Conserved Protein Domain Family
choice_anch_E

?
NF033208: choice_anch_E 
choice-of-anchor E domain-containing protein
This HMM describes a domain just over 100 amino acids long and usually found in tandem copies. Members appear to be extracellular proteins that have some C-terminal anchoring domain, usually PEP-CTERM but occasionally a type IX secrection (T9SS) recognition domain.
Statistics
?
PSSM-Id: 411102
Aligned: 62 rows
Threshold Bit Score: 50.0653
Created: 20-Oct-2021
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_022686496       16 ANGASaATIIQFDseqGASRGFDGFDSSRGTLNKVTLQVAINKSRVWLLSVPSNSPTtSSVd--WAIDGVWRFgSNNAal 93  Sphingomon...
WP_045818360       21 TGWNT--GFRQVSgghNNFTNLAGFDSSLGTLTGVSVSYSAEVNLSGGFLVRDPTd--------CAVFCEDDV-SGSGsv 89  Cellvibrio...
WP_058753998       16 ANAASaATIIQTDseqAGSRGFRGFDSALGTLNKVSLDISLSKSRVWAINVPAANAGiKTVr--WTVDGNWRL-GSSIas 92  Sphingomon...
OJW03076           39 AFDTT-ISFTDGNh--SSVIKFPKFDPQTGMVTCAKLTMTISSVLNFMYFENRDNAP-NTAg--VKFTREDII-SGPGl- 110 Sphingobac...
WP_014780276       31 PWQEInWSTPTLNt--QIALLYDGFDASLGTLTSVHFQFTLVETLNNIAFVIPGFGN-QIVgnpTPLTATATI-FASGag 106 Thiocystis...
EXI81277           30 TPTQH-QAFSLPDldeTFELFFDGFDSSLGKLMSVHWTFEGTATLNNAVFNIGTAP--ATIgdpNPLSAIWNI-TFSSpv 105 Candidatus...
WP_075258739       33 NWQSAaFNLASIDd--DTTLSFHGFNSGLGSLIGVVMKFTLSETLYDRVFNLGSKA--SNIgnpSQIFATSII-TVSGpl 107 Herbaspiri...
bbmufp:Hsero_2759   7 AWQQAaFDLPTIDa--SATVQFNGFNASLGKLIGVTVKFIMDETLTDTIYNF-NTHA-VTVgnpRPVFATSTI-TATGpl 81  Herbaspiri...
WP_012361906       30 LTQTQrFINTENNv-gEDL--FEQFDQTLGILQDVRLTYNFDYTAIYNCPNQTG----CSIn--YSRGLDFYF-PNSDsi 99  Crocosphae...
WP_070268655        6 SYDITsVAAGTKTn-iLTLLNIKQFDALLGTLTGIEIDYGSHLLGQVAVTNESLKKD-KTAv--FSLSSTMSL-TGPA-- 78  Duganella ...
WP_022686496       94 GNPLVALTG--AGTSvvALNQLSdGrafgYfaVTAKGSA-TLNFDPMqfvgrysrfngfdlGflPN-LDR--TgdGqPDP 167 Sphingomon...
WP_045818360       90 SSSYIFDLY--SPEVigYDAGINlGfglsC--SDDDGYC--DSFNNQnrndwn--gelfssTqlSI-IANf-I--DtSVT 157 Cellvibrio...
WP_058753998       93 LDGLLVRLAg-SGSDtvDMTRIQdG-------RALGFFD-VIATGGAslsldp--tlfvdtA--TS-FNGfdL--GhNGD 156 Sphingomon...
OJW03076          111 NSPLSNDETktFGPY--NLAPKD-GvmnsG--PDYIGVG-PEDIFNTtksv------titdL--SD-LSQf-YgpP-GDS 173 Sphingobac...
WP_014780276      107 GLLTSTNVLttPGFIgtVLDNSS---------INIVGTA-SVNTTiatd--------lyshS--AD-LSGy-Ig-G-PKT 162 Thiocystis...
EXI81277          106 GLSDSELLV--TPGFsgLVPAGG---------PTQVGTT-GLVgisgma---------widnsdPVtLADy-I--GaAAS 161 Candidatus...
WP_075258739      108 GLQSVNQLS---------TTPFR-G-------KVPSGLS-TIATASLtnhqva--pvqlngT--PAsLASy-I--GaNHQ 162 Herbaspiri...
bbmufp:Hsero_2759  82 GLSTVNQLTttPQFAgvVPAAPS---------LGSFGSK-SISNTVTgiqsgp--vtvngtP--AS-LAAy-Ig-G-QNS 143 Herbaspiri...
WP_012361906      100 GDGEVTDRR--SNSI---------G----P--VTVAGNGiDSVFINInnigre--islldfD--LP-LSIf-I--G-TGR 153 Crocosphae...
WP_070268655       79 GLNLGSDSKs---lFsaSVTAVK-N----T--ANVIGKT-Gtadlss--------stllsgN--TN-FSLf-T--G-TGD 132 Duganella ...
WP_022686496      168 S-DTTITGLPAGGdtfqLDGGACFVNNGNpvaqaeDLCGSA-NYTLTYDY 215 Sphingomonas phyllosphaerae
WP_045818360      158 MrTYNNLYVRSEN----CPDTEDECYTNA------SSTFSG-NVSVSYTY 196 Cellvibrionaceae bacterium 1162T.S.0a.05
WP_058753998      157 VgDTSFSLLPSSSqlrqLSGSCFVTTSGSpsspagEDFCGSaSYKLTFDY 206 Sphingomonas endophytica
OJW03076          174 L-AYNYTASGS-S----QISNTGNWFGGI------DAAGSI-HYRIEFCY 210 Sphingobacteriales bacterium 44-61
WP_014780276      163 V-TITLNSSGT-Q----SGSVTNWVLAGN------TGSASG-TASIRYDY 199 Thiocystis violascens
EXI81277          162 V-LMTVSGEGTQG-----GSVPQTVFSGN------NGTAEG-IVSLYYDY 198 Candidatus Accumulibacter sp. BA-92
WP_075258739      163 V-TISVDGLGVQS-----GSLARNVLTGY------DGTASG-VVYLRYIY 199 Herbaspirillum sp. WT00C
bbmufp:Hsero_2759 144 V-TINVDGEGS-Q----SGSLPPNVMNGY------SASANG-MVYLQYIY 180 Herbaspirillum seropedicae SmR1
WP_012361906      154 V-GEVIGSSTF------SIGNGGSIINQV------FLN----DLTLSYDY 186 Crocosphaera subtropica
WP_070268655      133 V-GAWLNISAL-S----DVSGQ-TITNTF------TTWANG-QGKVTYTY 168 Duganella sp. HH101
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap