Conserved Protein Domain Family
lasso_benenodin

?
NF033522: lasso_benenodin 
benenodin family lasso peptide
This family consists of both the leader (removed) and core (mature) portions of precursor peptides from the benenodin family of lasso peptides.
Statistics
?
PSSM-Id: 411159
Aligned: 27 rows
Threshold Bit Score: 34.1542
Created: 19-Oct-2021
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_013041639  1 MDRHDNSeVDEIIDLGTASAVTQGmGSGSTDQNGQPKNl-iGGISDD 46  Sphingobium indicum
WP_016903880  6 NDAHTTTfGQDLIVLGIASLDTQG-GPLAGEEMGGSTT---LGISQD 48  Xanthomonas
WP_006452332  4 NDTTHSDaSNEITVLGVASTDTKG-GPLAGEEIGGFNV---PGISEE 46  Xanthomonas hortorum
WP_017502691  1 MSQFEL--DPDVVDLGDVIELTRG-NALDGGDDNAGVLrkpIGLSPD 44  alpha proteobacterium LLX12A
WP_009858733  1 MDEET---ELDIVDLGDAKDTTKG-ILLPGSEDNVTMP----GRQIA 39  Rubrivivax benzoatilyticus
WP_009823907  5 MNNINEH-EDSVVDLGVASVETKGaALDDSDNIGGQVRq--LGIADD 48  Sphingomonas sp. SKA58
WP_017500748  6 MSNIEH--DEDIVDLGAASVETQGaIRGVLDLTGGQLNq--MGIADD 48  alpha proteobacterium LLX12A
WP_004209709  1 MERDAH--SQDIVDLGDAVELTRG-VLLIGQDDGNGTLykaSGISDE 44  Sphingobium
ESQ92588      1 MEKIET--HEDLIDLGAASSETKGvGFGRPDSILTQEQakpMGLDRD 45  Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896
GAY20123      1 MERTEV--TEEVIDLGQASAETKGgGELILDSVSSEQNf--AGLSDD 43  Sphingobium fuliginis
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap