Conserved Protein Domain Family
ND1

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MTH00225: ND1 
NADH dehydrogenase subunit 1; Provisional
Statistics
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PSSM-Id: 214465
Aligned: 10 rows
Threshold Bit Score: 371.675
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
242610065   1 MFSFFGVVVQMLGLLLAVAFYTLLERKVLGYIQLRKGPNKVSLVGVPQPLSDAAKLFLKEQTKPILSNWLAFLVAPVLSL 80 
228015400   1 MSLTLTIVISYIMIALAMAFYTLVERKLLGYFQLRKGPNKVSLMGLPQPFADALKLFSKELTFPTLANTTPFLMAPLLSL 80 
219524280   3 VSFSLTLLITVLMAAVAMAFYTLLERKILGYAQTRKGPNKVGLMGLPQPFADALKLFTKELSIPQMANKTPFLVAPSMSL 82 
219524191   5 TSIMLKTLLTLLLVTLGVGFYTLMERKVLAYIQLRKGPNKVGLSGLPQPLADAMKLFTKESINISNSNKPVYFIAPIMAI 84 
164420835   4 ISTLIKSLTLFLCLALSVGFYTLVERKVLSYAQLRKGPNKAGFLGIPQPLADAMKLFTKETTKIQKSMFILYNISPVLAT 83 
240266399   1 MFCFISFLVADVFLLICVAFYTLLERKVLGYIQLRKGPNKVGIMGLPQPLADALKLFLKEQAKPVLVNQWPYIFAPIMSL 80 
218456828   2 VLFLLIYLLMIICALICVSFVTLLERKVLGYIQIRKGPNKLGLIGLLQPFSDGIKLFFKEQSFPYKSNYLIFYLSPIFLL 81 
260150956   2 VLFILIYLVMLICILICVSFVTLLERKVLGYIQLRKGPNKLGYMGILQPFSDGIKLFFKEQTYPYKSNYLIYYLSPIFLL 81 
190349584   1 -MNILYMMIMLICVLISVAFLTLLERKILGYIQIRKGPNKVGYNGILQPFSDALKLFLKELISPTQANRISYYMSPTLSM 79 
299827801   1 MMKMLFFLMLFICVLLSVAFLTLLERKILGYMQIRKGPNKVGVMGILQPFSDALKLFTKEMTTPVLANRFSYYFAPLLNI 80 
242610065  81 ILSLCMWLVYPsFGFSVYSFSFGILFFLCISGINVYGTLVAGWSSNSKYALLGSLRAVAQTISYEVSMILILLSGVYLVG 160
228015400  81 ILALSLWHMYP-HFFPSFFISFGFLFFLMISSLNVYSVLAAGWASNSKYALLGAIRGIAQTISYEVSMILILLSPIICKM 159
219524280  83 FLALVLWPLYPsPMPTFYSHPCEHYSSLMISSLNVYTTLGAGWSSNSKYALLGALRGVAQTISYEVSMVLILLAPLVMLT 162
219524191  85 MIMYMTWNIYT-SIFSISMFKLGILFFLAISSLNVFAILLSGWASNSKYSLIGAIRAIAQTISYEISMALILMSVLMLAL 163
164420835  84 SIMFITWMLYNtPANQNTIIKLSIMLFIVISSLNVYTIMLSGWASNSKYALLGAIRAVAQTISYEISMALLIMSILLISL 163
240266399  81 ILSLGIWSIYPsSSVHVY-FPFGVLFFLCLSSLSVYGTLIAGWSSNSKYALLGSLRAVAQTISYEVSMVLVLLSGIFIVG 159
218456828  82 TLSFLLWVLYP-YLMNLYNFNYGILFFMVCTGMGVYGIMLSGWSSNSNYALLGSIRSVAQVISYEVSLIMIMLCIVMFVF 160
260150956  82 FLSFCLWLLFP-FILNIYNFNYGILFFMVCTGMGVYGIMLSGWASNSNYALLGSLRSVAQVISYEVSMMMIMLCMVVFVF 160
190349584  80 VVALILWSLFP-SLLYCFDFHFGLIFFMCCISISVYTLLAAGWSSNSKYALIGCLRAVAQTISYEVSLAILLLSLVFMSE 158
299827801  81 FISILLWVSIP-YMFYSIDFEFSIIFFLCCISLSVYTVMGAGWSSNSKYALLGALRAVAQTISYEVSLALIMFSVIFLSE 159
242610065 161 SYSSFSFFVFqsASCWVFFSCSLISFVWFITTLAETNRAPFDFAEGESEIVSGFNVEYSAGGFALIFMAEYGSILVMSVL 240
228015400 160 TMNMNEMVSN--EMPPLFLLLFPLMIIWFVSALAETNRAPFDFAEGESELVSGFNTEYSGGTFAFIFMAEYMNILFMSLL 237
219524280 163 TTSLTDMSTN--RLFAPMLVFFPLALMWFATILAETNRTPFDFAEGESELVSGFNTEYSSGTFALIFMAEYLNILFMSLI 240
219524191 164 TFNLKEMKST--QIMWFSMVMLPLMVMWMISCLAETNRAPFDLAEGESELVSGFNIEYGGGKFALLFIAEYGSILFMSML 241
164420835 164 NFNMEKTSISqmPTLWMMFILPLIFSAWMITMLAETNRSPFDLAEGESELVSGFNIEYGSGEFALLFIAEYGSILFVTVL 243
240266399 160 SFNFFDFVTFq-KYFWVFFISYSVSLVWVVTTIAETNRAPFDFAEGESELVSGFNVEYSGGGFALIFMAEYASILIMSLI 238
218456828 161 SYNLMDFMYYq-KYIWFMFLSFPLFFCWLSSCLAETNRSPFDFAEGESELVSGFNVEYSSGGFAFIFLSEYMNIIFMSML 239
260150956 161 SYNLLDFMYYq-SMCWFLFMCYPLFFCWLSSCLAETNRSPFDFAEGESELVSGFNVEYSSGGFAFIFLSEYMNIIFMSML 239
190349584 159 TYNLYNYSYEq-LYIWYFFMYIVLFYCWMSSMLAETNRAPFDFAEGESELVSGFNIEYSSGGFTLIFLAEYSNIIFMSMI 237
299827801 160 TYNLFYLCYEq-NIMWYMIVFMPLFMCWLGSMLAETNRAPFDFAEGESELVSGFNIEYSSGSFAVIFMAEYSSILFMSMI 238
242610065 241 TGIFFFGsdnfffLSFFGFFLLKGMFFAFCFLWVRGSLPRIRYDKLMSLTWKSFLPLSLGWLSFVLIFSF 310
228015400 238 TSIFFFP------VKIPIFLCVFTLLFAYGFIWVRGTLPRMRYDQLMSLTWKSFLPFSLSSLLLLTPILM 301
219524280 241 TTFFFFPvglgpaVALPAITMLKGLCLAFLFVWVRATLPRMRYDRLMALTWKSFLPAALAILFPVTAITS 310
219524191 242 TACLFMGgl---sETTGILNLLKLMLITFVFLWVRGSYPRMRYDMLMSLTWKTFLSTSLAFVFIMMIQW- 307
164420835 244 TATLMLKgs---fNTINLTQMVKIMTLAFTFLWVRATFPRMRYDALMSLTWKTFLTLTICSVTMLITHNN 310
240266399 239 SSILFFGgssvvlFCSDFFLIIKTFIISFFFLWVRGSLPRLRYDLLMDLTWKSYLPFSLGFLFFVMSLMM 308
218456828 240 SVIMFMGc-----DLMSIMFYFKIILIVFWFIWVRGVLPRFRYDKLMYLTWKLFNGLSLNYFFMHLGLLL 304
260150956 240 TVILFLGc-----DILSLMFYLSVIMIVFWFIWVRGVLPRFRYDKLMYLTWKLFLPFSLNLFIFYLSILI 304
190349584 238 SSILFLGslm-fmWESDFFLIIKMMILTFWFIWVRGVMPRHRYDKLMYLAWKSFLPVSLAYLIMTLLLKI 306
299827801 239 SVVLFMGslc-iyLMNDLFLIIKLTLLTFWFIWIRGVMPRYRYDKLMYLAWKSFLPLSLSYLIIILAFKL 307
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