Conserved Protein Domain Family
COG5624

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COG5624: COG5624 (this model, PSSM-Id:227911 is obsolete)
Transcription initiation factor TFIID, subunit TAF12 [Transcription]
Statistics
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PSSM-Id: 227911
Aligned: 3 rows
Threshold Bit Score: 532.731
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
19074702   1 MNFFEEgkrlkgifDDLVKQHKKSKRRIVDNKNVSREMLGAYEENRMKLMHFFEMHSRFIRPRKNSVGIFSVDDFVKAKT 80  Encephalitozoon cun...
19115201   1 MNGQHS--------SPGTPVQR-PSAGPVNQAQFSQQ----RTNQLTSLLHTMTMYQQLAQNVGLNTPQGQVYLLQAQTI 67  fission yeast
6320349    1 MSSNPE--------NSGVNANNNTGTGNADAITGAQQNMVLQPRQLQEMAAKFRTLLTEARNVGETTPRGKELMFQAAKI 72  baker's yeast
19074702  81 RES----AMFSEGGGLGAEGR-----------------AEILGP--RERPCHWGGMSDVGCGAVYGVNYREFPgMLHMQG 137 Encephalitozoon cun...
19115201  68 R---------RQLQGHAQSGQ-----------------LPN-----QQLLQQLQSNGALQQGTPEPSNTRPRP-QLNAQE 115 fission yeast
6320349   73 KQVydalTLNRRRQQAAQAYNntsnsnssnpasiptenVPNSSQqqQQQQQQTRNNSNKFSNMIKQVLTPEEN-QEYEKL 151 baker's yeast
19074702 138 RVSggrwGITEHGRFMwmgPSSMGYPSMGMQRSVGWDWRPVN--FRGQSRNANGFFGAWPYgMEVKSKDFGEGCGMyGIH 215 Encephalitozoon cun...
19115201 116 QTM----LLVRHRQLQ---TAQNYLTEMKEALGRIKNELSTN--ERLDTSAREALVKQESE-LTVKIAQFTAAISN-GIR 184 fission yeast
6320349  152 WQN----FQVRHTSIK---EKETYLKQNIDRLEQEINKQTDEgpKQQLQEKKIELLNDWKV-LKIEYTKLFNNYQN-SKK 222 baker's yeast
19074702 216 MNQGLRARgQEMMGLGIMAGGVYG--IHDGRSKRRLVDRYgvPgdevQFRTGGKRVLSPNIGFLHGMERYEASG--MPPP 291 Encephalitozoon cun...
19115201 185 SIQQLQNR-QASSANGNNTGTSTP--VNASTDTRKSTAST--P----QLQQTQAQANAPQQRIN--------------PE 241 fission yeast
6320349  223 TFYVECAR-HNPALHKFLQESTQQqrVQQQRVQQQQQQQQ--Q----QQQQQQQQQQQQQQRQGQNQRKISSSNstEIPS 295 baker's yeast
19074702 292 AEWAG---SNGLHVLPGRREEVLRPIFRCPSPESYRGEPSHLDYRNGMALNAQgRGRFPGTCSIYPENPGKRWCSTGYPQ 368 Encephalitozoon cun...
19115201 242 TS------S---------VPETPVGVSAANVSNESTELATSATQQSGLANNVE-KSQTPSYMSAN---HL-PKVDSKSPI 301 fission yeast
6320349  296 VTGPDalkSQQQQQNTITATNNPRGNVNTSQTEQSKAKVTNVNATASMLNNIS-SSKSAIFKQTEPAIPISENISTKTPA 374 baker's yeast
19074702 369 GLVHKGgkmswalvDRDMENTLCSAPDGGSASEGRDKGHLSCRDDLWRLDITPNLEEEQHGG-VS---EKEKEENEKTSP 444 Encephalitozoon cun...
19115201 302 PFSVPP--------SRATLTGGYASGSIGLSTPGLSRAPHYELDNGNRLLSKRKLHDLLQQI--D---SEEKIEPEVEEL 368 fission yeast
6320349  375 PVAYRS--------NRPTITGGSAMNASALNTPATTKLPPYEMDT-QRVMSKRKLRELVKTVgIDegdGETVIDGDVEEL 445 baker's yeast
19074702 445 AGSRSNGRDEPSNEFSCVgYEVDPDTKTIEdlVGDGNIDKEAKTFIYelCDGFVDHIIHMscalAYHRQKDTVEVCDVKL 524 Encephalitozoon cun...
19115201 369 LLEIADEFVESVTNFACR-LAKHRKSDTLD--VRDVQLHLERNWNIR--LPGFASDDIVK----SARKTGPTPSYQQKQN 439 fission yeast
6320349  446 LLDLADDFVTNVTAFSCR-LAKHRKSDNLE--ARDIQLHLERNWNIR--IPGYSADEIR-----STRKWNPSQNYNQKLQ 515 baker's yeast
19074702 525 ALKTEVGIELPSDDVDPKDTPSEE 548 Encephalitozoon cuniculi
19115201 440 AIGTAKSLNKD------------- 450 fission yeast
6320349  516 SITSDKVAAAKNNGNNVASLNTKK 539 baker's yeast
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