Conserved Protein Domain Family
ND4

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MTH00127: ND4 
NADH dehydrogenase subunit 4; Provisional
Statistics
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PSSM-Id: 177186
View PSSM: MTH00127
Aligned: 523 rows
Threshold Bit Score: 623.516
Threshold Setting Gi: 255764542
Created: 9-Dec-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
68989184   17 LAPTKWLWPTTLLHSLLIAlaslswlknasetgwsslnpymatdPLSTPLLILSCWLLPLMILASQpNHtahepinrqrm 96 
45388052    1 MTPLHFSFSTA--------------------------------------------FILGFAGLAFHrKH----------- 25 
45388038    1 MTPAHFSFTLA--------------------------------------------FVLGISGLALHrKH----------- 25 
280978134   1 --------------------------------------------MIPVQITLSAMFILGFLGLTLQrKH----------- 25 
280978148   1 --------MAPLHFSFTLA------------------------------------FILGFSGLAFHrKH----------- 25 
280978386   1 MAPTHFSFTLA--------------------------------------------FILGFSGLAFHrKH----------- 25 
280978400   1 MTPTHFSFTLA--------------------------------------------FILGFSGLAFHrKH----------- 25 
280978442   1 MAPVHFSFTLA--------------------------------------------FILGFSGLAFHrKH----------- 25 
280978512   1 MTPAHFSFTLA--------------------------------------------FVLGISGLALHrKH----------- 25 
280978526   1 MTPLHFSFSAA--------------------------------------------FVLGFAGLAFHrKH----------- 25 
68989184   97 yislltslqfflilafsatemimfyvmfevtliptlilitrwgnqterlnagtyflfytlagslpLLVALLllqnsngsl 176
45388052   26 -----------------------------------------------------------------LLSALL--------- 31 
45388038   26 -----------------------------------------------------------------LLSALL--------- 31 
280978134  26 -----------------------------------------------------------------LLSALL--------- 31 
280978148  26 -----------------------------------------------------------------LLSALL--------- 31 
280978386  26 -----------------------------------------------------------------LLSALL--------- 31 
280978400  26 -----------------------------------------------------------------LLSALL--------- 31 
280978442  26 -----------------------------------------------------------------LLSALL--------- 31 
280978512  26 -----------------------------------------------------------------LLSALL--------- 31 
280978526  26 -----------------------------------------------------------------LLSALL--------- 31 
68989184  177 slltllhstppqlstyaakiwwtgCILAFLVKMplygvhlwlpkahveapiagsmilaavllklggygmmrilmtleplt 256
45388052   32 ------------------------CLEAMMLSL----------------------------------------------- 40 
45388038   32 ------------------------CLEAMMLSL----------------------------------------------- 40 
280978134  32 ------------------------CLESMMLAI----------------------------------------------- 40 
280978148  32 ------------------------CLEAMMLSL----------------------------------------------- 40 
280978386  32 ------------------------CLEAMMLSI----------------------------------------------- 40 
280978400  32 ------------------------CLEAMMLSL----------------------------------------------- 40 
280978442  32 ------------------------CLEAMMLSL----------------------------------------------- 40 
280978512  32 ------------------------CLEAMMLSL----------------------------------------------- 40 
280978526  32 ------------------------CLEAMMLSL----------------------------------------------- 40 
68989184  257 kelsypFIILALWGVIMTGSIcmrqtdlksliayssvSHMGLVvggiliqtpwGFTGALILMIAHGLTSSALFCLantny 336
45388052   41 ------YVATAMWSFQTGATI---------------------------------FSSAPMMLLAFSACEAS--------- 72 
45388038   41 ------YLAIALWA-----------------------HQMGVT----------GFSSAPMLLLAL--------------- 66 
280978134  41 ------YITMALW----------------------------------------SFN-----------SGSSMFSL----- 58 
280978148  41 ------YVAMALWS-FQTGSI--------------------------------IFSSAPMMLLAF--------------- 66 
280978386  41 ------YVAMALWSFQTGSA---------------------------------VFSSAPMMLLAF--------------- 66 
280978400  41 ------YIAMALWSFQTEAT---------------------------------AFSSAPMMLLAF--------------- 66 
280978442  41 ------YVAAALWSFQTGST---------------------------------VFSSAPMMLLAF--------------- 66 
280978512  41 ------YLAIALWA-----------------------HQMGVT----------GFSSAPMLLLAL--------------- 66 
280978526  41 ------YVATAMWSFQTGSTI---------------------------------FSSAPIMLLAF--------------- 66 
68989184  337 erthsrtmllarglqmalplmtawwfiaslanlalpplpnlmGELMIVTSlfnwswwtialTGLGMLITAGYSLYMFLMT 416
45388052   73 -------------------------------------------------------------AGLALLVAASRT------- 84 
45388038   67 -----------------------------------------------------------------SACEASAGLALLVAT 81 
280978134  59 ------------------------------------------GPMVLLTF---------------SACEASTGLALLVAT 81 
280978148  67 -----------------------------------------------------------------SACEASAGLALLVAT 81 
280978386  67 -----------------------------------------------------------------SACEASAGLALLVAT 81 
280978400  67 -----------------------------------------------------------------SACEASAGLALLVAT 81 
280978442  67 -----------------------------------------------------------------SACEASAGLALLVAT 81 
280978512  67 -----------------------------------------------------------------SACEASAGLALLVAT 81 
280978526  67 -----------------------------------------------------------------SACEASAGLALLVAT 81 
68989184  417 QRGPLPSHIMALEPSHTREHLLIALHLLPL 446
45388052   85 ----------------HGTDLLKNLNLLQC 98 
45388038   82 SRTHGTDHLKALNLLQC------------- 98 
280978134  82 SR-------------THGADLLKNLNLLQC 98 
280978148  82 SRTHGTDHLKNLNLLQC------------- 98 
280978386  82 SRTHGTDHLKNLNLLQC------------- 98 
280978400  82 SRTHGTDHLKNLNLLQC------------- 98 
280978442  82 SRTHGTDHLKNLNLLQC------------- 98 
280978512  82 SRTHGTDHLKALNLLQC------------- 98 
280978526  82 SRTHGTDHLKSLNLLQC------------- 98 
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