Conserved Protein Domain Family
ND1

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MTH00218: ND1 
NADH dehydrogenase subunit 1; Provisional
Statistics
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PSSM-Id: 214463
Aligned: 45 rows
Threshold Bit Score: 262.539
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
16117411    5 TMLYI--INPLAYIIPILLATAFLTLVERKILGYMQFRKGPNVVgGPYGLLQPIADGLKLFIKEPIRPSASSPFLFLAAP 82 
157384904   1 MVLGI--LLLLLFVVCLLLLVAMLVLLERKVLGLTQLRKGPNIV-GLYGVLQTVVDGVKLLTKEMVLLGGDRFFFFYVSP 77 
157384926   2 VLIGV----GVLFVVSLLLLVALLVLLERKVLGLAQLRKGPNIV-GIYGILQTVVDGVKLLTKEMVLVTNDRFVFFYVSP 76 
57642245   12 LLVQSktIWLLLVALGLLLMVAFLVLIERNILGLVQERKGPNVV-GVYGVVQTVMDGGKLLLKQMVLADGAHLVFFIMSP 90 
7335701     1 -----myLFSLVFVLFLLLLVAFLVLLERKIFGLTQVRLGPNVV-GASGLVQTIGDGVKLLLKRFFLFSKLN-FFFRVCP 73 
242543531   1 ---MF--FFFLFLSLSLLLLVAFLVLMERNILGLLQIRKGPNIV-GFFGIIQTVMDGIKLLLKQYIFKNTYGFFFFLFSP 74 
28436206    1 MILVI--VFYFIFILFLLLMVALLVLLERKVLGLAQIRKGPNIV-GIYGLMQTILDGGKLILKKLMVLFNIRKFFFLLSP 77 
48860550    1 MMLLI--LIYLFFILILLLMVAFLVLLERKVLGLVQIRKGPNIV-GIYGIVQTVVDGVKLILKNLMVLVNVRKFFFLLAP 77 
284177721   2 FLFAD--VCLVLYLLMVLLLVAFLVLLERKVLGVLQIRKGPNIV-GVNGLMQTVMDGVKLLMKKYFMGVFN--VFFLVAP 76 
270267725   1 MLLNL--FFSLMFILFLLLLVAFLVLFERNILGLDQSRKGPNIS-GYFGILQTILDGVKLLMKEYFINPSMRILFFILSP 77 
16117411   83 TIALTLALLMWVPLPLPHSIININLGLLFILAISSLTVYTILGSGWASNSKYALMGALRAVAQTISYEVSLGLILLSMII 162
157384904  78 FLLFCLATWGWFFMPGLGGGDGGGISVIVVLYISSVGVYGVLWAGWGSSSVYSLMGGVRAVAQMISYEVVMGLFIILLAY 157
157384926  77 FLLFSLATMGWFFMPGMGGGEGGGMTILVILYISSMGVYGVLWAGWGSGSVYSLMGGVRAVAQMISYEIVMALFILLLVY 156
57642245   91 IVCFILSLFSWAFVPVPFLLVSSKYSILVTLFISSILVYPVLWAGWSSGSMYSLLGGVRAVAQMVSYEVVMGIFIAMIVL 170
7335701    74 MVGFILSIVHWLVLPFPGSLWHMGWSVLFTFAVSGVLVYVVLWAGWGSDSVFGLLGSVRGVSQMISYEVVFMFFVLLFSI 153
242543531  75 ILSLGLALLNWVVLPVPNVVASSNFSVLFTLFLSSVMVYTIVWAGWGSSSVYSLVGAIRAVAQMISYEVVIGFFFLFFLF 154
28436206   78 ILGFVLSLMNWFFIPTPFILFHSEYGILLTLVISSLLVYTTLWAGWGSNNIYSLIGGIRGVAQMISYEVVLGFFIMLLLL 157
48860550   78 ILSFILSLINWFFIPTPFILVNSEYGILITLVISSLLVYSTLWAGWGSNNIYSLIGGIRGVAQMISYEVVLGFFIMMMLL 157
284177721  77 LLGFVLSLMQWGVMSIPGSYVWSEYTVVITFVLSGLGVFIIMWCGWGSSNSYGFIGSIRGVAQMISYEVVFFFFVMIFMI 156
270267725  78 LFGFFLSIMNWLFIAVVFSIMAYESTVIFTLFIGSIMVYCVVWAGWGSNNTYSTIGAIRAVAQMISYEVVMGFFILLMIM 157
16117411  163 LAGGFTLHTFNL------AQETIWFLIpswplAMLWYISTLAETNRTPFDLTEGESELVSGFNIEYAAGPFALFFLAEYT 236
157384904 158 FAGSLDWDGLGLyygvggMGGTVWLVG-----VVLWVGIVLAELNRTPFDLVEGESELVGGYNVEYSGYGFTLFFLAEYM 232
157384926 157 FSGSLDWEGLGEyygvggVGATLWLVV-----VVIWGGIVLAELNRVPFDLVEGESELVGGYNVEYSGYGFTLFFLAEYM 231
57642245  171 LFGYPSWEGFLYyelhgnSFGLFWLTF------IAWIAVMLAELNRSPFDLVEGESELVSGFNVEYSGYGFTLLFLAEYM 244
7335701   154 EVWSYWLGGVC-------EGTGVFGIYfkfllVLVWGVIVLAELNRTPFDLVEGESELVSGFNVEYAGFGFTLLFLAEYM 226
242543531 155 YFKTFSWEGFF-------NTNQSFYNGfmfvlFFLWMVIMLAELNRTPFDLVEGESELVGGFNVEYSGCGFTFLFLSEYI 227
28436206  158 LMGSYNWEFFLY------FQSSYVFWGgmfmfMVSWIGMMLAELNRAPFDLIEGESELVSGFNVEYGGFIFALLFLGEYM 231
48860550  158 FFNSFNWDFFIY------YQKSSLFYGgffmfLVCWISIMLAELNRAPFDLIEGESELVSGFNVEYGGFIFALMFLGEYM 231
284177721 157 GIGVYSWGEML-------DKKVMGVMVmnvmlFFMWLVLILSELNRAPFDLVEGESELVSGFNVEYSGVGFTLLFLAEYM 229
270267725 158 SFGTFSWSMFHF------LNFGGMNFFlffflFFFWFCVILAELNRTPFDLVEGESELVGGFNVEYSGSGFTLLFLSEYV 231
16117411  237 NILMMNTLSVILFLGTsynpmmpqistlILMTKATLLTIISLWIRASYPRFRYDQLMHLVWKNFLPLSLAIILWHMALPL 316
157384904 233 NIWLLCWLSEVLYLGH------------NSMVGLVALVGGVVYVRGLLPRFKFTDLIVLTWRIYLPAVLWGCMVLLLLDM 300
157384926 232 NIWLLCWLSLVLFGGw------------NSLWMLVVAVVGVVYVRGLLPRYKFTDLIGLTWRIYLPIVLFGCMMMLLADA 299
57642245  245 NIWLMGFITALMFFGG------------SQIVLGTGVVFSGLYVRSMVPRLKSTDLIMLTWKTFLPFIILALILSTGLIL 312
7335701   227 NIWFISFLSTIFFFGFwd--------lfWYLLIGIIFVSLCLLVRCVLPRYKFTQLIDLMWKVLLP-CISFFLMCASVFL 297
242543531 228 NIWFMSSITIIIFFGLgslm-------lfdFFVISMVVMLVVFIRGMLPRYKFTDLIFLTWTVLMPMVVFIVMYGSGV-- 298
28436206  232 NIWFMSWITILLFFGGg----------yFLVIKSFVVVLVILYIRSLLPRFKFTDLIMITWKIYLPLVLMFFFVLIVWMS 301
48860550  232 NIWFMSWITILIFLGGn----------mFLVLLSFGVVMLILYIRSLLPRFKFTDLIVITWKIYLPLVLVFFVLLLGYFS 301
284177721 230 NIWFLCLISSVVFLNTv----------vHVVLGGVFLTLVVVLVRGLLPRYKFNQLIDLMWKVFLPITMLLLVISV---- 295
270267725 232 NIWFMGTLTVLMFFYSfsvfmmsfmlviSFV-------SFIIHIRSLLPRFKYFDLIFLTWKIMLPIVTMIFIFFILFI- 303
16117411  317 AT 318
157384904 301 GG 302
157384926 300 MC 301
57642245      --    
7335701   298 S- 298
242543531     --    
28436206  302 VQ 303
48860550  302 L- 302
284177721     --    
270267725     --    
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