Conserved Protein Domain Family
COG5600

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COG5600: COG5600 
Transcription-associated recombination protein [DNA replication, recombination, and repair]
Statistics
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PSSM-Id: 227887
Aligned: 5 rows
Threshold Bit Score: 391.082
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6324500    1 MDMANQLLDELAHGNFSHLTLNLSQNGRE--IAILQKQLTG-FDDKQLETFVEQHPAMPN---DTRFKIMCTSFLNYARD 74  baker's yeast
19075095   1 ----------------------------------MGWVETTnSKIDAEDGEYISQLFGRN-----ADTLVGMKSSDLGRV 41  Encephalitozoon cun...
3183362    9 NVYFSTINSAVARSNSVLLAKNLSIPWGKtlTSVLNFDIPGtYSSDDVLKLTVERSISKNw--TDIVLLHLQVLLYLVRD 86  fission yeast
19113255   4 NDFLQTLSNAVGEKNSNTLEKCIILDPSEpsFQQLSKTLFLdRKGKNKLNGTIQKEFGRIrgwKELVTTYFEYVENAASS 83  fission yeast
1352896    1 ---------------MDVDIGCYFEEKRY--DDKLLDFIRYdVKTPKKTKYILQRPTATD-----EESVRLQRFYQLGVD 58  baker's yeast
6324500   75 VDP-WSaWSSSDLIFEFYQCLINCLINDNAPHIEMLIPVATR-ETEFIINLAGKLDSFHLQLHTRS---HQFLSHISSIL 149 baker's yeast
19075095  42 KYP-------FNALFEYQKALVAEKSYSS---AEVLVKNAVRmLGREKWASTVVKRAVYGLLELKS---QDNLGKISKLL 108 Encephalitozoon cun...
3183362   87 HDPaAAfKQQTELAQHLYREFSSGRCTGVHLPVLFIVCKDLRfLAINAHNAMLRRKQQLKVISVDEseeNEQLEATARLI 166 fission yeast
19113255  84 PD-----QRKWELLQNLYSNLTTCFSHIDGAWLCTIVKRVSKlYVKLSLQLDTSTPTLEDSFDGNGfiqRKYVSDASRNV 158 fission yeast
1352896   59 LKLkYS-KRRSLKKQGRIKNATEELLRLANEQLKLFNRIVEReTNWIIYPLWVMAKQLIRLANESSelnKDSIEECGRTI 137 baker's yeast
6324500  150 SRLFNSIKPPRGNAsstNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQP-KSMLAHFn------EYQLDQQIEY 222 baker's yeast
19075095 109 TDMHKKLVEEESP------AAAYVG-----NALLQIHLDMGRFKSAEDFLRASKE----PDTR----------CRDYHVF 163 Encephalitozoon cun...
3183362  167 NRAFTICINDRAP----LSTSRKWGAYYIMGLLFKLYLRLDCVHLTNNVLRAMKV-VELPDIS-------LFPKSHVVIF 234 fission yeast
19113255 159 LRTFNSILSDRQQN---INPSKKDAIFCIANLLCLLYFRLKQIRLCQ-TIQANVI-SSGADIS-------RATMAELVTF 226 fission yeast
1352896  138 HRSFTICLNDRNPR---LNENKKIGCYMFANLEFSIYHRLSNKDMIKNLVKVLESrVNARDIPplnkslaMEHKSQVVLY 214 baker's yeast
6324500  223 RYLLGRYYLLNSQVHN-AFVQFNEAFQSLLNLplt---nqaITRNGTRILNYMIPTGLILGKMVkw--gPLRP-FLSQET 295 baker's yeast
19075095 164 HYYRGIIKMHEEDFRE-AYLSLKKVFMYKRW--------------RKIVAPVYFISSLFVNKFP-------KDvYLERFG 221 Encephalitozoon cun...
3183362  235 HYYLGIVAFLNQNYKN-ASAELEIAFSLCHKG---------YNRNLELILSYWIPTRILVNHQL-----PTKN-LLSKFP 298 fission yeast
19113255 227 RYYLGRCHLYQRKIHQ-AKDHLLFSFLQCPD----------ECYHQKRLSLIYLTTCLLILGKS-----PTKG-LLEKYK 289 fission yeast
1352896  215 NYYLGQYYGCLENDHErGFFHLNEALLQCPMLyvestgkfvLQGQMEKIMILLVPLALLTKRLYphwdhPVIAgVITRSK 294 baker's yeast
6324500  296 --IDNWSVLYKHVRYGNIQGVSLWLRQNE--RHLCARQLLIVLLEKLPMVTYRNLIKtviKSWTTEWGQNK----LPYSL 367 baker's yeast
19075095 222 --CSYLSGLVSIVRGGLYEDIDDAISRTS--EKIADYNLCRTMAAHYPLVCFNNLVG---RIYRLHGCDSR------LDI 288 Encephalitozoon cun...
3183362  299 nlASVYIPLTRALKSGNLGEFGKCLQKNE--TLLAKTKIYLTLEG-TRDLCIRNLFR---KTWIICGKSTR----LPVSV 368 fission yeast
19113255 290 l-TAAFEPLIKALKSGDIKSFRLSLEDNSrrKWFIKRGIYLTLLDRCEIILWRNLFR---KVFLFTFEQSQktphVSGSY 365 fission yeast
1352896  295 rlSQVYPTLVRSVISGNLSLYEATAASHE--RFFLSQGLHVVITLLREVVFTRLVQRc--WQWGNDRKSIM-----PLKI 365 baker's yeast
6324500  368 IERVLQLSIGPTFedpgaqeitiyngiHSPKNVENVLVTLINLGLLRANCFPQLQLCVVKKTTMIQEIVPP 438 baker's yeast
19075095 289 QRIVEALPAID------------------FKEIICLLSTSIGLGRLKGYISISRRAVVFSRADPFPVLVK- 340 Encephalitozoon cuniculi
3183362  369 FQIALQVAGTD----------------LPKLHVEAILANMISKGYMRGYISRNFETVVLSAKDPFPKNVST 423 fission yeast
19113255 366 LLTAARLSTNDNS--------------YDMDDVECICVSLIDQGYIKGYIIHASSTLVLKKDPSFGFSVIE 422 fission yeast
1352896  366 LLATKQHDSSANEde-----------eEQLDALECRLASAIASGLLRAYLSHSNRCIVFSKKEPFPHSK-- 423 baker's yeast
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