Conserved Protein Domain Family
transpos_IS200

?
NF033573: transpos_IS200 
IS200/IS605 family transposase
Most IS200/IS605 family insertion sequences encode both this transposase, TnpA, about 130 amino acids long, and larger accessory protein, TnpB, that may act as a methyltransferase.
Statistics
?
PSSM-Id: 411200
Aligned: 79 rows
Threshold Bit Score: 124.934
Created: 19-Oct-2021
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_011324020   4 TRSN-HTVYNINYHFVWCPKsskskicvprgisdpaqYRHSVLDE-IEQSLEASFKDVCGEYNYEIPSLHISPDHVHLFL 81  Natronomonas ph...
WP_000266197  22 INRSrYSAYLLHVHVVFMTK-----------------YRRPVFGElHHANMRQYVAEVCADFGAELKECDGEADHVHMLI 84  Escherichia
WP_000604943  12 IRRGrHCVFLMHVHLVFVTR-----------------YRRQIFDHdATEKLRTYFSKVCADFEAELVEMDGEPDHVHLLI 74  Escherichia coli
WP_001278583   7 IRLGrHCVFKMHVHLVFVAK-----------------YRRRVFDGdAINRLRTIFAKVCTDFEAQLIEMDGEDDHVHLLV 69  Gammaproteobact...
WP_086557983   7 MRHGrHCVFLMHTHLVFVTK-----------------YRRKAFNKeVIDFLGSVFAKVCKDFESELVEFDGESDHVHLLI 69  Helicobacter py...
WP_020458292   7 YRRGrHVVSSLHAHLVFVTR-----------------YRRGGLDDaMLTRCEQIMRSVCCDFGAALTEFNGEDDHVHLLV 69  Frankia sp. EAN...
WP_011056255   5 LRKGrHSVTDLKIHLVCVTK-----------------YCRPVLSAeGLELIEKSFREVAKKMDFQILEFNGEEDHVHALI 67  Thermosynechoco...
WP_000064873  11 FLRKrHSVSKLVVHLIFTTK-----------------YRRKLFDSqMIAQLREAFGSAAAKLECEIIEMDGEPDHVHLLV 73  Enterobacteriaceae
WP_041205574  11 YLRRrHSVSKLVVHLIFTTK-----------------YRRKLLDGtMIEQMRGAFLSAAEKLEIDILEMDGEADHVHLLV 73  Aeromonas
WP_011432180   5 FVSSgRAVSDLKAHLVLTTK-----------------YRRKVFTSeMLQRLHEVMYDLCQKWGCKLIEFNGEADHVHLLF 67  Synechococcus s...
WP_011324020  82 SAHPKyspSKIARKIKSITAREMWQQHEhL---LEnYlwgGGFWEESYYIGTAGEVSSQTIEQYIER 145 Natronomonas pharaonis
WP_000266197  85 EYPPLvqlTKLVNSLKSVTSRRLRNDFI-DlraA--Ys-kPVLWSRSYFIGSCGGAPLEVVKKYIQN 147 Escherichia
WP_000604943  75 NYPPKlaiSSLVNSLKGVSGRLLRRDRP-DiavRY-Yy-kGVLWSPGYFASSCGGAPISAIRQYIEQ 138 Escherichia coli
WP_001278583  70 EYPPKvavSNLVNSLKGVSSRLLRKERP-DiqkR--Yw-kGVLWSPSYFASSCGGAPISIVRQYIEQ 132 Gammaproteobacteria
WP_086557983  70 NYPPKvsvSKLVNSLKGVSSRLTRQHHF-KsveAS-Lw-gKHLWSPSYFAGSCGGAPLEMIKQYIQE 133 Helicobacter pylori
WP_020458292  70 EYPPKvavSALVNSLKGVSARRLRTEFT-DrvnQH-Li-rGHFWSPSYLAVSAEDAPLALVREYIEE 133 Frankia sp. EAN1pec
WP_011056255  68 EYPPKlslSQIVNALKGVSSR--RYGKA-AlpkPh----eESLWSPSYFAASVGGAPLEVLKEYMRN 127 Thermosynechococcus elongatus
WP_000064873  74 AYPPKlavSVMVNNLKSVSSRLLRQQNA-HlrmQ--Sk-tGLLWSRSYFVCSTGEATIETLRAYVQS 136 Enterobacteriaceae
WP_041205574  74 AYPPKlavSVLVNNLKSISSRQIRILNT-HlrkQ--Sn-sGLLWSRSYFACSAGGATIETLKAYVAS 136 Aeromonas
WP_011432180  68 QYYPQvdlSKLVNNIKSVSSRRMRSEFA-DyisKI-Yr-kNVLWNESYFIASCGGVTVSALSQYIES 131 Synechococcus sp. JA-2-3B'a(...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap