1FFX


Conserved Protein Domain Family
KOG1375

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KOG1375: KOG1375 
KOG1375, Beta tubulin [Cytoskeleton]
Statistics
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PSSM-Id: 229317
Aligned: 46 rows
Threshold Bit Score: -1
Created: 21-Jun-2003
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1FFX_B    37 HGD-SDLQLERINVYYNEAAGN-------KYVPRAILVDL-EPGTMDSVRSGPFGQIFRPDNfvfGQSGagn-------- 99  cow
17436591   6 YNHrSGGQEGAGETRMDTEGGAant--tmQYRIGHSWMQL-IPGSTGPSEKTYGLYRISKSLsgrMQGWsis-------- 74  human
29738166  23 FPLhVKVQVYESNCPFCHALMNas---gkCDSQESSGEKQ-TPASPSSIPASSREQ-MNSNGyvfVSGGitemlslsvtq 97  human
17473066     --------------------------------------------------------------------------------     human
17474379   1 ---------------------------------MKVNLLLlTLGSQDSKTESKMGREQRRRE---SKDK----------- 33  human
17486137     --------------------------------------------------------------------------------     human
29737499     --------------------------------------------------------------------------------     human
29732644   2 DTGsKNKVSLDICIHQNTAWNS-------------ERVML-EPGPTAKILWHCAVEETEPQPatgCASFpae-------- 59  human
29735888   1 MAClHEIAREILQCHNNNNKSm-------KCQLRKLVAD----GSLKTVTTG---------------------------- 41  human
8928405   37 YDEaISSFFRNVDTRVVGDGGSiskgkicSLKARAVLIDM-EEGVVNEILQGPLRDVFDTKQlitDISGsgn-------- 107 human
1FFX_B   100 -nwaKGHYTEGAELVDSvldvv------rkeseSCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE-EYPDRIMNTFSVVP 171 cow
17436591  75 -cpfLCHIGQGYIRSETsfllmek---snepteDNNTGPWGPNYHMFQNLVGHSSDSSLKKKSWFdLFCAPSVKVAGSFF 150 human
29738166  98 lsfrWGGFCQMKIIDESdyanfrcrnerdvnsyQRRIDKSEQKKHRYQKAKEEEDLEKSYYSLLNfKRLIKILMDPEVQD 177 human
17473066     --------------------------------------------------------------------------------     human
17474379  34 ----AVHYRAAVASRED----------------LVCCLVNGHLCKGYVEAVGLRRRVRGRMRERLmLWLFSISCQACGTE 93  human
17486137     --------------------------------------------------------------------------------     human
29737499     --------------------------------------------------------------------------------     human
29732644  60 --aqLLGYFSGAAVRQS----------------------GGQGSDALPWGRAAYGGRKQRQWRHS--------------- 100 human
29735888     --------------------------------------------------------------------------------     human
8928405  108 -nwaVGHKVFGSLYQDQilekf------rksaeHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLED-EFPEVYRFVTSIYP 179 human
1FFX_B   172 SPKvSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTygdlnhl----------------------- 228 cow
17436591 151 MYMvSDTVVEPYNTTFSVYQLIENAGETFCIDNEALYDICFRTLKLPTPNygdlnhl----------------------- 207 human
29738166 178 QQKvSKGIFQHADSNLQLECISVYCNETTGGKYVPHAELMDLEPSTGDSGsfvqilr----------------------- 234 human
17473066     --------------------------------------------------------------------------------     human
17474379  94 HDLpGASRLCPQSLGAAAGEARSPVPRQVLPLNPDMAAGAKAFDVKKSES------------------------------ 143 human
17486137     --------------------------------------------------------------------------------     human
29737499     --------------------------------------------------------------------------------     human
29732644 101 -EVlDGGSSEEYQGGKRHDQKSP--------------------------------------------------------- 122 human
29735888     --------------------------------------------------------------------------------     human
8928405  180 SGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGklgttvkpkslvtsssgalkkqhkkpfdam 258 human
1FFX_B   229 ---vsatmsGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDp 305 cow
17436591 208 ---vsatmsGVTTCLHFPGQLNADLGKLAINMVPFPHLHFFMPGFILLTSRGSQQYRALMVAELTQQTFDAKTMMTAGA- 283 human
29738166 235 ---ldnfifHQSGAGNNWANGHYAEGAELVDSVLDIVRREAESCDCLQDFQLTHSLGAGTGPKRGTPLISKIPEKYPDRi 311 human
17473066   1 -------------------------------------------------------------------------MGTVGK- 6   human
17474379 144 ---------LEDLNSRYGRAFSSLVTFAEFGMGKREGFFFQDKGKSSRVSNSQISMTDILESRGSPKSISSPPHQSAFT- 213 human
17486137   1 ---------------------------------------------------------------------------MSGKk 5   human
29737499     --------------------------------------------------------------------------------     human
29732644 123 ------------------------SL------VPPP----------------------LEVSKLTKQMFDAKNMLAACDp 150 human
29735888  42 -------------------QLNADLWKLTMNIIPFPYLHFFMPGFAPLTSQGSQQYQALTVAELTQQMFDTKNITAACDt 102 human
8928405  259 nnivanlllNLTSSARFEGSLNMDLNEISMNLVPFPQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADp 338 human
1FFX_B   306 rh--grYLTVAAVFRGr-mSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV-CDIPPRGLKMSATFIGNSTAIQELF--K 379 cow
17436591 284 ------------------------------------TPARLLPNGSCHFQG-PHVPEGGLKMSAAFTGNNMAIQELF--R 324 human
29738166 312 lnkfsvPLRKVATVFTdymSMKELDEQMLNVQNKNSSYFVE--------------------------------------- 352 human
17473066   7 ------------------------------------GDSEKL------FCE-DHRRQ-FVKIFEINRSNKIAFQVLF--R 40  human
17474379 214 ------QKTFDECRAGfqmAHSLDRGTGSGMGTFLISKMQEEYPDRIKNTFrEAGPSGSLCESNSNGQIKGSNPVLRanN 287 human
17486137   6 ct--geQDSKG---SWgcmAMEEADEQMLSVQNKYSSYFADWIPHSVKIAV-CDILPPRLKMPTTFTGNNITIQELF--R 77  human
29737499   1 ----------------------------------MDSRMASPERDHLALHV-CTCLPSHARFLFPFMLKEACLKSNQ--D 43  human
29732644 151 ch--gcYLMAAPI-VGgcmSMREVDEQTYNIQNKYSSYFAHWIPHNVERAA-CDIPPLELKMSVTFISNNTAIQELFrfR 226 human
29735888 103 sphygcYLTVPAIFRGh-mSTWEVDEQMLDVQNKNSCYFAYWLPNHVKTAV-CDIPPQGLKMSDTFISNNTASQELF--R 178 human
8928405  339 kh--slYLACALMVRG---NVQISDLRRNIERLKPSLQFVSWNQEGWKTSL-CSVPPVGHSHSLLALANNTCVKPTF--M 410 human
1FFX_B   380 RISEQFT-AMFRRKAFLHWYTGE--GMDEMEFTEAESNMNDLVSEYQQY-QDATADEQGEFEEEGEEDE 444 cow
17436591 325 HISKQFT-AVFRHKAFLPWCMGE--DMDEMEFTEAESNRNNLMFEYQQYq-----EEGEFEEWAQEEVA 385 human
29738166     ---------------------------------------------------------------------     human
17473066  41 CILEQFT-AMFMCKAFLHWYVGW--GMDEMELTEAESNVKDLMSESQQYqDAMGKQEGEFGEWAEEEVA 106 human
17474379 288 PGFSPSTkAYLGRSARATRKEKEkgAKALYEFEEKTRKTQEEIVK------------------------ 332 human
17486137  78 CISEQFT-AMFRCKAFLNPYVKQy-GMFEVPVEVRNSLFELNIHRYEMKyKPTNE-------------- 130 human
29737499  44 CLTQGLP-------ALVH----E--GMDEMEFTEAKCNMNDLVFAYQQY-HDATAEGKGAFKEWDEEEV 98  human
29732644 227 CILEQFT-AKFRCKAFLSWYSGK--GMHDVEFAEVESNMNNLVSEY----------------------- 269 human
29735888 179 PHLGAVHs---HVQVFLHCYMSE--GMDEMEFTEAKSSMNNLVSKYQQYyQHATAEEEVEFEECAEEEV 242 human
8928405  411 ELKERFMr-LYKKKAHLHHYLQVe-GMEESCFTEAVSSLSALIQEYDQLdATKNMPVQDLPRLSIAM-- 475 human
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