1F60


Conserved Protein Domain Family
KOG0052

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KOG0052: KOG0052 
KOG0052, Translation elongation factor EF-1 alpha/Tu [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 228003
Aligned: 31 rows
Threshold Bit Score: -1
Created: 20-Jun-2003
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1F60_A     1 MGKEKSHINVVVIG------------------------HVDSGKSTTTGhliYKC------------------------- 31  baker's yeast
7302084    1 MGKEKIHINIVVIG------------------------HVDSGKSTTTGhliYKC------------------------- 31  fruit fly
7303554    1 MGKEKIHINIVVIG------------------------HVDSGKSTTTGhliYKC------------------------- 31  fruit fly
19074188  40 EDDSKPRLNACFIG------------------------HVDSGKSTTVG---MLSyq----------------------- 69  Encephalitozoon cun...
30149139     --------------------------------------------------------------------------------     human
17477080     --------------------------------------------------------------------------------     human
20539466     --------------------------------------------------------------------------------     human
22043347     --------------------------------------------------------------------------------     human
22064535   1 MAMQVERRSIPLDS------------------------EWHILCTECWLtsiG--------------------------- 29  human
30157651  43 QDPGTPRPKDSILLraisrglsppegqlkpaarirshlHAKCSSETERVgcrDFKphnrhvivlylliqsetcfivlpgg 122 human
1F60_A    32 --GGI----------------DKRTIEK---FEKEAA----------------------ELGKGSFKYA-WVLDKLKAER 67  baker's yeast
7302084   32 --GGI----------------DKRTIEK---FEKEAQ----------------------EMGKGSFKYA-WVLDKLKAER 67  fruit fly
7303554   32 --GGI----------------DKRTIEK---FEKEAQ----------------------EMGKGSFKYA-WVLDKLKAER 67  fruit fly
19074188  70 -lGAV----------------DKREMEK---YEKEAA----------------------LNNKETFYLA-YLTDKTDAER 106 Encephalitozoon cun...
30149139   1 -----------------------------------------------------------------------MSEKSFLGM 9   human
17477080   1 -------------------------------------------------------------------------------M 1   human
20539466     --------------------------------------------------------------------------------     human
22043347     --------------------------------------------------------------------------------     human
22064535  30 ----L----------------SGLNAST---ACKMSA----------------------TQAPGFVIASkGRTLNCHYIP 64  human
30157651 123 rgGALihadnswnfdrlpsteDSSYSSKptaMSKEKAfiniiiighvdsgkstttgpltNVGEGSFKYA-WVLDKLRAER 201 human
1F60_A    68 ERG-IT---IDIALWKFETPKYQVTVIDAPGHRDFIKNMITG----------TSQADCAILIIAG----GVGEFEAGISK 129 baker's yeast
7302084   68 ERG-IT---IDIALWKFETSKYYVTIIDAPGHRDFIKNMITG----------TSQADCAVLIVAA----GTGEFEAGISK 129 fruit fly
7303554   68 ERG-IT---IDIALWKFETAKYYVTIIDAPGHRDFIKNMITG----------TSQADCAVLIVAA----GTGEFEAGISK 129 fruit fly
19074188 107 KRGi----tITTTLVNLPTEKFNINILDCPGHKDFVKNMVTG----------ASQADVAVVIVPA------SGFESCVGV 166 Encephalitozoon cun...
30149139  10 GVLpEHryhENHSKKPKWERKNILVNIVIIGHIDSGKSTTTGhliskcggvdKRMADCAVLIVAAg----VGEFEAGVSK 85  human
17477080   2 DLLlEHkchEKHGLKAKRGKEKTPTNIDVIGHLGSGKSTTTGhliy---rcggMVAGCAVLIVAAg----IGEFEASISK 74  human
20539466     --------------------------------------------------------------------------------     human
22043347   1 ---mNVvssLVSLLWKFETSKYYVTIIDAPGHRDVIKNMITgt----------sQADRAVLIVAAg----VGEFEAGISK 63  human
22064535  65 NLEdIRkedIESEALLGSIHLGMMLVSDVTLSTVSKLESTGV----------IIYSNLGQSTTAGhliyICGGTDKRNIE 134 human
30157651 202 ERRi----tIDISLWKFKTSTYYSIIIDAPGHRDFIMTMIRG----------TSQADCAVLFVAG------GWAEAGIFK 261 human
1F60_A   130 DGQTREHALLAFTLGVRQLIVAVNKMDSVK--WDESRFQEI-VKETSNFIKKVGYNPKTVpfvpisgwngdnmieattna 206 baker's yeast
7302084  130 NGQTREHALLAFTLGVKQLIVGVNKMDSTEppYSEARYEEI-KKEVSSYIKKIGYNPASV-------------------- 188 fruit fly
7303554  130 NGQTREHALLAFTLGVKQLIVGVNKMDSSEppYSEARYEEI-KKEVSSYIKKIGYNPAAV-------------------- 188 fruit fly
19074188 167 GGMLKTHIMISGILGCEKLIVCVNKMDEIPenKRMEKFNEVsAEMLRIVKRSHKDKNPIIipisaf-------------- 232 Encephalitozoon cun...
30149139  86 NEQTHEYALLTYTLGVKQLIVGV-KMDSTEppYSQKRHKEV-IKKISTHIKKIDYNPYplniafvpis------------ 151 human
17477080  75 NGQIQEHALLAYTLGVKQQILGVSKIDSTEplYSQKRYKEI-VKEISTFLKKIGYNldtvafvsis-------------- 139 human
20539466   1 -------------------------MDSTEspYSQKRHEGI-IKEVSMYITKIGYNPD---------------------- 32  human
22043347  64 NGQTREHALLAYTLGVKQPIVGVNKMVTLShpIARRDTRKS-LRKSALH------------------------------- 111 human
22064535 135 KAEKETAEMEKGSFK----YAWVLDKLKAEreHTASTSSNC-KPLCCLSKMSLKLAIS---------------------- 187 human
30157651 262 NPQTHELALLANWRDVTQLIVIFNEIDSTEpaYSGSRLQVItKEGQPGWR--RADHTPDSppl----------------- 322 human
1F60_A   207 pwykgweketkagvvkgktlleaidaieqpsrptdkplrlpLQDVYKIGGIGtvp--vgrVETGVIKPGMVVTFAPAGV- 283 baker's yeast
7302084  189 ------------------------------------------------------------AFVPISGWHGDNMLEPSEK- 207 fruit fly
7303554  189 ------------------------------------------------------------AFVPISGWHGDNMLEPSTN- 207 fruit fly
19074188 233 -----------------------------------kginltKKGEKFEWFKGwkekegssVIYTLEEALNYQDVPERHNd 277 Encephalitozoon cun...
30149139 152 -------------------------------vwncdsmlvpRVHMPGLKGWKvtrndgndSGTMLPEALNYILPPAHPTd 200 human
17477080 140 -------------------------------gwnggsmlkpSAHRPWFKGWKvvrkdgnaSGTTLPEALDCVLSLTCPTv 188 human
20539466  33 -----------------------------------------TVACAPLSGWN--------------------------Vd 45  human
22043347     --------------------------------------------------------------------------------     human
22064535 188 -----------------------------------------VLSLIVVTFAS--------------------------Vn 200 human
30157651 323 --------------------------------------dipKMPWFKCWKVEwkeg--namgVTLLEALNSILPTTRRVd 362 human
1F60_A   284 -TTEVKSVEMHHEQLE--------QGVPGDNVGFNVKNVSVKEIR----RGN-------VCGDAKND----------PPK 333 baker's yeast
7302084  208 -MPWFKGWSVERKEGK--------AEGKCLIDALDAILPPQRPTD----KP----------------------------- 245 fruit fly
7303554  208 -MPWFKGWKVERKEGN--------ADGKTLIDALDAILPPARPTD----KA----------------------------- 245 fruit fly
19074188 278 kPLRMPITKVCSIAG-----------VGKIFTGRVEYGTITPNLKitiqPAG-------VVGETRSVeihnkprsmiPCG 339 Encephalitozoon cun...
30149139 201 kSLRLPLQDVYNIGd--------iG---TVSMGWAETGVLKPGTVvtfaPVNvttegksVEMHHEALsealpgdnvgFDV 269 human
17477080 189 rPLHLPLQDVYRLGGTdtifvgrvGGTDTIFVGRAKPGFLKPGMVvtfaPVNiat--kdVLKCTMKL------------- 253 human
20539466  46 vTTEVKSVEMHHEASSe--------aLPGDNVGLNAKNISVKNVC----HGN-------VAGDSKND----------PSV 96  human
22043347     --------------------------------------------------------------------------------     human
22064535 201 vKTEVKSIEMHHEAPSe--------dLPGDNVGFNVKNMPVEDVH----CGN-------VAGDSKND----------PPV 251 human
30157651 363 nPLRLPLQDVYKMGGDpgl--sgaEGIGSVPVGRVEGGFFKFGIVvtfaPSN-------VTTKVKSVemhhevlaeaLWL 433 human
1F60_A   334 GCASFN---------------------------------ATVIVLNHPGQISAGYSPVLDCHTAHIACRFDELLEKNDRR 380 baker's yeast
7302084  246 ---------------------------------------------LRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVNF 280 fruit fly
7303554  246 ---------------------------------------------LRLPLQDVYKIGGIGTVPVGRVETGVLKPGTVVVF 280 fruit fly
19074188 340 ENCGVAlkggvigeidkvdaghvisandenkavaypgakIRTIVVGRPKGLSPGYTPQINFGNCHSPGRIAKILSKV--V 417 Encephalitozoon cun...
30149139 270 KNVSVKdvrcgnvagdsi----------ndppveavdftAQVIILNHPGHISTDCGPVLNCQTAHIACKFAELKKKTDCC 339 human
17477080     --------------------------------------------------------------------------------     human
20539466  97 GATSFT---------------------------------GQVIILHHPDQINGGYAAILDCHTVHIACSFAELRGKIDHH 143 human
22043347     --------------------------------------------------------------------------------     human
22064535 252 ETAGLT---------------------------------AQVIILNQPGQISAHCESVLDCHTTQIACKVAELKEKIDCN 298 human
30157651 434 TM------------------------------------------------------------------------------ 435 human
1F60_A   381 S----------GKKLEDHPKFLKSGDAALVKFVPSKPMCVEAFSEYPPLGRFAVRDMRQTVAVGVIKSVDKTEK-AAKVT 449 baker's yeast
7302084  281 A----------PVNLVTEVKSVEMHHEALTEAMPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQViVLNHP 350 fruit fly
7303554  281 A----------PANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKANPPKGAADFTAQViVLNHP 350 fruit fly
19074188 418 G----------KEVHENPENVANGENFTG-IVVFQKPLVIDKMERFQNLAKFALMDSNGVVGIGNVMEPLTRDQlLKDYG 486 Encephalitozoon cun...
30149139 340 SvllpfvgfikAVDKKGAGAGKVTKPAQKarkak---------------------------------------------- 373 human
17477080     --------------------------------------------------------------------------------     human
20539466 144 S----------DTVEDGGSPQGGAPESSSSSSRPSSSATRQSPPSAVPSPGPPSRQLSEEGAQDGEEVQIYIINtAGQED 213 human
22043347     --------------------------------------------------------------------------------     human
22064535 299 S----------GKKLEDDPKLLNADDAAILYMVPGKPISGQGKVIKGVIKAVDKKARYCQGAG-------KVCKsAQKAQ 361 human
30157651     --------------------------------------------------------------------------------     human
1F60_A   450 KAAQKAAKK 458 baker's yeast
7302084  351 GQIANGYTP 359 fruit fly
7303554  351 GQIANGYTP 359 fruit fly
19074188 487 IDLNEDPKA 495 Encephalitozoon cuniculi
30149139     ---------     human
17477080     ---------     human
20539466 214 YTAIKDNYF 222 human
22043347     ---------     human
22064535 362 KAKQMLSLI 370 human
30157651     ---------     human
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