAF73826     --------------------------------------------------------------------------------     Streptococcus pneum...
AAF73782     --------------------------------------------------------------------------------     Streptococcus pneum...
AAL90446     --------------------------------------------------------------------------------     Streptococcus pneum...
AAF73793     --------------------------------------------------------------------------------     Streptococcus pneum...
AAF73803     --------------------------------------------------------------------------------     Streptococcus pneum...
AAF73791 335 nklddetktvpdgakltgeagnaynevrdyaikvvsenkkllsqtavtmdelamqltklndamsklkeakaklvpevkpq 414 Streptococcus pneum...
AAF73826 163 -------------------------------------------------------------------------------q 163 Streptococcus pneum...
AAF73782 163 -------------------------------------------------------------------------------q 163 Streptococcus pneum...
AAL90446 271 -------------------------------------------------------------------------------q 271 Streptococcus pneum...
AAF73793 162 -------------------------------------------------------------------------------q 162 Streptococcus pneum...
AAF73803 384 PEKPEHQ---NPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKLAVATYMSKISDDIQKHHLQKEKHRQIVALIKELDEL 460 Streptococcus pneum...
AAF73791 415 PENPEHQ---RPTTPAPDTKPIPQPEGKKPSVPDINQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIVALIKELDEF 491 Streptococcus pneum...
AAF73826 164 PENPEHQ---KPTTPAPDTKPSPQPEGKKPSVPDIYPGIEKAKLAVATYMSKILDDIQ-------KHRQIVALIKELDEL 233 Streptococcus pneum...
AAF73782 164 PENPEHQ---KPTTPSPDTKPSPQPEGKKPSVPDINQEKEKAKLAVVTYMSKILDDIQNIICRKKNIVRLLALIKELDEL 240 Streptococcus pneum...
AAL90446 272 PE-----------TPKPEVKPELE-----TPKPEL----ETPKPEVK--------------------------------- 298 Streptococcus pneum...
AAF73793 163 PETSKPEvkpEPETPKPEVKPEPE-----TPKPEVKPEPETPKPEVK--------------------------------- 204 Streptococcus pneum...
AAF73803 461 KKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQ---------------- 524 Streptococcus pneum...
AAF73791 492 KKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQNTPKEPDNKKPSAPKPGMQPSPQpegkkps--------- 562 Streptococcus pneum...
AAF73826 234 KKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKTGMQPSPQpevkpqpknqnqrlnr 313 Streptococcus pneum...
AAF73782 241 KKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKTGMQPSPQpevkpqpknqnqrlnr 320 Streptococcus pneum...
AAL90446 299 -----PELETPKPEVKPE----------------------PETPKPEVKPELETPKPEVKPEPEtpkpevk--------- 342 Streptococcus pneum...
AAF73793 205 -----PELETPKPEVKPE----------------------PETPKPEVKPEPETPKPEVKPEPEtpkpevk--------- 248 Streptococcus pneum...
AAF73803 525 ----------------------------PEVKPQLEKPKPEVKPQPEKPKPEVKPQLEKPkp---evKPQPEKPKPEVK- 572 Streptococcus pneum...
AAF73791 563 ---------------------vpaqpgtEDKKPSAPKPGMQPSPQPEGKKPSVPAQPGTE-------DKKPSAPKPGMQp 614 Streptococcus pneum...
AAF73826 314 nqknqnqrlnrnlekpkpevkpqpekpkPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPkp---evKPQPEKPKPEVN- 389 Streptococcus pneum...
AAF73782 321 nqknqnqrlnrnlekpkpevkpqpekpkPEVKPQPEKPKPEVKPQPEKPKPEVKPQLEKPkp---evKPQPEKPKPEVN- 396 Streptococcus pneum...
AAL90446 343 ---------------------pepetpkPEVKPELETPKPEVKPEPETPKPEVKPELETPkpeletpKPELETPKPEVK- 400 Streptococcus pneum...
AAF73793 249 ---------------------peletpkPEVKPELETPKPEVKPEPETPKPEVKPELETPkp---evKPEPETPKPEVK- 303 Streptococcus pneum...
AAF73803 573 -PQPEKPKPEVKPQPEKPkpevKPQPEKPKPEVKPQpekpkpevkPQPEKPKPEVkPQPEKPKPEVKPQPEKPKPEVKPQ 651 Streptococcus pneum...
AAF73791 615 sPQPEGKKPSVPAQPGTE----DKKPSAPKPDMQPS---------PQPEGKKPSV-PARQPGTEDKKPSAPKPDMQPSPQ 680 Streptococcus pneum...
AAF73826 390 -PQPEKPKPEVKPQPEKPkpevKPQPEKPKPEVKPQpekpkpevkPQPEKPKPEVkPQPEKPKPEVKPQPEKPKPEVKPQ 468 Streptococcus pneum...
AAF73782 397 -PQPEKPKPEVKPQPEKPkpevKPQPEKPKPEVKPQpekpkpevkPQPEKPKPEVkPQPEKPKPEVKPQPEKPKPEVKPQ 475 Streptococcus pneum...
AAL90446 401 -PELETPKPEVKPEPETPkpevKPELETPKPEVKPEpetpkpevkPELETPKPEL----ETPKPEVKPELETPKPEVKPE 475 Streptococcus pneum...
AAF73793 304 -PELETPKPEVKPEPETPkpevKPELETPKPEVKPEpetpkpevkPEPETPKPEVkPEPETPKPEVKPEPETPKPEVKPE 382 Streptococcus pneum...
AAF73803 652 PEKPKPEVKPQLEKPKPEvkpqLEKPKPEVKPQlekpk----pdnskPQADDKKPSTTnNLSKDKQPSNQASTNEKatnk 727 Streptococcus pneum...
AAF73791 681 PEGKKPSVPAQPGTEDKK----PSAPKPDMQPS--------------PQPEGKKPSVP-EINQEKEKAKLAVATEK---- 737 Streptococcus pneum...
AAF73826 469 PEKPKPEVKPQPEKPKPEvkpqPEKPKPEVKPQpekpk----pdnskPQADDKKPSTTnNLSKDKQPSNQASTNEKatnk 544 Streptococcus pneum...
AAF73782 476 PEKPKPEVKPQPEKPKPEvkpqPEKPKPEVKPQpekpk----pdnskPQADDKKPSTTnNLSKDKQPSNQASTNEKatnk 551 Streptococcus pneum...
AAL90446 476 PETPKPEVKPEPETPKPE----LETPKPEVKPEleipkpevkpdnskPQADDKKPSTPnNLSKDKQSSNQASTNENkkqg 551 Streptococcus pneum...
AAF73793 383 PETPKPEVKPEPETPKPEvkpePETPKPEVKPEpetpkpevkpdnskPQADDKKPSTPnNLSKDKQSSNQASTNENkkqg 462 Streptococcus pneum...
AAF73803 728 -----pkkSLPSTGSISNLALEIAGLLTLAGATILAKKRMK 763 Streptococcus pneumoniae
AAF73791 738 --------KLPSTGVASNLVLEIIGLLGLIGTSFIAMKRRK 770 Streptococcus pneumoniae
AAF73826 545 -----pkkSLPSTGSISNLALEIAGLLTLAGATILAKKRMK 580 Streptococcus pneumoniae
AAF73782 552 -----pkkSLPSTGSISNLALEIAGLLTLAGATILAKKRMK 587 Streptococcus pneumoniae
AAL90446 552 patnkpkkSLPSTGSISNLALEIAGLLTLAGATILAKKRMK 592 Streptococcus pneumoniae
AAF73793 463 patnkpkkSLPSTGSISNLALEIAGLLTLAGATILAKKRMK 503 Streptococcus pneumoniae
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