Conserved Protein Domain Family
retention_LapA
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NF033682: retention_LapA 
retention module-containing protein
The retention module, as described for the giant adhesin LapA of Pseudomonas fluorescens and for an ice-binding giant adhesin of an Antarctic bacterium, appears at the N-terminus of a number of very large repetitive proteins, many of which have C-terminal regions that make them substrates for type I secretion systems.
Links
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Statistics
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PSSM-Id: 411279
Aligned: 50 rows
Threshold Bit Score: 74.5893
Created: 20-Oct-2021
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_020196658    7 PQEVVVDAVKG--DVYALSLEGKVRAINVGDVLVPGDVIITENGASIEV-IAEGSLYLVDENCVACIPAPsleqqptdav 83   Vibrio owensii
WP_019592499    5 AIVAIVENVIG--TAFARDEAGNVRVLQPGDPIYVGEEVIAESDGLIELaFPDGSGLTLAQGEQATITDDl--------- 73   Thioalkalivib...
WP_017926615    5 TTVATVQTLIG--TAMARDAEGNTRVLQTGDVIQAGETVEVDAGGLVELaFADGSTVTLAEGEAAVITEDl--------- 73   Thioalkalivib...
WP_018937730    4 VVVATVESIVG--TVIARDEDGNTRVLQPGDQIFHGEEVIAEDGAFIEMaFEDGSTMTLAGNESATITPDl--------- 72   Thioalkalivib...
WP_018139369    4 VVVATVESVVG--TVIARDEDGNTRVLQPGDEIFYGEEVIAEDGAFIEMaFEDGSTMSLAGNESATITDDl--------- 72   unclassified ...
WP_018139371    5 TVVATVQALTG--TVIARDVDGNSRVLAVGDAVYAGEEVIPLQGASVDLqAMEGGVLSLGEGQQVLVGEA---------- 72   unclassified ...
WP_019558112    5 AVVATVQALTG--TVIARDAEGNSRVLAVGDPVYAGEEVIPLRGASVELeGMDGVAVSLGEGQQALMGEA---------- 72   Thioalkalivib...
WP_002931930    5 QVVGNVVYVSG--QVLARNADGELRVLKVGDTVLEGEVIITGPGARVELsHADGATTLVPEDSSVLVAADm--------- 73   Thauera sp. 28
WP_013441846    2 AAIGTVVAINGgsNAFAVNERGERRMLKVGDSIQPGEVVTTAQGVVVDIlLTTGQKIEISADQTVKFTPEl--------- 72   Methylovorus ...
WP_006387943    4 SSPAVVNEITG--RAWIRNSDGSLTELHQGSKVPAGSDIVTASGATVALqVENGMPIVIGEGRAVAVTEDma-------- 73   Achromobacter...

WP_020196658   84 vqapvdgqiNVDPTAAADAEFGAEDVAAIQQAILEGADPTAILEATAAGPAgggGGSGSA-NA-GFVTVEYNNPEVLAS- 160  Vibrio owensii
WP_019592499   74 --------aQSAGADPMESQLGEATVEEIIAALERGESLDGLLEAPAAGLD---GG--GE-GGvSFVRIARNVEEISPVg 139  Thioalkalivib...
WP_017926615   74 --------aQTTGADPTESQIGDATVEAIIAALERGESLDDLLEAPAAGLE---GG--GE-GGvSFVRIARNVEEVPSVg 139  Thioalkalivib...
WP_018937730   73 --------aESAEPEPQDAEVADATVEEIIAALDRGEDITDLIEAPAAGAD---GGDGG--GA-SFVRIARVAEEPLAVq 138  Thioalkalivib...
WP_018139369   73 --------aESAEPAPEDAEIADATVEEIIEALERGEDITDMIEAPAAGAA---GGAAGE-GG-GFVRIARGFEEVAPVn 139  unclassified ...
WP_018139371   73 -----------LADSGRADNPEIPTAEEVIAALERGESLDALIAPPAAGLE---GGD-SD-GG-GFVRVARINEPVEPIn 135  unclassified ...
WP_019558112   73 -----------LAESGRADNPEIPTAEEVIAALDRGESLDELIAPPAAGLE---GGE-SE-GG-GFVRVARISEPMEPIn 135  Thioalkalivib...
WP_002931930   74 --------gEAGRADARAAAVEDATIAQVIQAIEAGQDLGEVLEDPAAGLA---GGGAGE-GS-SFVRLLRISEDLEGAg 140  Thauera sp. 28
WP_013441846   73 --------aEFIAPEGTESAVSEATVQAVIQAIEQGRDINEVLEETAAGLI---GAAGNEhGS-TFVNLLRIVEGVTPLs 140  Methylovorus ...
WP_006387943   74 -------gpLADPTEAAVAAPKGTDSDRLLAALQAGQDPFDVLDPTAATLT---GGSGDD-GGgSFVRLARILETTSPLd 142  Achromobacter...

WP_020196658  161 TFFETSAP 168  Vibrio owensii
WP_019592499  140 YEFPSNLF 147  Thioalkalivibrio sp. ALRh
WP_017926615  140 YEFPSNVF 147  Thioalkalivibrio sp. HL-Eb18
WP_018937730  139 YEFPSNSF 146  Thioalkalivibrio sp. AKL3
WP_018139369  140 YAYDANVL 147  unclassified Thioalkalivibrio
WP_018139371  136 YTFPENVF 143  unclassified Thioalkalivibrio
WP_019558112  136 YTFPVNAF 143  Thioalkalivibrio sp. ALE12
WP_002931930  141 PVVDGNAE 148  Thauera sp. 28
WP_013441846  141 YEYPVGTP 148  Methylovorus sp. MP688
WP_006387943  143 LAYPNPGR 150  Achromobacter xylosoxidans
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