Conserved Protein Domain Family
suffix_2_RND
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NF033684: suffix_2_RND 
transporter suffix domain
Members of this protein family contain a highly hydrophobic region about 70 amino acids long that usually occurs as essentially the full length of a small membrane protein, but in some cases occurs as a C-terminal suffix domain for RND efflux transporter permease subunit proteins.
Links
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Statistics
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PSSM-Id: 411281
Aligned: 53 rows
Threshold Bit Score: 43.3312
Created: 24-Apr-2023
Updated: 3-May-2023
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_003041498   6 KYYLGILLFILSFVPYiLVFVIMPFLGLSTSSYLAVSSILLISAEAIFLVSVMLLGRAIIDAIKAAIKKV 75  Francisella tularensis
WP_011516485  17 RFRAGIGVFVLAYAVW-GLVPIAAFAGVSATGIATLTGGIVVVNKIMLLASIAVMGKPGFERLKALLLRR 85  Cupriavidus metallidurans
WP_008162223  17 RFKCGIGLFILAFALW-FLIPIAAAVDAPGSRIAALTGAIFIANKVLLITCIAVMGKEGFQQLKSIVFGH 85  Achromobacter arsenitoxydans
WP_013394944  17 RFKCGIGLFIIAFALW-FLIPVAGYMDVPGSRIAALTGTVFIANKVLLLSCIAVMGKEGFQRLKSIVFGH 85  Achromobacter xylosoxidans
WP_007957055  16 RFKVGVAIICLMLGSW-LMVPIAAALDVPGSKVAALTGVLFISNKVLLLLVIAVMGKAGFAELKRTIGHY 84  Pseudomonas
WP_007938196  16 RFKAGIAILSLTVISW-LAVPLAAAADVPGPKIAALTGILFISNKILLILAIAVMGKSGFQQLKSNVFGY 84  Pseudomonas sp. GM18
WP_020290495  15 RFKAGIAIICVMAGSW-LTVPVMAALDVPGSRIAALTGILFISNKVLLILVIAIMGKSGFQQLKRSVFGY 83  Pseudomonas sp. CFII64
WP_008026406  10 RFKLGIAIICLMLGSW-LLVPIMAATDMPGSKIAALTGVLFISNKVLLIIVIAVMGKAGFQQLKSTVFGY 78  Pseudomonas sp. GM60
WP_019689862  16 RFKVGIVIICLMLGSW-LMVPLAAVADVPGSKIAALTGVLFISNKILLILVIAVMGKSGFQQLKRSLFGY 84  Pseudomonas fluorescens
WP_007900294  16 RFKLGIAIICLMLGSW-LMVPLAAAVDVPGSKIAALTGVLFISNKVLLILVIAIMGKSGFQQLKRSMFGY 84  Pseudomonas sp. GM102
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