Conserved Protein Domain Family
glycyl_HPDL_Sma
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NF033716: glycyl_HPDL_Sma 
4-hydroxyphenylacetate decarboxylase small subunit
4-hydroxyphenylacetate decarboxylase, an enzyme with a glycyl radical active site, depends on a radical SAM enzyme for activation, and is found in strict anaerobes such as Clostridium difficile. It has a large and a small subunit.
Links
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Statistics
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PSSM-Id: 411304
Aligned: 10 rows
Threshold Bit Score: 102.095
Created: 20-Oct-2021
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_005035450     3 HFDCKKYINLDCEKGIC-ALCKAvVQIDgegSEACKGFTPAEKCGICVHFv-EPDKYGIGTCRGLGKADWAYASMNACTC 80  Holophaga foe...
WP_016477792     4 YRDCDFYIPIDVVKGID-HAHGD-VVVMgdeEIAAVDFVPAHKCKFCAHY--KETERNMGICSGFTTEYWAFAENGARNC 79  Atopobium sp....
WP_014223609     6 YKNSLNYIPIDVAKGID-RRTGKrVNAD----DVDPNYERMPKCMHCVNFtlNQEKIGLGICR-MGKEFIAYPDMAAVTC 79  Tannerella fo...
WP_019878802     8 HLDCVNFTPIDVAKGFCnAHHAQiMLID---SDTCPMFEAKQKCKFCSNLa-DIDEKGMGTCQGYAKKDWAYAEMAAPFC 83  Succinispira ...
WP_013625683     8 HSDCKNFAPLDVAKGLC-RWSDAiVLID---APLCPEFETLPKCAHCKLYa-D-DGAGLGKCAGYAKPYWIDGNFNASLC 81  Syntrophobotu...
1_ncbifamImport  1 HSDCMNFCAVDATKGIC-RLSKQmINLD---DAACPEIKVMPKCKNCKNFv-EANDEGIGKCVGLEKEDWVYSTLNAITC 75 
WP_009003409     4 HSDCKNFVQFDVFKGFC-RKNGGfVLID---TEICPAFTEKTKCRNCSHFc-DVNEEGIGTCKGLESEYWAYENMDAKTC 78  Clostridium s...
WP_007061354     3 HYDCKNYINLDCEKGLC-ALTKGmVPIDgegSEACPNFKPAEKCGNCKNFc-NPDKYGLGTCTGLEKENWAYATCGASAC 80  Clostridium
WP_005952612    13 HFDCINYINLDCEKGMC-ALDKViVPIDgegSEGCPRFEAAPKCGNCKNFs-DPDKYGIGTCSGYEKENWAYATCGAYSC 90  Blautia hydro...
WP_013251892     5 NYESLYYLPLDCEKGMD-LRTREiIPYDgeaDPET--FKEGFLCKFCKCFc-DPDSHGIGVCKGFDKEEWAYGDCGSFSC 80  Olsenella uli

WP_005035450    81 SGYR 84  Holophaga foetida
WP_016477792    80 EAFE 83  Atopobium sp. oral taxon 199
WP_014223609    80 TGYK 83  Tannerella forsythia
WP_019878802    84 EKFS 87  Succinispira mobilis
WP_013625683    82 RYFE 85  Syntrophobotulus glycolicus
1_ncbifamImport 76 EGHV 79 
WP_009003409    79 EGYE 82  Clostridium sp. D5
WP_007061354    81 PGYK 84  Clostridium
WP_005952612    91 EKYA 94  Blautia hydrogenotrophica
WP_013251892    81 EKFA 84  Olsenella uli
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