Conserved Protein Domain Family
KOG0981

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KOG0981: KOG0981 
KOG0981, DNA topoisomerase I [Replication, recombination and repair]
Statistics
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PSSM-Id: 228927
Aligned: 9 rows
Threshold Bit Score: -1
Created: 20-Jun-2003
Updated: 16-Jan-2013
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7293054  236 SYEAAAAGTNFNGNG--------NVAGANYKNGYEESIVDIKKEEESFNNLSQASSCDYSMSQFRADEPPF-VVKHEQSY 306  fruit fly
267146   121 DSEDDRPLSSILSGNkg-----pTSSRQVSSPQPEKKNNGDRPLDRASRIIKDESDDETPISSMFRKKIDSgMSGGNQLS 195  thale cress
15240493 130 DSEDDKPLSARLKLDskevtkqpSSSGRGSTQQAVQKSN-MRPQGLSDYTKKKVLDERAPMSSTVQTKTSVgTSSSKPVH 208  thale cress
17508321   1 MSVVSNHHSNGNGNS--------TVYDTNGNDEIKKEVKDEPMASDSEVPFGELMKRDKKEKKQKKRKAES-GSDEDDYK 71   Caenorhabditis ele...
7505887    1 MSVVSNHHSNGNGNS--------TVYDTNGNDEIKKEVKDEPMASDSEVPFGELMKRDKKEKKQKKRKAES-GSDEDDYK 71   Caenorhabditis ele...
12644118   6 LHNDSQIEADFRLND--------SHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEK----TKHKDGS 73   human
20140694     --------------------------------------------------------------------------------      human
13432252   1 -----------MSSS--------DSDSVSLSIRRRQRRGSSKRISMKESDEESDSSENHPLSESLNKKSKS-ESDEDDIP 60   fission yeast
135993     1 -----------MTIA--------DASKVNHELS-------------------SDDDDDVPLSQTLKKRKVA-SMNSASLQ 41   baker's yeast
7293054  307 AEEDSTMnyNDHDDDADEMNDDEEDVPLAMRKRKQEATDRPDGGMDNDDDDDIPLLARKKVKKEKIKKESKEKSK----- 381  fruit fly
267146   196 NDEKKPLvqKLHQNGSTVKNEVPNGKVLGKRPLEKNSSADQSSLKKAKISASPTSVKMKQDS-VKKEIDDKGRVLvspkm 274  thale cress
15240493 209 IEQKRPLvnNIDRNGLKPKTEGHSSQAPAKRPLEKGSSSNQSSVKRPKLSEPARPVKVEQGSHISATQDAKGKNLdaskp 288  thale cress
17508321  72 PEKRKSS--AKNGKKKDVGSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEESEGDVSEEDVKPQIHSDDELEEEDeaptt 149  Caenorhabditis ele...
7505887   72 PEKRKSS--AKNGKKKDVGSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEESEGDVSEEDVKPQ---------------- 133  Caenorhabditis ele...
12644118  74 SEKHKDKh-KDRDKEKRKEEKVRASGDAKIKKEKENGFSSPPQIKDEPEDDGYFVPPKEDIKPLKRPRDEDDADYk---- 148  human
20140694   1 ------------------------------------------------------------MRVVRLLR------------ 8    human
13432252  61 IRKRRAS----SKKNMSNSSSKKRAKVMGNGGLKNGKKTAVVKEEEDFNEIAKPSPKHKRVSKANGSKNGAKSA------ 130  fission yeast
135993    42 DEAEPYD----SDEAISKISKKKTKKIK----------------TEPVQSSSLPSPPAKKSATSKPKK------------ 89   baker's yeast
7293054  382 ----------------------------------KRVKEEPS------------D---DYGNVKPK--KKKMKKEPEPA- 409  fruit fly
267146   275 ------------------------------kakqLSTREDGTdddddddvpiskRfksDSSNSNTSsaKPKAVKLNSTSs 324  thale cress
15240493 289 -----------------------------lranqATVKEDNSdgddh--vpiasRmksDSSNNKSSsaKPSSSKMIASSs 337  thale cress
17508321 150 ddeeeqkrkekerrkkekrekkerkekkrlekenRKIKEEDDedsdd--eddekAkkkKRKSKGAEksKPSTSKKDAGG- 226  Caenorhabditis ele...
7505887  134 ----------------------------------------------------------KRKSKGAEksKPSTSKKDAGG- 154  Caenorhabditis ele...
12644118 149 ---------------------------------pKKIKTEDTk----------kEkkrKLEEEEDGklKKPKNKDKDKK- 184  human
20140694   9 ------------------------------------LRAALT----------------LLGEVP----RRPASRG----- 27   human
13432252 131 ------------------------------------VKKEESd----------tDdsvPLRAVSTVslTPYKSELPSGA- 163  fission yeast
135993    90 ------------------------------------IKKEDGd-------------------VKVKttKKEEQENEKKK- 113  baker's yeast
7293054  410 --------------VSPGKRQKAKAKVEEEEVWRWWEEEKRADGVKWSTLEHKGPVFAPRYERVPRNVRFYYDGKPLELS 475  fruit fly
267146   325 aakpkarnvvsprsRAMTKNTKKVTKDSKYSTSSKSSPSSGDGQKKWTTLVHNGVIFPPPYK--PHGIKILYKGKPVDLT 402  thale cress
15240493 338 --------------RTIAQKPNKWVKDSKYSKSSKSLPS-GDGQKKWKTLQHNGVIFPPPYK--RHGVKILFQGKPVDLT 400  thale cress
17508321 227 --------------KKEPPKKKVKKEEDIEDIWEWWKEEKKPAGVKWNSLQHCGPLFAPPYIPLPSHVHFKYGGEKMKLT 292  Caenorhabditis ele...
7505887  155 --------------KKEPPKKKVKKEEDIEDIWEWWKEEKKPAGVKWNSLQHCGPLFAPPYIPLPSHVHFKYGGEKMKLT 220  Caenorhabditis ele...
12644118 185 --------------VPEPDNKKKKPKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLS 250  human
20140694  28 --------------VP---GSRRTQKGSGAR----WEKEKHEDGVKWRQLEHKGPYFAPPYEPLPDGVRFFYEGRPVRLS 86   human
13432252 164 --------------STTQNRSPNDEEDEDED-YKWWTSENIDDTQKWTTLEHNGVIFAPPYEPLPKNVKLIYDGNPVNLP 228  fission yeast
135993   114 --------------REEEEEEDKKAKEEEEE-YKWWEKENEDDTIKWVTLKHNGVIFPPPYQPLPSHIKLYYDGKPVDLP 178  baker's yeast
7293054  476 EETEEAATFYAKMLNHDYCTKEVFNNNFFKDFRKSMTPREREI----IKDFRKCNFQEMFNYFQAESEKRKAASKEEKLI 551  fruit fly
267146   403 IEQEEVATMFAVMRETDYYTKPQFRENFWNDWRRLLG--KKHV----IQKLDDCDFTPIYEWHLEEKEKKKQMSTEEKKA 476  thale cress
15240493 401 PEQEEVATMFAVMRETEYYKKPKFRENFWNDWRKLLG--KNHM----IKSLDDCDFTPIYEWYMQEKETKKQMTAEEKRI 474  thale cress
17508321 293 LETEEIAQFYAGVLDHEYSTKEAFNKNFMKDWRKVMTVEERER----IHDLKKCDFRAIDAYQKEQREIRKAMTKEEKLK 368  Caenorhabditis ele...
7505887  221 LETEEIAQFYAGVLDHEYSTKEAFNKNFMKDWRKVMTVEERER----IHDLKKCDFRAIDAYQKEQREIRKAMTKEEKLK 296  Caenorhabditis ele...
12644118 251 PKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNEEKNI----ITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLK 326  human
20140694  87 VAAEEVATFYGRMLDHEYTTKEVFRKNFFNDWRKEMAVEEREV----IKSLDKCDFTEIHRYFVDKAAARKVLSREEKQK 162  human
13432252 229 PEAEEVAGFYAAMLETDHAKNPVFQDNFFRDFLKVCDECNFNHn---IKEFSKCDFTQMFHHFEQKREEKKSMPKEQKKA 305  fission yeast
135993   179 PQAEEVAGFFAALLESDHAKNPVFQKNFFNDFLQVLKESGGPLngieIKEFSRCDFTKMFDYFQLQKEQKKQLTSQEKKQ 258  baker's yeast
7293054  552 KKNENEALMKEFGFCMIDGHKEKIGNFRLEPPGLFRGRGEHPKMGMIKRRIQASDVSINCGKDSKVPS-PPPGSRWKEVR 630  fruit fly
267146   477 LKEEKMKQEEKYMWAVVDGVKEKIGNFRVEPPGLFRGRGEHPKMGKLKKRIHPCEITLNIGKGAPIPEcPIAGERWKEVK 556  thale cress
15240493 475 VKEEKLKQEEKYMWAVLDGVRERIGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKEAPIPEcPIPGERWKEVK 554  thale cress
17508321 369 IKEEKEAEVKIYGIAIIDGHRQKVANFRIEPPGVFRGRGGHPKMGLIKKRIMPEDVIINCGKDTEIPK-PPPGHKWKEVR 447  Caenorhabditis ele...
7505887  297 IKEEKEAEVKIYGIAIIDGHRQKVANFRIEPPGVFRGRGGHPKMGLIKKRIMPEDVIINCGKDTEIPK-PPPGHKWKEVR 375  Caenorhabditis ele...
12644118 327 IKEENEKLLKEYGFCIMDNHKERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDAKVPS-PPPGHKWKEVR 405  human
20140694 163 LKEEAEKLQQEFGYCILDGHQEKIGNFKIEPPGLFRGRGDHPKMGMLKRRITPEDVVINCSRDSKIPE-PPAGHQWKEVR 241  human
13432252 306 IKQKKDEEEEKYKWCILDGRKEKVGNFRIEPPGLFRGRGSHPKTGSLKRRVYPEQITINIGEGVPVPE-PLPGHQWAEVK 384  fission yeast
135993   259 IRLEREKFEEDYKFCELDGRREQVGNFKVEPPDLFRGRGAHPKTGKLKRRVNPEDIVLNLSKDAPVPP-APEGHKWGEIR 337  baker's yeast
7293054  631 HDNTVTWLASWIENVQG-QVKYIMLNPSSKLKGEKDHIKYETARRLDKVIDKIRATYRDEWKSKEMRVRQRAVALYFIDK 709  fruit fly
267146   557 HDNTVTWLAFWADPINPkEFKYVFLGAGSSLKGLSDKEKYEKARNLTDHIDNIRTTYTKNFTAKDVKMRQIAVATYLIDK 636  thale cress
15240493 555 HDNTVTWLAFWSDPINPkEFKYVFLAASSSLKGQSDKEKYEKARKLHNHIGSIRAAYTKDFNNKDVTKRQIAVATYLIDK 634  thale cress
17508321 448 HDNTVTWLCSWTESVLG-QNKYIMLNPSSKIKGEKDFEKYETARRLKKKIGGIRERYTDDFKSKEMRVRQRATALYFIDK 526  Caenorhabditis ele...
7505887  376 HDNTVTWLCSWTESVLG-QNKYIMLNPSSKIKGEKDFEKYETARRLKKKIGGIRERYTDDFKSKEMRVRQRATALYFIDK 454  Caenorhabditis ele...
12644118 406 HDNKVTWLVSWTENIQG-SIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDK 484  human
20140694 242 SDNTVTWLAAWTESVQN-SIKYIMLNPCSKLKGETAWQKFETARRLRGFVDEIRSQYRADWKSREMKTRQRAVALYFIDK 320  human
13432252 385 HDNTVTWLATWHENINN-NVKYVFLAAGSSLKGQSDLKKYEKSRKLKDYIDDIRKGYRKDLKSELTVERQRGTAMYLIDV 463  fission yeast
135993   338 HDNTVQWLAMWRENIFN-SFKYVRLAANSSLKGQSDYKKFEKARQLKSYIDAIRRDYTRNLKSKVMLERQKAVAIYLIDV 416  baker's yeast
7293054  710 LALRAGNEKDE-DQADTVGCCSLRVEHVQLHKELNG-------KENVVVFDFPGKDSIRYYNEVEVEKRVFKNLELFMEH 781  fruit fly
267146   637 LALRAGNEKDD-DEADTVGCCTLKVGNVECIPPNKI------------KFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAG 703  thale cress
15240493 635 LALRAGNEKDD-DEADTVGCCTLKVGNVECIPPNKL------------KFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAG 701  thale cress
17508321 527 LALRAGNEKDVdEAADTVGCCSLRVEHIKLFDSAKLneddkkeKEFVVEFDFLGKDSIRYFNRVSVEKRVYKNLKIFMEG 606  Caenorhabditis ele...
7505887  455 LALRAGNEKDVdEAADTVGCCSLRVEHIKLFDSAKLneddkkeKEFVVEFDFLGKDSIRYFNRVSVEKRVYKNLKIFMEG 534  Caenorhabditis ele...
12644118 485 LALRAGNEKEEgETADTVGCCSLRVEHINLHPELDG-------QEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMEN 557  human
20140694 321 LALRAGNEKEDgEAADTVGCCSLRVEHVQLHPEADG-------CQHVVEFDFLGKDCIRYYNRVPVEKPVYKNLQLFMEN 393  human
13432252 464 FALRAGNEKGE-DEADTVGCCSLRYEHVTLKPPRTV------------VFDFLGKDSIRYYNEVEVDPQVFKNLKIFKRP 530  fission yeast
135993   417 FALRAGGEKSE-DEADTVGCCSLRYEHVTLKPPNTV------------IFDFLGKDSIRFYQEVEVDKQVFKNLTIFKRP 483  baker's yeast
7293054  782 -KKEGDDLFDRLNTQVLNEHLKELMEGLTAKVFRTYNASKTLQSQLDLLTDPSATVPEKLLAYNRANRAVAILCNHQRSV 860  fruit fly
267146   704 -KSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLDEMLSQETK-DGDVTQKIVVYQKANKEVAIICNHQRTV 781  thale cress
15240493 702 -KSKTDDLFDELDTSKLNTHLKELMAGLTAKVFRTYNASITLDLMLSKETR-DGDVPEKVVVYQQANKEVAIICNHQRTV 779  thale cress
17508321 607 -KAPSDDLFDRLDTATLNDHLRSLMDGLTVKVFRTYNASITLQEQLIKLTNPKDNVAAKILSYNRANRQVAILCNHQRAV 685  Caenorhabditis ele...
7505887  535 -KAPSDDLFDRLDTATLNDHLRSLMDGLTVKVFRTYNASITLQEQLIKLTNPKDNVAAKILSYNRANRQVAILCNHQRAV 613  Caenorhabditis ele...
12644118 558 -KQPEDDLFDRLNTGILNKHLQDLMEGLTAKVFRTYNASITLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQRAP 636  human
20140694 394 -KDPRDDLFDRLTTTSLNKHLQELMDGLTAKVFRTYNASITLQEQLRALTRAEDSIAAKILSYNRANRVVAILCNHQRAT 472  human
13432252 531 pKKEGDLIFDRLSTNSLNKYLTSLMDGLSAKVFRTYNASYTMAEELKKMPK-NLTLADKILFYNRANRTVAILCNHQRSV 609  fission yeast
135993   484 pKQPGHQLFDRLDPSILNKYLQNYMPGLTAKVFRTYNASKTMQDQLDLIPN-KGSVAEKILKYNAANRTVAILCNHQRTV 562  baker's yeast
7293054  861 PKSHEKSMENLKEKIKAKREA----------------------------------------------------------- 881  fruit fly
267146   782 SKTHGAQIEKLTARIEELKEV----------------------------------------------------------- 802  thale cress
15240493 780 SKSHGAQVEKLAVKIEELREQ----------------------------------------------------------- 800  thale cress
17508321 686 SKGFDESMQKLEQKIKDKKKE----------------------------------------------------------- 706  Caenorhabditis ele...
7505887  614 SKGFDESMQKLEQKIKDKKKE----------------------------------------------------------- 634  Caenorhabditis ele...
12644118 637 PKTFEKSMMNLQTKIDAKKEQ----------------------------------------------------------- 657  human
20140694 473 PSTFEKSMQNLQTKIQAKKEQ----------------------------------------------------------- 493  human
13432252 610 TKNHDVQMERFAERIKALQYQrmrlrkmmlnlepklakskpellakeegitdswivkhhetlyelekekikkkfdrenek 689  fission yeast
135993   563 TKGHAQTVEKANNRIQELEWQkirckrailqldkdllkkepkyfeeiddltkede-atihkriidreiekyqrkfvrend 641  baker's yeast
7293054  882 ---------IEKCESEYHSR-----------D---------------EKKGKQLERLRDQLKKLELQETDRDENKTIALG 926  fruit fly
267146   803 ---------LKELKTNLDRAkkgkpplegsdGkkir-------slepNAWEKKIAQQSAKIEKMERDMHTKEDLKTVALG 866  thale cress
15240493 801 ---------IKELNIDLDRAkkgrtplmgsdGkrkr-------nltpEALEKKIMQTQGKIEKMERDMQTKEDMKTVALG 864  thale cress
17508321 707 ---------VKEAEAALKSArga----------------------ekEKAQKKYDRLKEQLKKLKISRTDKDENKQIALG 755  Caenorhabditis ele...
7505887  635 ---------VKEAEAALKSArga----------------------ekEKAQKKYDRLKEQLKKLKISRTDKDENKQIALG 683  Caenorhabditis ele...
12644118 658 ---------LADARRDLKSAkadakvmkdakTkk-----------vvESKKKAVQRLEEQLMKLEVQATDREENKQIALG 717  human
20140694 494 ---------VAEARAELRRAraehkaqgdgkSrs-----------vlEKKRRLLEKLQEQLAQLSVQATDKEENKQVALG 553  human
13432252 690 laaedpksvLPESELEVRLKaadelkkaldaElkskkvd--pgrssmEQLEKRLNKLNERINVMRTQMIDKDENKTTALG 767  fission yeast
135993   642 krkfekeelLPESQLKEWLEkvdekkqefekElktgevelksswnsvEKIKAQVEKLEQRIQTSSIQLKDKEENSQVSLG 721  baker's yeast
7293054  927 TSKLNYLDPRISVAWCKKHDVPIEKIFNKTQRTKFLWAVHMA---DENYRF 974  fruit fly
267146   867 TSKINYLDPRITVAWCKRHEVPIEKIFTKSLLEKFAWAMDVE----PEYRF 913  thale cress
15240493 865 TSKINYMDPRITVAWCKRHDVPIEKIFNKSLLAKFAWAMDVD----PEFRF 911  thale cress
17508321 756 TSKLNYIDPRITVAWCKKFEVPLEKVFTKTHREKFRWAIDMTnssDEEYVF 806  Caenorhabditis elegans
7505887  684 TSKLNYIDPRITVAWCKKFEVPLEKVFTKTHREKFRWAIDMTnssDEEYVF 734  Caenorhabditis elegans
12644118 718 TSKLNYLDPRITVAWCKKWGVPIEKIYNKTQREKFAWAIDMA---DEDYEF 765  human
20140694 554 TSKLNYLDPRISIAWCKRFRVPVEKIYSKTQRERFAWALAMA---GEDFEF 601  human
13432252 768 TSKINYIDPRLTYSFSKREDVPIEKLFSKTIRDKFNWAADTP----PDWKW 814  fission yeast
135993   722 TSKINYIDPRLSVVFCKKYDVPIEKIFTKTLREKFKWAIESVd---ENWRF 769  baker's yeast
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