Conserved Protein Domain Family
twin_helix

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NF033233: twin_helix 
twin transmembrane helix small protein
Members of the seed alignment for this family are small (average length 68 residues), strictly bacterial, and extremely hydrophobic. Pfam model PF04588 (HIG_1_N) includes both eukaryotic proteins, including a protein from the fish Gillichthys mirabilis, and the members of this family. Similarity between those eukaryotic proteins and the members o this model may represent convergent evolution related to the similar composition of their transmembrane alpha-helical regions, rather than a common origin or common function.
Statistics
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PSSM-Id: 380228
Aligned: 135 rows
Threshold Bit Score: 26.2307
Created: 24-Apr-2023
Updated: 3-May-2023
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_007687646  6 VIALILAMGATLFALIRGIVAFLQmtkeqlnsPeGG-PSpsslKQNRMMMNRILFQAVAVIIVALLLLMKGN 76  Sphingobium indicum
WP_018718692  6 KAGIVITMLAIVASLGSGLFFLIR--------D-GSrTR----RTLNALTVRITLSVLLFALILLALFTGVL 64  Arhodomonas aquaeolei
WP_014850991  3 KAVIVVLLVATLISLFSGLFFLVH--------DaGR-TS----RVVMALFVRVLLSALIVALIGWGFYSGQL 61  Stutzerimonas stutzeri
WP_008569173  3 KTAIVLSLVATLVSLFSGLFFLVR--------DeGR-RS----RVVAALFVRVCLAALTVALIAWGFWSGEL 61  Stutzerimonas stutzeri g...
WP_003284436  3 KAAIVLLLVATLVSLFSGMFFLVK--------DeGR-TS----RVATALFIRVTLSALTVALIGWGFYTGQL 61  Stutzerimonas stutzeri
WP_009401756  3 KAAIVVMLLATVASLFSGLVFLVK--------DdEN-ST----RLLKALTVRVCLAAVTLGLITWGFVSGQL 61  Pseudomonas
WP_012698793  4 KVAIVLSLLAMLASLFSGLFFLVR--------DaGR-TH----RVLHALYVRVGLAALILALVAWGLYSGQL 62  Azotobacter vinelandii
WP_009614697  3 KAAIVVLLLATVASLFSGLFFLVK--------DeGH-GS----RVVNALTVRVILAALTLALVAWGFYSGQL 61  Pseudomonas
WP_010447483  3 KAAIVLMLIATLVSLFSGLVFLVR--------DeGP-SH----RLLTALTIRVSLAAITLALITWGFYSGQL 61  Pseudomonas
WP_010566699  3 KAAIALMLIATVASLFSGLFFLVK--------DeGH-SN----RLVTALTVRVVLAVITVALIAWGFFSGQL 61  Pseudomonas extremaustralis
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