Conserved Protein Domain Family
choice_anch_F

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NF033657: choice_anch_F 
choice-of-anchor F family protein
Choice-of-anchor F is a domain found in prokaryotic proteins with a variety of C-terminal sorting and transit domains. These include the autotransporter outer membrane beta-barrel domain, the JDVT-CTERM domain, and variant forms of PEP-CTERM domains.
Statistics
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PSSM-Id: 411264
Aligned: 60 rows
Threshold Bit Score: 207.884
Created: 19-Oct-2021
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
SNB56365      60 ASFGWLDPvnDFgnVGLGIKVYN----EPFTAqe-iyDFAGCLMAQPDRDpg------------dNCTAPPDSGKRFKLK 122 Marinobacter sp...
WP_052042532  77 AAIYWELD--NGsgRAPGLQVVT----DDFDF-----PTNNCIMASGELQseefg-----vvlpkTCSDEEGSSKRYFFE 140 Alcanivorax jad...
WP_088827143 119 AAVYYSLD--DGsgRAPGIQVVT----DDLEF-----PTNNCIMSSGERVdedlg-----tlvpkTCSDPQGSAKRYFLE 182 Marinobacter sp...
WP_100687185  96 AAVYWELD--DGsgRPPGIQVVT----DDLDT-----PTNNCIMSSGMRVdeklg-----tlvpkTCSDPNSSSKRYFLE 159 eubacteria
SFM97697     117 AAVYYELD--DGsgRAPGIQVVT----DDFAF-----PTNNCIMASGEREyfvdgedteptivpkTCSDPASSSKRYFLE 185 Marinobacter pe...
SNB58719     121 AAVYYALD--DGsgRAPGIQVVT----DDFAF-----PTNNCIMASGERVdeelg-----tvvpkTCSDPASSSKRYFLE 184 Marinobacter sp...
WP_083191351  51 GYVFADPA--EGi-LEPGIKAVTsevnADYPNtfnpsGIENCLMANNPDF---------------ACTAEPGSGKRIKTR 112 Yangia sp. CCB-MM3
WP_078530726  43 GYIFADPA--EGv-EPPGLKAVTgevnADFPNtsnpsGITNCLMANTPDF---------------ICTAPSGSGKRVKTR 104 Thioclava sp. L...
WP_098410120  47 GLIFSDPT--EGv-LPPGLKAVTgevnADFPNtdnpkDITNCLMSNTPDF---------------TCTAPPGSGKRVKTQ 108 Thioclava sp. E...
WP_072908692  90 YTLAKDWP--VG--EPAGIKIIN----DDAGVka--pKPSNCIIATSYRAehflds---ddpeqvICSSPFQSHKRYKLA 156 Malonomonas rubra
SNB56365     123 TTe------TNGPIDIVVDV-------------SADDSI------------SLYRVIGKFSNLTdasnsvGGDLNAIRFE 171 Marinobacter sp...
WP_052042532 141 LTe------SDVPVDLVFNLgikdirykgikdpATDGGEelaafrstydigRIYRVIQKIINNT------DERIASFKFE 208 Alcanivorax jad...
WP_088827143 183 IRe------ADTPVDLVFDTgmkdirykgvkdpAEDGGEelaafkeeygigRIYRVIQKVVNNS------DERWLGVKME 250 Marinobacter sp...
WP_100687185 160 IRd------ADTPVDMVFEVgkkdirykgvknpEEDGGEelaafkeeygigRIYRVIQKVVNNS------DERWVGIKME 227 eubacteria
SFM97697     186 IRe------ADTPVDMVFDVgmkdiryggvkdpADDGGEaleafreeygigRIYRAIQKVINNS------DERWVGINVE 253 Marinobacter pe...
SNB58719     185 VRt------ADTPIDMVFDIglkdiryggvkdpVDDGGEalaafreefgigRIYRVIQKVINNT------DERWVGVNVE 252 Marinobacter sp...
WP_083191351 113 LT-------GRSGMDIRLST-------------QTSGGI------------TEYFLYGKTSNLT------GARVTGFEIE 154 Yangia sp. CCB-MM3
WP_078530726 105 LT-------GPTPLEILLST-------------QASNGI------------TEYYTYGKTSNLT------GARILGFEVA 146 Thioclava sp. L...
WP_098410120 109 LT-------GPTPMDIMLST-------------QSSSGV------------TEYYTYGKTSNLT------GARILAFKVQ 150 Thioclava sp. E...
WP_072908692 157 MLpasvdgvGSESIDLVFNV-------------EAEAGS------------REYQVFQKINNWT------DQRLEGFTIE 205 Malonomonas rubra
SNB56365     172 LGFGVGSEFMRSSVG-DGLGF---------------GFDGNDKLSIGPVGKYPGGLFG--GSKVEGL-PFFS-TEVAPFI 231 Marinobacter sp...
WP_052042532 209 IGTGLGDAFQPLNYEdDGVSFemrtmvpreflegetGAPDIRVWNPLRFATFSPKMFDd-GSRDRFEpGFLD-HAAAGFL 286 Alcanivorax jad...
WP_088827143 251 LGYGIGNNFVPFNAAeDGVAFelreavpreffegetGAPDIGVWNPDRYATFSPKAFDd-GSRERFDpGFFD-AQAAGHF 328 Marinobacter sp...
WP_100687185 228 LGHGIGNNFTPFNFAeDGVAFelreavpreffegetGAPDIAVWNPDRFSTFSPKGFDd-GSRERFDpGFFS-DQAAGLF 305 eubacteria
SFM97697     254 IGHGVGAEFERFNFEeDGVAFelrnlvpreffegetGAPDIEVWVPERYATFSPKAFDd-GSRERFDpGFFD-DAAAGLF 331 Marinobacter pe...
SNB58719     253 LGHGVGADFERFNFAeDGVAFelrnfvpreffegetGAPDIEVWQPERYATFSPKLFDd-GSRDRFDpGFFD-DAAGGLF 330 Marinobacter sp...
WP_083191351 155 LGTGSGDNFTPMDSS-DPAy---------------aALFDEDYNPRFN---LPDGLFGsgGQEDAGT-GFFD-DARAQMS 213 Yangia sp. CCB-MM3
WP_078530726 147 LGTGTGDSFTAFDPN-DPSt---------------aALFDADYNPKFN---LPDGLFGdgGQEGAGV-GFFD-SSSAEMT 205 Thioclava sp. L...
WP_098410120 151 LGTGSGDSFTPFDTA-DPAt---------------aALFDQDYNSKFN---LPDGLFGdgGQEEAGI-GFFD-STSAEMT 209 Thioclava sp. E...
WP_072908692 206 VGFGVGADFQSVDPA-NLANLn--------------ISVPSDIWSDGQLANFSAGLFGp-LDKHTGSiGFFDpVQRAGFY 269 Malonomonas rubra
SNB56365     232 esLATAdDGd-----VLETN-----GTIA-TQ--YSS----------------------LF-DDWRTLSETPNGWFIDDD 275 Marinobacter sp...
WP_052042532 287 --PPQIpAAgiekssVIDSGltivdGRIGsITpnYFDvssaqg----------valpgnML-GYMLPDSLLPTVIGEYHT 353 Alcanivorax jad...
WP_088827143 329 --PPQNvGNgsdkttLIFSG-----DDYN-DIgsYGAitdnhfsmadt-qamgaydvqgVF-GYMMADALAPYVIARYDE 398 Marinobacter sp...
WP_100687185 306 --PPQSaGNgsdkavLLYSG-----SEYNsETdaYGAitpnvfsmadtqaagttfvtqgVF-GYMLSDSIAPIVIARYDG 377 eubacteria
SFM97697     332 --PPQDtGGsgdktpYIFSG-----DDLR-EDgaYGAitlnhfsmvda-qaagsdlttgVF-GYLLSDSLAPYSIALYES 401 Marinobacter pe...
SNB58719     331 --PPQDtSGdpekspFIFSG-----TDAN-LNgsFGAitpnhfsmada-qamgstveqgVF-GYVLPDLLAPYVIARYDE 400 Marinobacter sp...
WP_083191351 214 --VAVG-EV------LLSAN-----DLSN-SS--YQV----------------------LFgDAMLDDRMIPDAYFWDAS 254 Yangia sp. CCB-MM3
WP_078530726 206 --ITNS---------LITLD-----ATNL-SNsvLGT----------------------YFgNSLIDDSMLPQAFFWDAT 246 Thioclava sp. L...
WP_098410120 210 --IANT-DN------TLDAT-----DLSN-SV--LAN----------------------YFgNSLIDNSMLPKAFFWDAT 250 Thioclava sp. E...
WP_072908692 270 --IDEYvVGeqpltsTLHAT-----RTLG-SD--YAEvpaga-------------aianQF-GPWLPNTMLPYGIFFDDD 325 Malonomonas rubra
SNB56365     276 GNPA--NDSILLAWNAGTvd--apNWQTYEKVFEnvvvesrdldgdpatpeidinaqdydpnvvpfatvlneggnptvid 351 Marinobacter sp...
WP_052042532 354 NDVGg-ESEKIHAIWDGT------NWRSGRAGID---------------------------------------------- 380 Alcanivorax jad...
WP_088827143 399 GEPDg-ESSALEAWWDGS------DWRYGQAGDDt--------------------------------------------- 426 Marinobacter sp...
WP_100687185 378 GDPDg-ESDAFEAWWDGE------NWRYGQAGGEa--------------------------------------------- 405 eubacteria
SFM97697     402 GDPSg-ESDALEAWWDGN------NWRYGLAGGEd--------------------------------------------- 429 Marinobacter pe...
SNB58719     401 GNPEg-ESDALEAWWDGS------AWRYGLAGDAs--------------------------------------------- 428 Marinobacter sp...
WP_083191351 255 ATTLasDEPVLIAWYNTSs----gTWLYGNLGVEtpteegvv------------------------------------pl 294 Yangia sp. CCB-MM3
WP_078530726 247 GTPVasDEDLLVAWYNVSt----dQWQYGNLGVSgdqylt---------------------------------------- 282 Thioclava sp. L...
WP_098410120 251 GTPVasDEAQLIAWYNLSa----gQWQYGNLGVDsstyld---------------------------------------- 286 Thioclava sp. E...
WP_072908692 326 GNPE--TDAELLAWYGYNpatealGWMGGSQD------------------------------------------------ 355 Malonomonas rubra
SNB56365     352 vsdvlpIVETLGEGDAAgtvddalslveRAADDLydgtfkvlidgeavtvdaFAEWAnnppkvlntsddslyatwrsdeg 431 Marinobacter sp...
WP_052042532 381 ------GDPATTPDNYT-----------IIPDNL------------------LEQWAgqllgle---------lgeapge 416 Alcanivorax jad...
WP_088827143 427 ------GANPFG----------------IIPESQ------------------LEQWAtkllgi-----------dpeqld 455 Marinobacter sp...
WP_100687185 406 -----eGVAPFG----------------VVGNDQ------------------LEEWAerllgt------------tteea 434 eubacteria
SFM97697     430 ------GTPPFGVVVNDqlqqwaekllgLDTDEN------------------PANPE----------------------- 462 Marinobacter pe...
SNB58719     429 ------GLNPFG----------------TVPDTV------------------LEQWAakllgi-----------dpgllg 457 Marinobacter sp...
WP_083191351 295 sdrlsaLADSLGIDAAAlgys---gggdVIPDEV------------------LAAMQ----------------------- 330 Yangia sp. CCB-MM3
WP_078530726 283 -dklqaLADTLGVSVADlgyt---sggdTVPADI------------------VAAMQ----------------------- 317 Thioclava sp. L...
WP_098410120 287 -dklqaMADSLGVTVADlgyt----gggAVPADI------------------VAAMQ----------------------- 320 Thioclava sp. E...
WP_072908692 356 -----------SDGPFA-----------AISDTE------------------IEAMG----------------------- 372 Malonomonas rubra
SNB56365     432 EDGLYeladgsfetletvnatiladeaayervagyVQGPIEDLANVNINPTISVGAAANwptctgdgvstTCSFTFRVS 510 Marinobacter sp....
WP_052042532 417 QIIRF------------------------------DSFLSDDLSGLNTDIFIFIGEKLMdeng----elkLDSITLRVT 461 Alcanivorax jade...
WP_088827143 456 DSVRY------------------------------SSDLADDLATQNMDTFIYISDAILnesg----epkYDNITLRVT 500 Marinobacter sp....
WP_100687185 435 DKKGY------------------------------ASVLADDLATQNMDTFIYIGDGILdeng----apkYENITLRVT 479 eubacteria
SFM97697     463 DNYRY------------------------------ASILADDLATQNMDVFIYIGDGILnedg----slkHENITLRVT 507 Marinobacter pel...
SNB58719     458 DSVRY------------------------------DSILGDDFATQNMDVYIYISEGILddsg----vpkFDNLTLRVT 502 Marinobacter sp....
WP_083191351 331 ANELF------------------------------EVDVIEDLRNMNLNFIIDLGDVDG------------SAVTLRLT 367 Yangia sp. CCB-MM3
WP_078530726 318 ANGLF------------------------------AEDVIEDLRNLNLNYMIDLGDVAG------------NSVTMRLT 354 Thioclava sp. L0...
WP_098410120 321 ANGLY------------------------------TQDVVEDLRNLNLNYIIDLGDVAG------------NNVTMRIA 357 Thioclava sp. ES...
WP_072908692 373 ANLSY------------------------------TMGEIDDLVNVGLNYVVTIGDVTTf---------pGNTFTIRIT 412 Malonomonas rubra
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