Conserved Protein Domain Family
ND1

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MTH00040: ND1 
NADH dehydrogenase subunit 1; Validated
Statistics
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PSSM-Id: 214409
Aligned: 29 rows
Threshold Bit Score: 407.439
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
289183150   5 VYLFVYALGVVSLLVPILLAVALLTLLERKVLGYMQFRKGPNLVGPLGTLQPIADGLKLFIKENFKPSNANPIFFYLAPV 84 
5835459     2 NNNLIMLINIVNIIIPILIAVAFIVLIERKILGYMQLRKGPSIVGPSGTMQTIADGIKLFIKENLKPSSATPTLFFLSPA 81 
84488820    2 NNNIFLFINTLNIIIPILISVAFIVLIERKILGYMQLRKGPNIVGPYGIIQTIADGIKLFIKENTKPSSASTTLFFFSPA 81 
84488723    2 NTPTTTIINTINFIIPVLIAVALIVLVERKILGYMQLRKGPNLVGPYGTLQTIADGIKLFIKENLNPSTSSPTIFLLAPA 81 
57854568    1 MSVLLLFLNSVGFIVPVLLAVALLTLIERKVLGYMQLRKGPNIVGPYGLLQPIADGFKLLIKETLKPSNASPYLFYSSPA 80 
49147343   12 YTSILFVFNLILFIIPVLLAVALLTLLERKTLGYMQFRKGPNLVGPLGLLQPFADGMKLFIKENFKPSSSTPIIFILAPP 91 
188039025  12 LISIIELVNVILFIIPVLLAVAILTLLERKTLGYMQFRKGPNLVGPMGLLQPFADGMKLFIKENFKPSNSTPLFFIISPP 91 
188039041   2 NNIIILLSNIINVILPVLLSIAFIVLIERKILGYMQLRKGPAIVGPYGIIQTVADGIKLFIKENLKPLSATPALFFFSPA 81 
289183206   8 GSGFFYFLNLLFLVIPVLLSVAILIFLERKVLGFIQFRKGPNLVGPYGIFQSFADGLKLFVKENFSPSSSNSFLYFFSPV 87 
289183179  10 LYVPLIFVNFLGVLVPILLAVAFLTLLERKVIGYMQFRKGPNLVGPWGILQPIADGLKLFIKESVKPSNASPILFFLSPA 89 
289183150  85 VFFLIALLLWSVVPLEESNVSVNLSLLFVISISSLSVYGVLSAGWSSNSKYSLLGAIRGVAQMISYEVSLGLVLLSLVIL 164
5835459    82 LFLLLALILWTIIPCPNPNINVNLSLILILGISSLSVYSLLGTGWASNSKYSLIGGIRAVAQTISYEISISIILLSLIIL 161
84488820   82 LFLILALILWTIIPCPNPLININLSLILILGISSLSVYSLLGSGWASNSKYSLIGGIRAVAQTISYEISIGTILLSIVLL 161
84488723   82 LFLLLALTMWAIIPCPQPTLNINLSLILILGISSLSVYSLLGSGWASNSKYSLLGGIRSVAQTISYEISMGLILLSIVII 161
57854568   81 LFLFLAILLWSIIPVGQSTLNFNLSLVLILGLSSLSVYSLLGSGWSSNSNYSFLGGVWAVAQTISYEISLGLILLSVVIY 160
49147343   92 IFFFLSILLWSVAPISSSGLNFTLSLLFVITFSSLSVYSILGAGWASNSKYALLGAIRAVAQTVSYEVSFGLILLPLIFY 171
188039025  92 IFIFLSLLLWSVAPINASGLNIVLSLLFVITFSSLSVYAILGAGWASNSKYALLGALRAVAQAISYEVSFGLILLPLIII 171
188039041  82 LFLILALLLWTIIPCNNPLININLSLLLILGISSLSVYSLLGSGWASNSKYSLIGGIRAVAQTISYEISIGTILLSIIIL 161
289183206  88 LFLFISILLWGVIPVSTSGVNICLSVLFVITLSSLSVYGILGAGWSSNSKYSLLGSVRAVAQVISYEVSFGLILISLVVL 167
289183179  90 IFFFIALILWGMVPMMVAGINLSLSLLFLITLSSLSVYAILGSGWASNSKYALLGAIRGVAQTVSYEVSFGLILLPLVFI 169
289183150 165 VGGWSFYSSLEIQGvSVWSIIPCLPLFLLWYISTLAETNRSPFDLAEGESELVSGYNVEYAGAPFALFFIGEYANIILMN 244
5835459   162 TGTFNLNAIINAQN-NSWLIFSCIPLSYIWYISSLAETNRTPFDLTEGESELVSGYNVEYAGGPFALFFLAEYANIIFIN 240
84488820  162 AGTFNLNSIINAQN-NSWFLFSCLPLSYIWYISTLAETNRTPFDLTEGESELVSGYNVEYAGGPFALFFLAEYANIIFMN 240
84488723  162 AGSFNINSIQNTQQ-NSWFILSCLPLSYIWYISTLAETNRTPFDLTEGESELVSGYNVEYAGGPFALFFLAEYANIMFMN 240
57854568  161 SGGFNISLISNSQE-DCWLGICCFPLFSIWFISTLAETNRAPFDLTEGESEIVSGYNVEYAGGPFALFFIAEYANIIFMN 239
49147343  172 VGGWGLSNFLFVQSlGIWIIVPCFPLFIMWFISSLAETNRTPFDLAEGESELVSGYNVEYAGAPFALFFIGEYANIIFIN 251
188039025 172 AGGWSLLSFSLLQNlGVILLVPCLPLFFMWFISSLAETNRTPFDLAEGESELVSGYNVEYAAAPFALFFIGEYANIIFIN 251
188039041 162 SGTFNLNSIINSQN-NSWFLFSCLPLSYIWFISTLAETNRTPFDLTEGESELVSGYNVEYAGGPFALFFLAEYANIIFIN 240
289183206 168 VGSWGFFSFFEFQSfGVLMVFPCFPLFLMWYISSLAETSRTPFDLSEGESELVSGYNVEYSGAPFAFFFIGEYANIIFIN 247
289183179 170 VGGWSFILFSNE---GLFLAFPLFPLLLMWYISSLAETNRAPFDLTEGESELVSGYNVEYAGAPFALFFIGEYANIIIMN 246
289183150 245 VVSVILFLGGGSLFvyNnVFLLSLLCLSFKAIFLVFSFLWVRASFPRVRYDQLMMLMWKGFLPISISLIIWYFVLITLLG 324
5835459   241 LLSTILFLGGNLPI--N-IFPINIIIIAIKTSILSSTFLWVRASFPRFRYDQLMFLTWKSYLPFSISFLLWNIILINSIN 317
84488820  241 LLSTLLFLGGNLPIn---IFPLNLFILALKTSILSSIYLWIRASFPRLRYDQLMFLNWKSYLPFSIGFLLWNIILLSSIN 317
84488723  241 LLSVIIFLGGNSPI--S-ITPINIIIIAIKTGILSSIFLWSRASFPRFRYDQLMFLTWKNYLPASISFIIWNLLIISSIN 317
57854568  240 LFSVLLFLGGSSPV--SlVFPINILSLILKTAGLVVLFLWVRASYPRFRYDQLMYLTWKKYLPLSLSLLILFSFLLSLNN 317
49147343  252 LLTAILFLGVVN----QsFFLITIITTTIKALFLVFVFLWVRASFPRIRYDQLMALMWKAFLPLTISLLITYFLIVIVLN 327
188039025 252 LLTVILFLGTIS----SeIALINIILVVIKTTFLVFSFLWIRASFPRIRYDQLMTLMWKAFLPLTISFLLCYFSISLIVG 327
188039041 241 TLTSIIFLGGNLPI--N-LFPINIINIAIKTAILSSIFLWIRASFPRFRYDQLMFLNWKSYLPFSIGILIWNIIIINIIN 317
289183206 248 IVSVLLFLNPVLFF--NnVFLL-IMFLGIESVLMILSFLWVRASFPRVRYDQLMMIMWKNFLPLSIGLIIFYVFIIFFFF 324
289183179 247 LVSVILFLGCGAPF--N-IFVLGLIMMGIKTTFLVFSFLWVRSSFPRIRYDQLMMLMWKNFLPLSIGFLVAYYLSLSMIV 323
289183150 325 GIPVHY 330
5835459   318 NAIPNT 323
84488820  318 ITPPNT 323
84488723  318 ILPPNT 323
57854568  318 GLPVGL 323
49147343  328 IIPPHY 333
188039025 328 NLPPHY 333
188039041 318 NIPTNT 323
289183206 325 GFPSFY 330
289183179 324 GVPSFY 329
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