1FFX,1JFF


Conserved Protein Domain Family
KOG1376

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KOG1376: KOG1376 
KOG1376, Alpha tubulin [Cytoskeleton]
Statistics
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PSSM-Id: 229318
Aligned: 44 rows
Threshold Bit Score: -1
Created: 21-Jun-2003
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1FFX_A     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDD---------SFNTFFSETGAGKHVPRAVFVDLE 71  cow
7300328    4 KGEIIQIHIGQAGVQIANACWELFCLEHGILANGRLTQSPMDDSFLT-----------FFEFTS-HQPCVQPRLVMIDTE 71  fruit fly
19074542   1 MREIISLHIGQAGVQIGNACWELYCKEHGILPNGQ----LDQNKMDDe--------SAESFFSPTSVGTYVPRTLMVDLE 68  Encephalitozoon cun...
13376181   1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENakmehtnasfD--TFFCETRAGKHVPRALFVDLE 78  human
13376539   1 ----------------------------------------------------------------------MRHQQTERQD 10  human
30154709   1 MREHISIHVGRADGQIDNPCSELCGLEHGMQPDGQVPS-DKTTRGDD---------SFN-IFGETGAGKHKPRAVFVDLE 69  human
29741994   1 ----------MVNTWLAACCTMMLYHEVHGKYMYLLPDVPDVPKYVN---------------AGIVTLRTNHSIHFVDWC 55  human
20532817     --------------------------------------------------------------------------------     human
21450790   1 ----------------------------------------------------------------------MRKMQLS--- 7   human
21450790   1 ----------------------------------------------------------------------MRKMQLS--- 7   human
1FFX_A    72 PTvIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTS 151 cow
7300328   72 PTvIDEIRTGSYRNLFHPDTLITGKDDSGSNFARGYNLMASELLDRSMNAIRRVADRCRNLRGFLVFRAIGGGSGSGLGT 151 fruit fly
19074542  69 PGvLDSIKTGKYRELYHPGQLISGKEDAANNYARGHYTVGKEIIEPAMEQIRRMADSCDGLQGFLIYHSFGGGTGSGFAS 148 Encephalitozoon cun...
13376181  79 PTvIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSEVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTS 158 human
13376539  11 PSqPLSRQHGTYRQIFHPEQLITGKEDAANNYAWGHYTIGKEFIDLLLDRIRKLADQCTGLQGFLVFHSLGRGTGSDVTS 90  human
30154709  70 PTfIDKIH------LFHPEQLITGKEDAANNYAQGHYTIGEEITGLMLDQILKLANQCTSLQGFLVFHSFGWGTGSGFTS 143 human
29741994  56 PT---GFKVG---INYQPPNVVPGGDLAKVQRAVCMLSN---TIAIAEAWAHLDHKFDLTYAKYAFFHWYMG-EGMDERV 125 human
20532817   1 -----------------------------------------------------------------MVSAVSDPPTSTTGS 15  human
21450790   8 -GnGLEEQAAQ-----HLDELLLAHTDLKS-------------LDLSYNQLNDQADLCMGLQGFLIFHSFGGGTGSGFVS 68  human
21450790   8 -GnGLEEQAAQ-----HLDELLLAHTDLKS-------------LDLSYNQLNDQADLCMGLQGFLIFHSFGGGTGSGFVS 68  human
1FFX_A   152 LLMERLSVDYGKKS-KLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL 230 cow
7300328  152 RIMERLVEDFGKKMtVVEFLVYPSPSISPVIVEPYNALLAAHFSMDCADVSFIVDNEALYDICANTLNVPAPTYTNLNRI 231 fruit fly
19074542 149 LMMDRLAAEFGKKS-KLEFSVYPAPKIATAVVEPYNSILTTHTTLDYSDCSFLVDNEAIYDMCR-NLGIQRPYYTDINRV 226 Encephalitozoon cun...
13376181 159 LLMERLTGEYSRKT-KLEFSVYPAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRL 237 human
13376539  91 FLMEWLSVNYGKKS-KLGFSIYPAPQVSTAMVQPYNSILTTHTTLEHSDCAFMVDNKAIYDICHRNLDIERPTYTNLNRL 169 human
30154709 144 LLIECLSLHYGKKS-KLEF-IYSVSQVSKAVVEPYSSILTTHTTLERSECSFVT-------------------------- 195 human
29741994 126 PQMPASARHISKRQlPACLTSQTSTCKSKTLGLP-AEKTESRCIWVGPAFSLPTGSPGSHGRTRQRGILPHPIFRHTGKE 204 human
20532817  16 TMCECISIHVGQAGvQMGNACWELYCLEHDIQP--SGTMPSHKALGSSDNSFNTFFRETQPGRHVSWAVCGP-----GAC 88  human
21450790  69 LLMKRLSVDYGKKS-KLEFAICPAPQVSMAMTEPYNSILTTYTTLEHSDCAFIVNSKATYDMSAQPG--HRVSHVHQPQS 145 human
21450790  69 LLMKRLSVDYGKKS-KLEFAICPAPQVSMAMTEPYNSILTTYTTLEHSDCAFIVNSKATYDMSAQPG--HRVSHVHQPQS 145 human
1FFX_A   231 IGQIVSSITASLRFDGALNVDLTEFQTNLVPYPrahfpLatYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHG 310 cow
7300328  232 IAQVVSSFTASQRFGGGSTVSFQELQTNLVPYPrihypLinYAPLVPISHSQFVNMSTAQLTGQCFQMSNQMVRCNPSHG 311 fruit fly
19074542 227 IAQVVSSITASLRFPGSLNVDLTEFQTNLVPYPrihfpLvaYSPMLSKEKAAHEKLSVQEITNACFEPQNQMVRCDTRKG 306 Encephalitozoon cun...
13376181 238 VVQVVSSITASLRFEGPLNVDLIEFQTNLVPYPrihfpMtaFAPIVSADKAYHEQFSVSDITTACFESSNQLVKCDPRLG 317 human
13376539 170 ISQIVSSITASLRFDGALNVDLTEFQTNLVSYLtstspWppMHQSSLQKKYTTSSCRWQRLPMPALSLPTRW-------- 241 human
30154709     --------------------------------------------------------------------------------     human
29741994 205 QNFVLQKSRCRWLWTSPYRHGMLSFLTLGVEQP-----E--DASAGSFLPTLHLTRTRSVFVSDSWRGQ------DPGHC 271 human
20532817  89 CHRLASTTSPPQWCPGVL-------------------------------------------------------------- 106 human
21450790 146 SGQIVSSITASL-------------------------------------------------------------------- 157 human
21450790 146 SGQIVSSITASL-------------------------------------------------------------------- 157 human
1FFX_A   311 KYMACCLLYRGDVVPKDVNAA-IATIKTKRTIQFVDwcptgfkvginyeppTVVPGGDLAKVQRAVCMLSNTTAIAEAWA 389 cow
7300328  312 KYMASVLLYRGDIAPNEINTA-LENIKRNRSFRFVDwsptgfkigvspmppYYVPGGDLAPTNRACVAISNNTNIRIAWC 390 fruit fly
19074542 307 KYMACCLLFRGDVNPKEANNA-TANVKAKRTNQFVEwcptgfkvginsrkpTVLDGEAMAEVSRAVCALSNTTAISEAWK 385 Encephalitozoon cun...
13376181 318 KYMACCLLYRGDVVPKEVNAA-IAATKSRHSVQFVDwcptgfkvginnrppTVMPGGDLAKVHRSICMLSNTTAIVEAWA 396 human
13376539     --------------------------------------------------------------------------------     human
30154709 196 ----------------------------KHNIQCVDwcptgfkvgisyelpMVVPGGDLAKIQRAVCMLSNTTAFAETWA 247 human
29741994 272 AWDLAWATAAQPLAPLGGPPApGAFLDTSGAPHN-----------------QRVGSGGVEQIRRLHSGCPDSGPARQERA 334 human
20532817     --------------------------------------------------------------------------------     human
21450790     --------------------------------------------------------------------------------     human
21450790     --------------------------------------------------------------------------------     human
1FFX_A   390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEK 430 cow
7300328  391 RLVNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVH 431 fruit fly
19074542 386 RLNNKFDLMFSKRAFVHWYVGEGMEEGEFSEAREDLAMLED 426 Encephalitozoon cuniculi
13376181 397 RLDHKFDLMYAKRAFLHWYLREGMEEAEFLEAREDLAALER 437 human
13376539     -----------------------------------------     human
30154709 248 HLDHKF----------------------------------- 253 human
29741994 335 GAQPLIQLLTAPEQTVRR-PPCPRRTGEL------------ 362 human
20532817     -----------------------------------------     human
21450790     -----------------------------------------     human
21450790     -----------------------------------------     human
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