Conserved Protein Domain Family
lasso_PadeA_fam

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NF033524: lasso_PadeA_fam 
paeninodin family lasso peptide
Members of this family are lasso peptides in the paeninodin family, mostly from the genera Bacillus, Paenibacillus, and Thermobacillus. The HMM covers the leader peptide region but only about half of the core peptide region, since it is quite diverse.
Statistics
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PSSM-Id: 411161
Aligned: 82 rows
Threshold Bit Score: 35.8955
Created: 24-Apr-2023
Updated: 3-May-2023
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
SFL15867           4 RKEWKKPALEMLDVQMTEAsttdGPETdEaYIAGIR 39 
EHS58771           3 KKEWQEPTIEVLDINQTMA----GKGW-K-QIDWVS 32 
ETT51301           5 KKEWQAPALEILEVNQTMA----GTGY-K-HIDWVT 34 
SCY71544           5 KKEWQAPVLEVLDVNETMA----GVGY-R-QIDWIT 34 
SEL65267           5 KKEWQAPALEVLEVNQTMA----GIGY-R-EIDWVT 34 
SLK14141           5 KKEWQAPALEVLEVNQTMA----GIGY-R-QIDWIT 34 
IITBIO:IJ21_43380  3 KQEWQAPVLETLDVKETMY----GKGV-T-EVDSVT 32 
SFB25366           3 KQQWQTPELETLNVSETMY----GKGM-T-NIDFVT 32 
SFS54747           4 KKEWQVPTVEMLDVSETMY----GKGM-T-NIDFVT 33 
SFI28398           3 KKEWTIPTLESLEVSETMY----GKGN-T-TIDYVT 32 
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