Conserved Protein Domain Family
PsbA

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COG5716: PsbA 
Photosystem II reaction center D1, PsbA [Energy production and conversion]
Photosystem II reaction center D1, PsbA is part of the Pathway/BioSystem: Photosystem II
Statistics
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PSSM-Id: 444426
Aligned: 24 rows
Threshold Bit Score: 331.678
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015224801   1 MTNfIQ-QPTRElrtGQLW--EKFCNWVTSTNNRIYIGWFGLLMIPTLLTASIVFAIAFVAAPPVDLLGIREPVIGSLLD 77 
WP_002720420  23 EDVnLA--NRSGvgpFSTLlgWFGNAQLGP----IYLGSLGVLSLFSGLMWFFTIGIWFWYQAGWN----------PAVF 86 
WP_013323757   1 MSS-VI-QGRREldiGDSW--ELFCQWITSTNNRIYVGWFGILMIPVLFAAAACFVIAFVAAPPVDMEGIREPIFGSLLS 76 
WP_013984577  25 DAGnNMhEERVGkpfFNSLagLIGNGQIGP----YYWGWTSMVAFGTGLAWFVIVGFNMLAQVGWS----------IPQF 90 
WP_013417914  23 LYRdQY--GRTGkpfHVYLlgLIGDAQIGP----IYLGLTGVASIIFGFIAIEIIGLNMAASVDWS----------PAQF 86 
WP_015142843   1 MTS-VI-QRRREldiGRIW--EGFCNWVTSTDNRIYIGWFGVLMIPTLIAASVCFIIAFIVAPPVDMDGIREPIIGSLLG 76 
WP_025311353  25 LKEnVLgGGRTDgttFSKLlgWVGNAQLGP----IYLGWAGLTSLATGFTWFFIVGLNMLAQVGWS----------IPEF 90 
WP_058933991  23 LGRdEY--QRSGgstHVHWlgRLGDAQLGP----IYLGWLGLCSLICGFIAIEIIGLNMLASVNWN----------PIQF 86 
WP_042458398  23 NENnMM--EERAgmgHFSIlgWLGNAQLGP----IYLGYTGVVSLIAGCFAFLIIGLNMLAQVDWS----------LVQL 86 
WP_071479741  23 EGVeLG--NRTKsagFSSLlgWFGNAQLGP----IYLGTMGVISLAAGTIWFVMVGMWFWDQAGYN----------PAVF 86 
WP_015224801  78 GNNLITAGVVPTSAAIGLHF-YPLWEASSVSEWLYNGGPYQLIIFHFLIGVWAYLGRLWELSYRLGMRPWISVAFSAPVA 156
WP_002720420  87 LRDLFFFSLEPPAPEYGLSFaAP----------LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIW 156
WP_013323757  77 GNNLISAAVIPSSAAIGLHF-YPIWDAASIDEWLYNGGPYQLIILHFLIGIWCYLGRLWELSYRLGMRPWIAVAYSAPVA 155
WP_013984577  91 IRQLFWLALEPPSPEYGLTM-PP----------LNDGGWYIIASFFLLVSVMTWLLRAYLLAEQHKMGKHIFWGFAAAVW 159
WP_013417914  87 VKQLPWLALEPPAPENGLKI-PS----------LNNGGWWLWAGFFMTASVLLWWARTYLRARQLGMGTHIAWAFASAIF 155
WP_015142843  77 GNNLITAAVVPTSAAIGLHF-YPIWDAASMDEWLYNGGPYQLIILHFLIGIWCYLGRLWELSYRLGMRPWISVAFSAPAA 155
WP_025311353  91 LRQLFWLALEPPGPEWGLRF-PP----------LNDGGWYIIASFFLLVSVMAWWVRTYLLATQHKMGKHIAWAFLAAIW 159
WP_058933991  87 VRQLPWLALEPPPPANGLHL-PP----------LNQGGWWLLAGLFLTTSILLWWVRMYRRARKLGMGTHVAWAFAAAIW 155
WP_042458398  87 LRQGFWLALEPPSPEYGLRI-PP----------LKEGGWYMVASFFLLISVWAWWARTYMLAVEHKMGKHIAWAFLSAIW 155
WP_071479741  87 LRDLFWLSLDPPAPEYGLSM-PP----------MREGGYYLIASFFLLISVMAWWVRTYLRAEALGMGKHVAWAFASAIW 155
WP_015224801 157 AATAVFLIYPIGQGSFSEGMPLGISGTFNFMFNFQAEH-NILMHPFHMLAVAGVFGGAFLSSLHGSLVTSSIIRETTELE 235
WP_002720420 157 LWMVLGFIRPILMGSWSEAVPYGIFSHLDWTNNFSLVHgNLFYNPFHGLSIAFLYGSALLFAMHGATILAVSR------- 229
WP_013323757 156 AASAIFLVYPIGQGSFSEGMPLGISGTFHFMLAFQADH-NILMHPLHMLGVAGIFGGALLSSVHGSLVSSSLIKETTEQE 234
WP_013984577 160 LFLVLGLFRPILMGSWSEAVPYGIFPHLDWTTAFSIRYgNLYYNPFHCLSIVFLYGSVLLFCMHGGTILAVTR------- 232
WP_013417914 156 LMLSCGLFRPVLMGTWGEAVPFGIFPHLDWTATFSIRYgNLYYNPFHMLSIAFLYGSTLLFAMHGATILAVSR------- 228
WP_015142843 156 AATAVFLVYPIGQGAFAEGMPLGISGTFHFMLAFQANH-NILMHPLHMLGVAGIFGGALLAATHGSLVTSSLIRETTNEE 234
WP_025311353 160 LFLVLGLFRPILMGSWSEAVPYGIFPHLDWTTAFSIRYgNLYYNPFHALSIVFLYGSVLLFAMHGGTIMAVTR------- 232
WP_058933991 156 LYLVLGIIRPVLMGSFGEAVPFGIFPHLDWTAAFSLRYgNLFYNPFHMLSIVFLYGSTLLFAMHGATILAVSR------- 228
WP_042458398 156 LFMVLGFFRPILMGSWSEMVPYGIFPHLDWTTAFSIRYgNLYYNPFHALSIAFLYGSALLFAMHGGTILAVTR------- 228
WP_071479741 156 LFLVLGLFRPILMGSWSEAVPYGIFTHLDWTNLFSLRYgNLFYNPFHALSIAFLYGSALLFAMHGATILAVSR------- 228
WP_015224801 236 --------SQNSGYKFGQQEATYNLLAGHeGYLGRVLFRGSGFHNS--RSIHFFIAAWPVIGIWFAALAVGTMAFNLNGF 305
WP_002720420 230 --------------FGGERELEQIADRGTaAERAALFWRWTMGFNAtmEGIHRWAIWMAVLVTLTGGIGILLSGTV---- 291
WP_013323757 235 cgtssapqSINQGYRFGQQETTYNLVAGHqGYLGRLLFPGLGLRNS--RSIHFLIAAVPVVGIWFATLAVGVMAFNLNGF 312
WP_013984577 233 --------------YGGDRELEQIYDRGTaTERAALFWRWTMGFNAtmEGIHRWAWWFAVLTPITGGIGILLTGTV---- 294
WP_013417914 229 --------------FGGEREIEQSTDRGTaLERAGLFWRWTMGFNAsmESIHRWAWWFAVLCPITGGIGILLTGTV---- 290
WP_015142843 235 --------SINAGYKFGQKEVTYNLLAGHvGYLGRLLIPSLAMRNH--RAIHFLLAALPTIGIWCAALGISTMSFNLNGF 304
WP_025311353 233 --------------YGGDRELEQIVDRGTaSERAALFWRWTMGFNAtmEGIHRWAWWFAVLTPITGGIGILLTGTV---- 294
WP_058933991 229 --------------FGGEREIEQITDRGTaSERAALFWRWTMGFNAtmESIHRWAWWFAVLCPLTGGIGILLTGTV---- 290
WP_042458398 229 --------------FGGDRELEQIYDRGTaSERAALFWRWTMGFNAtmEGIHRWAWWFAVLTPLTGGIGILLTGTV---- 290
WP_071479741 229 --------------FGGDRELEQIVDRGTaSERAALFWRWTMGFNAtmEGIHRWAWWFAVLVTLTGGIGILLTGTV---- 290
WP_015224801 306 NFNQ-SVLDSQGRVINTWADILNRANIGLEVTHE---MNAHNFPYDLAAGEPMPVA 357
WP_002720420 292 -VDNwYVWGQNHGMAPLN-------------------------------------- 308
WP_013323757 313 NFNQ-SVIDSQGHPIYTDADLLNRANLGLRAMHS---PNAHHFPLTLAGGEPVIVN 364
WP_013984577 295 -VDNwFIWAQEHHFAPMYDGSYGYEDYGSYEAFIgkeN------------------ 331
WP_013417914 291 -VDNwYLWGIKHGFVPVYPET---------------------LPVIVDPAL-LPGA 323
WP_015142843 305 NFNQ-SILDSHGHPIYTDADLINRANLGLRAMHA---PNTHHFPLVLAGGEAVSIS 356
WP_025311353 295 -VDNwFIWAQEHNFAPEYLGAYGYEAYGTYSDFGgiaPTGE--------------- 334
WP_058933991 291 -VDNwYLWGVKHGIAPMYPAV---------------------FPPVVDPSLVVPGG 324
WP_042458398 291 -VDNwYIWAQEHNFVTEYTQPYGVDAYVGQGG------------------------ 321
WP_071479741 291 -VDNwAVWAEERGFRPTYD------------------------------------- 308
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