Conserved Protein Domain Family
ND4

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MTH00062: ND4 
NADH dehydrogenase subunit 4; Provisional
Statistics
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PSSM-Id: 214413
Aligned: 33 rows
Threshold Bit Score: 230.58
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
107735926   1 MYTYTVSFIKGCSYSFLFslvIWSFQACFDAWCYCVNSsLVNWLFIRDYLSFVMILLTVII-------MWLFIVIGLNSI 73 
12249164    5 FYWFIKGLIYSLLLGLIVw--CHQYCIGLSYSSINIC--LINGLFIRDCLSFLMVLLVVTI-------VWAFVVMGLSSM 73 
12249147    8 FSSFITGFVVTFIFLLIFy--SSIWVSDSSMVMVGVKYyLCDGLVIIDTLSCLMIFLTSII-------WLVLWLVGSKDI 78 
126215443   1 -----MGFICYCVLSL-----VLLQQSTYNDYIFIGLR--------FDNLFFILCLLVLFIsyfaivgFIENTLYNV--L 60 
107735983   1 MYSSSVWFIKGFSYSILIgiiVWVFQGCFSSCIFSYNTgLVSSIFIRDNLSFVMTLLTLSI-------MWLMIVADIRSF 73 
12249135    8 FYWFLTGFIVTFIYLLIFy--VWIWYSNCSMMILGVKNyLCGGWVILDNLSCLMLTLTLII-------CLVLWLVEVKSV 78 
123170296   1 MILWQILPLSTALLVLLA---LVTLTNGVNSHL------ILSEHISLDSFGVCLSIIPLFSvls-liiILGNDLSGINVA 70 
153127291   4 WQILPLSAALLVLLALVA------LTNGVNSHV------TLSEHISLDSFGVCLSIIPLFSvls-liiILGNDLSGINVA 70 
190349545   4 WQILPLSLLLLSSLLLIT------ITNGINSCI------IPNDWFLLDSFGFCLSIIPIFSils-liiIINNELSTLNVI 70 
237641919   8 WYSGLVGFVFVSLLWVVVvhvLFLQGLGLRAVSL-----AFGGVFCFDAISLYLVLLSALLcis--llFWWGGINFVSGV 80 
107735926  74 SIYISMFSAILIYVINNSLIFWFFYELSIICALYMLLKESLYPERYNASWYMGGYILLSSVPLLVCILIIGLAEGSFNVL 153
12249164   74 VLYLSMISAIIVSVVNNALLFWFFYELSIISALYLLVKNSLYPERYVASWYMIGYVLLSGVPLLICILLVSLSEGGFNIL 153
12249147   79 VLFISVFSAMITYVVSNSLVFWFFYELSIISALYMLIVGSPYPERYISSWYFGGYILLSSVPLLLGICFIGLNSGSFNVI 158
126215443  61 LLMLSCFFSILCFCANNLLMFWFSYEIAIISILFLLYSDSPYSDRYLAGWYLFAYSFFCGLPLLISILYLFINSG---YS 137
107735983  74 ALYVSIVSAIFVYFVNNVLVFWFFYELSIVSALYLLVKESYYPERYNASWYMGGYILVSSVPLLLCLLIISLVEGSLNVL 153
12249135   79 VLYISIASSMVTYVVSNSLVFWFFYELSIISALYLLIVNSPYPERYVSSWYFGGYIILGSVPLLVGICFVGLSNGSFNVI 158
123170296  71 FILLSSISSILCFNCNSFMLFFVTYELSIIFLLFSLFTGSPYSERGLAGWYFLGYLVVGGVPLLLLCIYNSLNSGELIVN 150
153127291  71 FILLSSISSILCFNCNNFMLFFVTYELSIIFLLFSLFTGSPYSERGLAGWYFLGYLVVGGVPLLLLCVYNSLNSGELIVN 150
190349545  71 LILLSSLCGVICFNCNSLMLFFVSYELSIIFLLFSLFTGSPYSERGLAGWYFLGYLVIGGVPLLLLCLYNSLDNAEMVLH 150
237641919  81 MIGLSLIFSLLCYCCINALWFWVFYEMXIVPLLVLLVLESPYSERYVASWYFLGYVIFTSLPMLLCFFYLSLSAGSFDLR 160
107735926 154 VWGSsnNMNLNLMYIIMIIVFCTKIPLVPFHSWLPVVHAEASSSTSIILSGYIMKLGLVGVVRLCsKWIWSSGIS--SVL 231
12249164  154 CWGNd-NNELSLLYFIMVIMFCTKIPLVPFHSWLPIVHAEASSPVSVVLSGYIMKLGIVGVLRVCsSWLVNNYVS--SVV 230
12249147  159 LWDKgdMCDSYGAFLLIIIMFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLC-GWLLIDYIY--YFS 235
126215443 138 GFDAsyDHKNSITNFVFWLLFITKIPLAPFHTWLPIVHAEASTITSICLSGYIMKLGLVGVIRFCyNVISEGFIY--YYL 215
107735983 154 FWSNc-SSDLRVVYIVIILMFCTKIPIFPFHSWLPIVHAEASSPVSIILSGYIMKLGLVGIIRICsGWVYGEDTQ--SIS 230
12249135  159 MWGNe-GSEISSMYLLIILIFLTKIPVFPFHGWLPLVHAEASSPVSIILSGYIMKLGLVGLVRLC-GCVLVDYLY--GYS 234
123170296 151 DPNS-------AINYILFLIFITKVPLFPFHSWLPIVHAEANSYVSIMLSGYIMKLGILGIVR---LFSSSGEVLk-VYL 219
153127291 151 DPNS-------AINYILFLIFITKVPLFPFHSWLPIVHAEANSYVSIMLSGYIMKLGILGIVR---LFSSSGEVLk-VYL 219
190349545 151 DHNS-------TINYVLFMLFITKVPLFPFHSWLPIVHAEANSFVSIMLSGYIMKLGILGIVR---LFSSSGELLk-LYL 219
237641919 161 VWGPm-NGVGLVIGVVLSVMFITKIPLFPFHVWLPIVHAEASSPVSVCLSGYIMKLGILGVCRFC-SAILPDLVFssGYV 238
107735926 232 EFIFLLSLGFLIWAYYEIDSKRWLGVLSLSHIMVSVVLLVYGCYDVNLLAYIFCLGHGFSVCGMFTLIWWGYNYVESRSW 311
12249164  231 AVIFMVSLVFMCWAYAEVDSKRWLAVLSLLHIVVSVVILIFGEYNTDLISLLYLYGHGCSVSAMFIFIWWGYSCILSRSW 310
12249147  236 TFLLCYSVVYLVAAVFECDSKRWLAYLSLSHILIGVCILLTSTYCGDYLAFIYCLGHGLSVALLFMVIWFGYEISGSRNW 315
126215443 216 SFLLLCSIFIFLTSLEELDFKRLLAMLSVSHISIGVVCLGVNTSSSLDKSLSFGLGHGLSAGYFFLLIMVLVCIGGGRDV 295
107735983 231 VMVFLISLMYLIWAYYEVDCKRWLAILSLSHIMVSVILIVFGCFNVNFLAYNYCLGHGFSVCGMFLLLWWGYELVGSRSW 310
12249135  235 IFLLGYSVVYLIAAMLECDAKRWLAYLSLSHMLIGMCILLSSSYCGDYYAFVYCLGHGLSVCLSFMIIWFGYEISGSRNW 314
123170296 220 ILFFLASCYFLVSSAIELDNKRWLAFLSLGHISIGVLGILSIPHSNEYLISSFSLGHGLSVICLFLYFSVQSGVVGSRNW 299
153127291 220 ILFFLASCYFLVSSVIELDNKRWLAFLSLGHISIGVLGILSIPHSNEYLISSFSLGHGLSVIYLFLYFSVQSGVVGSRNW 299
190349545 220 ILFFIASCYFLLYSLTELDNKRWLAFLSLGHISIGVLGILSIPHNNEYLLSSFSLGHGLSVIFLFFYFNIQSSMVGSRNW 299
237641919 239 LLCIFLSFLFFFSASRELDGKRWLAFLSLCHILIAAGCLCVGGYLLGGVSFVYCLGHGISAGLTFLFLWLSYEISGTRNL 318
107735926 312 LILASFYSFVPVIQVLCVLIFISVSGFPPTLQFFSEVILVWCSLIVsnDILTFIIWIYLFGSSLVGLLVLGLVLVYLFDN 391
12249164  311 LILSTVFCSVIFIQVVSVMVFMGASSFPPTLQFFGEVGVAVISLLSqdFVLILSAVMILFGGSLLGLMVLGLVINSLLDS 390
12249147  316 GILVKIFGGGLIMHFIMGFVFLNVCGFPPALQFFGELWLVINYITLgdIISLLLVSIYIFSGSIIGFIIYGLVICSPINT 395
126215443 296 NGVSNVNSWSISLIWFILIGFCMIASFPPMINFFIEAWLLGNVAKH--SGLTILICIYLFFSSLIPLCIMGLGFTRRVSD 373
107735983 311 LVLSSLMSVALVTQMICIFVFLGASSFPPTLQFLSEIILVWCSIIIndYPLMIVISLYLFGSSLVVLLLLGSIVIRLFSE 390
12249135  315 SILVKIIGGGLIMHVVAGFIFLNVCGFPPTLQFFGELWLVINYVTIsdFICLILVSIYIFSGSIIGFIVYGLIICSPGNM 394
123170296 300 VVILNNNNS--GVVWAISLGVLSLISFPPSILFFNEVFIFVSSIGV--QSVSYVFYLYILLGVIGPVCILSVILSRLSNT 375
153127291 300 VVILNNNNS--GMVWVISLGVLSLISFPPSILFFNEVFIFVSSIGV--QSVSYVFYLYILLGVIGPVCILSVILSRLSNT 375
190349545 300 IVMINNNNS--NMIWAIALGSLSLIAFPPSILFFNEVFIFISSVSI--QSVAHVFYIYILLGVIAPICALSVVLSRLSDS 375
237641919 319 FLLKSAVSGSLFLRVLACLCLCTVCSLPGTVQFFCEVQFLGEAFSKn-VMFGAVLFMYLFLGGLVPLFLMGTVLSRHWDV 397
107735926 392 SSIISCnnNNSLSVGIIYIVILMLSIFLII 421
12249164  391 NGIIVMg-INGLLVYVIYFMFIGLLMFMVV 419
12249147  396 SYEYSGg-LDNFLFCIMYLSLLNLILFIVL 424
126215443 374 YSLS----FSNKNALLLFNFVWMSVMLIIQ 399
107735983 391 TNIIRLngNNWIIVSIIYTIILCLLMFIFI 420
12249135  395 SYEYNGg-LDNLLSCIIYLSLLNLFLFIVI 423
123170296 376 SSLNCF--NINYMILLCGMVIFYLYTILI- 402
153127291 376 SSLNCF--NINYLILLCGMVIFYLYSILI- 402
190349545 376 SNINCL--NINYLILLCSMVIF-YLYFLII 402
237641919 398 SYSGRY--VFSGIISMGFLILWSFVLFLIV 425
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