Conserved Protein Domain Family
KOG2005

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KOG2005: KOG2005 
KOG2005, 26S proteasome regulatory complex, subunit RPN1/PSMD2 [Posttranslational modification, protein turnover, chaperones]
Statistics
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PSSM-Id: 229944
Aligned: 8 rows
Threshold Bit Score: -1
Created: 21-Jun-2003
Updated: 16-Jan-2013
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15235308    1 MAPVPDPNSVGGGAKRDEATTKIPSKDSKKKDDKKEEDLSEEDLQLKQNLELYVERVQDPNPELQKIALESMRKEIRDST 80   thale cress
25348002    1 MAPTQDPNSVGGGAKKDEATLKVPSKDPKKKDEKKDEDLSEEDLELKQNLELYVERVQDPNPELQKAALESMRQEIRAST 80   thale cress
15236408    1 -------------------------------------------------------MVQDPNPDLQKAALESMRQEIRALT 25   thale cress
17542008    1 --MVATTQQTPKEA----DKKKADDKKVPEKAEPKKEEMSEEDQKLEEDLNLLVQRLSEPDTTLYKPSLETMRTLIRAST 74   Caenorhabditis el...
19074108    1 --------------------------------------------MEEGELKIIVERIQDPDIDIQNNALNMLFDVTKSSH 36   Encephalitozoon c...
19861832    8 SKSPSGNDALNDKKGTKTSETNDRNSTNNTKERDELEDLSEEDLQLKNDLELLVQAVQDATPELVGSSLTQLKEIIRTST 87   fission yeast
731642      6 DK----KQQTIDEQSQISPEKQTPNKKD--KKKEEEEQLSEEDAKLKTDLELLVERLKEDDSSLYEASLNALKESIKNST 79   baker's yeast
6174930     7 DKAPVQPQQSPAAAPGGTDEKPSGKERRDAGDKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSST 86   human
15235308   81 SSMTSVPKPLKFLRPHYGVLKEFHAKMAESDLKKMLADILSVLALTMSAEGERicvlwflvefdlsylllilcyailfqe 160  thale cress
25348002   81 SSMTSVPKPLKFLRPHYGTLKAFHETMADSDLKKYLSDILSVLALTMSADGERe-------------------------- 134  thale cress
15236408   26 SSMTSVPKPLKFLRPQYVTLKAFHETMADSNLKKYISDILSVLALTTLYRLHYflitrr--------------------- 84   thale cress
17542008   75 TSMTSVPKPLKFMRPHYNKMKEIFTSIVAPDVKKLCADIISVLAMTSDERTDT--------------------------- 127  Caenorhabditis el...
19074108   37 SKSIDTIN-FQYLADNLDVLEDVCKRLE-GNKKRWLCDIISAICVVDDERKLL--------------------------- 87   Encephalitozoon c...
19861832   88 SSMTAVPKPLKFLRPHYFTLVKIYDSWPQSPQKTQLADILSVLGMSYSNTSKHe-------------------------- 141  fission yeast
731642     80 SSMTAVPKPLKFLRPTYPDLCSIYDKWTDPNLKSSLADVLSILAMTYSENGKHd-------------------------- 133  baker's yeast
6174930    87 TSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKRFAADIISVLAMTMSGEREC--------------------------- 139  human
15235308  161 sLNYRLNGSESDIGSWGHEYVRNLAGEIAKEYTI-RQGEES---------------------SIEDLMDLVQQIVSFHMK 218  thale cress
25348002  135 sLRFRLIGTEGDIGSWGHEYVRNLAGEIAQEYTK-RQSEEA---------------------SIDDLMELVQQIVAFHMK 192  thale cress
15236408      --------------------------------------------------------------------------------      thale cress
17542008  128 -INYRILGSHEPIGDWGHEYVRHLAMEMSEEWKK-EGTSDA---------------------RKAELLKLTQDIVSHHMK 184  Caenorhabditis el...
19074108   88 --AYRVEGNIIDLKEWGHLYVKKLIGCIADVKNN--KMDFP----------------------FAKTRDVGRECIDFLFK 141  Encephalitozoon c...
19861832  142 sLKYRLQGVTTDPSLWGHEYVRHLASEIEEEFASrQEEEAP---------------------T-DDLMELALTIVPFFLT 199  fission yeast
731642    134 sLRYRLLSDVSDFEGWGHEYIRHLALEIGEVYNDqVEKDAEdetssdgsksdgsaatsgfefSKEDTLRLCLDIVPYFLK 213  baker's yeast
6174930   140 -LKYRLVGSQEELASWGHEYVRHLAGEVAKEWQElDDAEKV---------------------QREPLLTLVKEIVPYNMA 197  human
15235308  219 HNAETEAVDLLMDVEDLDLLLEHVDNTNFRRTCNYLTSAAKYLPGPDDMLVLDIAYMIYIKFAEYPNALQIALFLDNMQY 298  thale cress
25348002  193 HNAETEAVDLLMDVEDLDLLLEHVDKTNFKRTCNYLTSAARYLPGPDDMLVLDISYMIYMKFEEYPNALQIALFLDNTQY 272  thale cress
15236408      --------------------------------------------------------------------------------      thale cress
17542008  185 HNAEVEACDLLIEIERIDLLISYVQEVDHQRVCLYLLSCAPLTPDPDNIILIRTALQLYLKFNRYLEAVRCAIMVNDIPQ 264  Caenorhabditis el...
19074108  142 HNAEFEAIDFLVEVGGIETVLDYVDTHNYNRIVLYLEDMNSFV---D---LEEVILKIYLKMGDHSRYVVGLIRRQKSKE 215  Encephalitozoon c...
19861832  200 HNAEADAIDLLQELGAIEKVVPFVELDNASRVCLYITSCVNLLPFPEDVAMLRTAHAIYRKFDQLTQALNVAIRLDDMSL 279  fission yeast
731642    214 HNGEEDAVDLLLEIESIDKLPQFVDENTFQRVCQYMVACVPLLPPPEDVAFLKTAYSIYLSQNELTDAIALAVRLGEEDM 293  baker's yeast
6174930   198 HNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMEL 277  human
15235308  299 VKQVFTSCTDLVKKKQFCYMIARHGMTFELDqemvAndedKEALQDIVNNSKLSEGYLTLARDIEVMEAKTPEDIYKAHL 378  thale cress
25348002  273 VKQVFTSCTDLLKKKQFCYMIARHGITFELDdemvAddddREALQDIVNNTKLSEGYLTLARDIEVMEAKTPEDIYKAHL 352  thale cress
15236408      --------------------------------------------------------------------------------      thale cress
17542008  265 VHQIFAKASDPLLRKQMAILLGRHQIFLDY-----EgsadSDALAELNSNAHLYEYFHSLARELDIMEPKTPEGIYKSHL 339  Caenorhabditis el...
19074108  216 AIEYVRSIEDRDYKKQCLYILARCNLYYEAS---------DPEEKYILSNGYIKDVYREIGAELEIDKPSKMDAILKGFK 286  Encephalitozoon c...
19861832  280 IKEDCEAATDPLLKKQMSYMLARQQIPMDMG----D-----EELNDALNNTHLSDHFHYLGKELNLMDPKVPEDIFKTHL 350  fission yeast
731642    294 IRSVFDATSDPVMHKQLAYILAAQKTSFEY-----------EGVQDIIGNGKLSEHFLYLAKELNLTGPKVPEDIYKSHL 362  baker's yeast
6174930   278 VEDIFTSCKDVVVQKQMAFMLGRHGVFLELS----EdveeYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHL 353  human
15235308  379 LDGR-ASSGPSVDSARQNLSATFVNAFVNAGFGQDKLMTVPSDstsgSAGNWLFKNKEHGKTSAVASLvylilldklisy 457  thale cress
25348002  353 LDGR-ASSGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDsttgSSGNWLFKNKEHGKTSAAASL------------ 419  thale cress
15236408      --------------------------------------------------------------------------------      thale cress
17542008  340 EHSRpFGNSAQPDSTRMNLAAALVNGFVNCGFGVDKMMAETE-----EASRWFYKNKEYGMLTAAASQ------------ 402  Caenorhabditis el...
19074108  287 YDKD-------T---RQLASIGIANGFVHMGYGRDPIFLPQEGd---SRVPLDYEAILGCDVPDLISVfg---------- 343  Encephalitozoon c...
19861832  351 EVARtGLGASGVYSAKQNLANTFVNALVNAGYSNDRLILVDDE-----KTSWIYKNKESGLISATASI------------ 413  fission yeast
731642    363 DNSKsVFSSAGLDSAQQNLASSFVNGFLNLGYCNDKLIVDND--------NWVYKTKGDGMTSAVASI------------ 422  baker's yeast
6174930   354 ENNRfGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLTD-------DGNKWLYKNKDHGMLSAAASL------------ 414  human
15235308  458 vfileGMIQLWDVETGLGHLDKYFHSNDNPVVAGALLGVGIVNCGIKN-DCDPAFALLSGYIDNEDSSVRIGAIMGLGIA 536  thale cress
25348002  420 -----GMIQLWDVDSGLSQLDKYFHSNDNPIIAGALLGVGIVNCGIKN-DCDPALALLGDYIDKEDSSVRIGAIMGLGIS 493  thale cress
15236408      --------------------------------------------------------------------------------      thale cress
17542008  403 -----GLIWRWDIDTGLAQCDRFLYINDDYIKAGTLLAIGIISSGIQD-ACDPASALLLDHVQSDRSIMRVGSILGLGLA 476  Caenorhabditis el...
19074108  344 ---siGVIESWNSEKVMETLQEHIFADFSYRKTGSLLGLALSGLRNFE-ERPAILALLSNNLQSSSSIHVIATLLGIEAM 419  Encephalitozoon c...
19861832  414 -----GLLQLWNVDMGLSLLDKYLYSSEENTKAGALLGIGVTNVAVRN-EADPAMAILSEYLETGSVKLRASAILGLGLA 487  fission yeast
731642    423 -----GSIYQWNLD-GLQQLDKYLYVDEPEVKAGALLGIGISASGVHDgEVEPALLLLQDYVTNPDTKISSAAILGLGIA 496  baker's yeast
6174930   415 -----GMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRN-ECDPALALLSDYVLHNSNTMRLGSIFGLGLA 488  human
15235308  537 YAGSQNDQIKi--------rLSPILNDANAP--LDVIAFAALSLGMIYVGSCNEEVAQSIIFALMDRSEAELGEALTRFL 606  thale cress
25348002  494 YAGSQNDQVLir------nkLSPILNDAKAP--LDVIAFASLSLGMIYVGSCNEEVAQSIIFALMDRSEAELGDALTRFL 565  thale cress
15236408      --------------------------------------------------------------------------------      thale cress
17542008  477 YANSKRETVTkneergvifeLKKVLSDQKPSaiPEVKGLAGLSLGLILVGTADAEAAMEMLQALMDKSETELTDPNMRFL 556  Caenorhabditis el...
19074108  420 FSGTQAEevr--------elLQPLMFSDSSE----VVFFTSFTLGSVFCGSADEDLTSLMLQTFVEKGK-ESETQFFRFL 486  Encephalitozoon c...
19861832  488 YSGANREdll--------dmLSPIVTDTDCP--MQLSCLAALSLGLIFVGTCNGDVASTILQTLMEREESAQNDQWGRFM 557  fission yeast
731642    497 FAGSKNDevl--------glLLPIAASTDLP--IETAAMASLALAHVFVGTCNGDITTSIMDNFLERTAIELKTDWVRFL 566  baker's yeast
6174930   489 YAGSNREdvl--------tlLLPVMGDSKSS--MEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETELKDTYARWL 558  human
15235308  607 PLGLGLLYLGKQvgsqsyliiflvrESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVSDqfsltlqtiqtiqv 686  thale cress
25348002  566 PLGLGLLYLGKQ-------------ESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKV---------------- 616  thale cress
15236408      --------------------------------------------------------------------------------      thale cress
17542008  557 ALGIALIFLQTQ-------------DKSDVFVESLRSLPDPFGAMVSTLVEVCAYAGTGNVLKI---------------- 607  Caenorhabditis el...
19074108  487 MLGLASLFYRRK-----------------DVECGIMEIGGALSKHESILIKGFQYVGTGDSNVIES-------------- 535  Encephalitozoon c...
19861832  558 ALGLALLFNGKQ-------------DLADATVETLKAIEGKIARQAEILVDICSYAGTGNVLHIQKll------------ 612  fission yeast
731642    567 ALALGILYMGQG-------------EQVDDVLETISAIEHPMTSAIEVLVGSCAYTGTGDVLLIQDll----------hr 623  baker's yeast
6174930   559 PLGLGLNHLGKG-------------EAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKV---------------- 609  human
15235308  687 QDLLAQCGEHLVKGDIHQG------------------------------------------------------------- 705  thale cress
25348002  617 QDLLAQCGEHLEKGDIHQG------------------------------------------------------------- 635  thale cress
15236408      --------------------------------------------------------------------------------      thale cress
17542008  608 QKLLHLCSEHYETPAAEKKtaasrgprgpapaaatparpaaqpgnvnvagtpaptgtpava-----------paaprrdl 676  Caenorhabditis el...
19074108  536 ILTDSFTGDTDALLES---------------------------------------------------------------- 551  Encephalitozoon c...
19861832  613 ----hICSEPPSDDakese------------------------------------------------------------- 627  fission yeast
731642    624 LTPKNVKGEEDADEEETAEgqtnsisdflgeqvneptkneeaeievdemevdaegeevevkaeitekkngeslegeeiks 703  baker's yeast
6174930   610 QQLLHICSEHFDSKEKEEDkdkkekkdkdkk------------------------------------------------- 640  human
15235308  706 ----------------------------------PAVIGLAMVAMSEELGLDMEIRSLERVLQYGEQNIRRAVPLALGLL 751  thale cress
25348002  636 ----------------------------------PAVLGLAMVAMSEELGVDMEIRSLERMLQYGEQNIRRAVPLALGLL 681  thale cress
15236408      --------------------------------------------------------------------------------      thale cress
17542008  677 pgaasaatpgapetaaadatpappakpdlssqqaVAVLGIGLIAMGDDIGSQMALRMFGHLIRYGEPVIRRAVPLALSLL 756  Caenorhabditis el...
19074108  552 ----------------------------------LGLLSCALVSMGDETSSQMVGRIVSSSLLLDSSHLRSVLPLCYSIL 597  Encephalitozoon c...
19861832  628 -----------------------------ttiqtFAALGVATIAMGEDIGAEMVLRHFDHMMHYGEPSIRKAIPLALGLL 678  fission yeast
731642    704 eekkgkssdkdattdgknddeeeekeagivdelaYAVLGIALIALGEDIGKEMSLRHFGHLMHYGNEHIRRMVPLAMGIV 783  baker's yeast
6174930   641 -----------------------eapadmgahqgVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALI 697  human
15235308  752 CISNPKVTVMDTLSRLSHDTDSEVAMAAIISLGLIGAGTNNARIAGMLRNLSSYYYKDASLLFCVTfydfflsfhgintv 831  thale cress
25348002  682 CISNPKVTVMDTLSRLSHDTDSEVAMSAIISLGLIGAGTNNARIAGMLRNLSSYYYKDMSLLFCVR-------------- 747  thale cress
15236408      --------------------------------------------------------------------------------      thale cress
17542008  757 SVSNPQLNILETLSKFSHDSDADTAHNAIFAMGLVGAGTNNARLVAMLRNLASYHYKDQVSLMLVR-------------- 822  Caenorhabditis el...
19074108  598 YPSNPQVNVLDMLEKSLNIGETNCIISTIVSLGLIGAGTLNSRITKILDQQYSYYYKDSKVLPVLK-------------- 663  Encephalitozoon c...
19861832  679 SASNPQMRIFDTLSRYSHDNDLDVAYNAIFAMGLVGAGTSNARLAQLLRQLASYYHKESNALFMVR-------------- 744  fission yeast
731642    784 SVSDPQMKVFDTLTRFSHDADLEVSMNSIFAMGLCGAGTNNARLAQLLRQLASYYSREQDALFITR-------------- 849  baker's yeast
6174930   698 SVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVR-------------- 763  human
15235308  832 stydrlVLIVLSHnagahrsrvcaYGKGSLNSQSFPLRTALAMPTALAGIVTLLHACLDMKsIILG-KYHYVLYFLVLAM 910  thale cress
25348002  748 ------IAQGLVH-----------MGKGLLTLSPFHSERFLLSPTALAGIVTLLHACLDMKpIILG-KYHYVLYFLVLAM 809  thale cress
15236408      --------------------------------------------------------------------------------      thale cress
17542008  823 ------IAQGLTH-----------LGKGTMTLNPWHSDRQLLSPSALASLLSICFSFLDANnTILNnRQHYLLYTLVLAM 885  Caenorhabditis el...
19074108  664 ------IAQGLVS-----------LGKGLLSISPLYFDKTTFMPKNTIGLFSTVFMLLDSS-ISPLvSSHAYMFFLLCQA 725  Encephalitozoon c...
19861832  745 ------IAQGLLY-----------LGKGTMTLNPYHTERQILGQTAFAGLMTVVLAMLDAN-TFVLdTSHWLLYAITLAI 806  fission yeast
731642    850 ------LAQGLLH-----------LGKGTMTMDVFN-DAHVLNKVTLASILTTAVGLVSP--SFMLk-HHQLFYMLNAGI 908  baker's yeast
6174930   764 ------LAQGLTH-----------LGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRnIILG-KSHYVLYGLVAAM 825  human
15235308  911 QPRMMLT-VDQSLKP-----ISVPVRVGQAVDVVGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYvVPLIPLLHYpt 984  thale cress
25348002  810 QPRMMLT-VDENLKP-----LSVPVRVGQAVDVVGQAGRPKTITGFQTHSTPVLLAAGERAELATDKY-IPLSPILEG-- 880  thale cress
15236408      --------------------------------------------------------------------------------      thale cress
17542008  886 QPRMLTTlVEDEMKPgslkqLNVSVRVGQAVDVVAQAGKPKTITGFQTHTTPVLLAHGERAELANDEY-LSVTPHLEG-- 962  Caenorhabditis el...
19074108  726 CTQKYVT----CSEK-------INIRVGHPINTVGMVGEPKKLSSVQTHTSPVVLSEKIRAETDENVC----SSYIED-- 788  Encephalitozoon c...
19861832  807 RPRMLIT-LGEDGQY-----LPVSVRVGQAVDVVGQAGRPKVITGWVTHTTPVLLHHNERAELATEAY-TPLTS-LEG-- 876  fission yeast
731642    909 RPKFILA-LNDEGEP-----IKVNVRVGQAVETVGQAGRPKKITGWITQSTPVLLNHGERAELETDEY-ISYTSHIEG-- 979  baker's yeast
6174930   826 QPRMLVT-FDEELRP-----LPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEF-LPVTPILEG-- 896  human
15235308  985 rnktlFYILESKKTLLL 1001 thale cress
25348002  881 -----FIILKEnpdyre 892  thale cress
15236408      -----------------      thale cress
17542008  963 -----LVILKKNPDYQP 974  Caenorhabditis elegans
19074108  789 -----VLILKKN----- 795  Encephalitozoon cuniculi
19861832  877 -----IVILKKNTEDIE 888  fission yeast
731642    980 -----VVILKKNPDYRE 991  baker's yeast
6174930   897 -----FVILRKNPNYDL 908  human
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