6FJW,4C8Y,4ILL


Conserved Protein Domain Family
Cas6a

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COG5551: Cas6a 
CRISPR/Cas system endoribonuclease Cas6, RAMP superfamily [Defense mechanisms]
CRISPR/Cas system endoribonuclease Cas6, RAMP superfamily is part of the Pathway/BioSystem: CRISPR-Cas system
Statistics
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PSSM-Id: 444294
Aligned: 108 rows
Threshold Bit Score: 107.038
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6FJW_A         3 KLVFTFK-RIDHPAQDLAVK-FHGFLXEQL--------DSDYVD-YLHQQ-------QT-----------------NPYA 47 
WP_013451734  11 RLKF----KNRFTTKVYPAFvIRSVLGNELrklscilrGKECGDcPLKFQcaysyifETpikkdtef-llgrdrasHPFR 85 
WP_100919460  20 RFNFALRaLDDIALPDYPGSaWRGLLGHGLrrtacvtrQPTCAGcLLIHQcvyslifETppppahds--agftampHPFV 97 
WP_100919908  39 RLRFRLRaLDPIELPEYAGSaWRGLLGHGLrrtvcvtrQPTCAGcLLTHAccysllfETppppghds--agfsalpHPYV 116
WP_102041952  44 RYRYTFRmNQPLQLPQYAGSlLRGQFGAALrrascltgQPRCEPcPVRGHcpypaifEApapaqhal--qrfshipNPYV 121
WP_104936783   7 ALDFDCRfisPARLPAFKGStLRGAFGHALksvacalkRQDCAScLLAGNcayslifATekldas-----rlsarpHPYV 81 
WP_106683686  23 RLHLTVRaDAALHLPPYAGSmLRGAFGHALlala-plpHTDGQPcALAHHcpycqvfATpalpghsl--qkfsnmpQAYV 99 
WP_119334768  12 RYRLEFEvTKDLHLPAYAGStLRGAWGSALraiccmtrLPVCDNcPLLDTcpyaaifETrphqrrasflqnfthvpRPYV 91 
WP_119632443  14 VFRCHFEtTEPLRLPAYAGSaWRGALGHALkravcvvrGTSCPScLLYRScvfpyvfETppppdsek-mrryttapHPFA 92 
WP_120176694  12 RYKFVFavTSPIELPDYAGSaFRGAFGRALrktacmtrMSDCSTcPLRSTcaytsvfETpapaehal--qsfskvpNPYV 89 
6FJW_A        48 -------TKVIQGKENTQWVVHLLT--DDHEDKVFXTLLqIKEVSLN------DLPkLSVEKVEIQE------------- 99 
WP_013451734  86 ifsdtlpRKEF---EEIRLTLSLFGrgVDYFPYLFFALKmGGEKGLFk----eRIP-YEIKSIQEGDsvvyngeg----- 152
WP_100919460  98 ldldpqaPRRYHSGAALALGITLIGpaIGQLPYLIHALTaAGTQGLGw----eRGR-FALEAVQRETapgtalwetvydt 172
WP_100919908 117 ldidpraPRHHATGDHLDLGITLLGtaIDQAPYLIHALAnAGQLGIGr----dHGR-FAVAALHRESapgsdtwvqvy-- 189
WP_102041952 122 iepppfgTAYIPQGHPLTFNLVLIGraLEHLPLINRALQnAFAQGIGs----qRAR-GTLQQIDLQHpdpagpaqwrpiw 196
WP_104936783  82 lnppatdQLQYREGDSLSFNLVLLGpaTQFLPHVVCAVEaMGQKGIGsgttegAGR-FALRRVTMGEqpaqvlyteedrm 160
WP_106683686 100 iepplggEQRLRAGQEWGFSLVLIGkaLAHLPIVIQAWErALRCGLGv----qRSR-CTLLAVHAEQqptplwqa----- 169
WP_119334768  92 ieppqmgKRSYIPGERFSFHIVLVGraLEHLSLILWAYVkAFRRGVGsg---dGTA-ELLRAIHMGEtetivleap---- 163
WP_119632443  93 lrid-----prsDGSPYRLGLTLFGraDRHLPYFIHALDqAGKAGLGr----aSQA-FELIKVEQAEatehqtvy----- 157
WP_120176694  90 ieaplggRKHLDVGDRLEFSVVLFGdaLQKLALIVYAMQrAFSYEVC------RGK-ASLQCVYLETeagdepiyep--- 159
6FJW_A       100 ------------LGA-DklleIFNse----eNQTYFSIIFETPTGFKSQGSYVI--FPSXRLIFQSLXQKYGRLV----- 155
WP_013451734 153 ----dqiekpdeRLwsfds--------sdeeKSLFIKITFLSPVRMKINNRYTH--RITYLDMLRNILQRINIIGsmygd 218
WP_100919460 173 gs--------------gacrqgqvpplnpppAPALVRLRLLTPLRIKHHGRFIGpeQFTLTDLLRHLYNRLQRLAlmygg 238
WP_100919908 190 ----------dpgtgqyqqqpAAPltppappAPGAVRMHISTPLRIKRDGHFIAprDFTLTDLCHPLHIRLQRLAalygg 259
WP_102041952 197 qagapaiaphnaASA------QALvaapypaQTRRIALRFTTPLRLQHQGQPVRphALTPRKFIADLLRRISLLAefhgg 270
WP_104936783 161 lrp-------------pdnppclhlaagapgPAGELGLGLLTPLRLKDQNSLQS--ALPFSLLVRAALRRVSALEehygs 225
WP_106683686 170 -------------gpapaapwAPAplppaapLDGHATLHLRTPLRLQQRGQIANagQLGARLLLIALARRWQLLLdvhlg 236
WP_119334768 164 ---gkalkphdpAIPkt------------pdLRGTVTLQFHTPLRLQTNGRRATreEHTARKLLTALIRRIALLNayhgn 228
WP_119632443 158 -------------epgqplrlTPArtppipaLPERFEIRLETPLRLKREDHLVTpaQFGFGDLFGHLLRRLSMLSyfhad 224
WP_120176694 160 --gaesikphaqQLTlTap-----------rGEADKTLRFVTPLRLQNNGKIYGakDIEPLPFLTALVRRIGLLAefhg- 225
6FJW_A       156 -----ENQPe--iEEDTLDylSEHS---TITNYRLETSYfrvhrQRIPAFRGKLTFKVqgaktLKAYVKXLLTFGEYSGL 225
WP_013451734 219 geklkIDLKkmse-----keeRNSLiwvEYDRYSARQESe----MKLGGAVGEVVLKGs----FSKWEVSLLKACEIFGL 285
WP_100919460 239 -qpqtFDWPkaqaLLSGLRlqDPALtwhDWTRYSSRQQTl----MQLGGLMGDLVIGGp----ALSQVWPELWFGQWAHV 309
WP_100919908 260 -qpqpFEWSraapLMDGLAlhDCRLrwhDWTRYSSRQGSl----MQLGGLLGELTIQGp----ALAEVWPVLWAGQWTHV 330
WP_102041952 271 qadavGNVHelvaLADTLQh-RRNLrwqDWSRYSSRQKQe----MILGGAIGTWTFSG-----ELTALLPWLHLGQWLHV 340
WP_104936783 226 -grpaLDYHalvvQAGAVEsvQADTrwqEIKRYSNRQKRe----MLLGGMVGRLRFRG-----HISVFLPLLRYAEAVNL 295
WP_106683686 237 aqapqQDFArlsaQADALTltGHQLqwfDWGRYSARQQRe----MRLGGLLGSVQLKG-----KLAPFSELLHLGQWLHV 307
WP_119334768 229 -epfvLDLKalanQANLITs-ETQLrwhDWTRYSTRQKKh----MALGGVVGTWKLMG-----DLTPFAPFLHLGQWVHV 297
WP_119632443 225 -tpleADFAalahGSRTVPvhEPALhwhDWTRYSSRQQTt----MQMGGLLGRFELRGe----DVEPFWPYLWLGQWTHV 295
WP_120176694 226 -dkpnLNYHalreAALAVEs-SHALswqNWKRYSSRQQKs----MYLGGLVGTWTLSR-----VPEALQIFLELGSYLHV 294
6FJW_A       226 GXKTSLGXGGIKLEE 240
WP_013451734 286 GKNTSFGFGEVKVEV 300
WP_100919460 310 GKGTAFGLGAYRLEA 324
WP_100919908 331 GKGTAFGLGAYRLAA 345
WP_102041952 341 GKNATLGLGAYQLLP 355
WP_104936783 296 GKQTVFGLGRIRIVE 310
WP_106683686 308 GKNATMGMGGYSLTA 322
WP_119334768 298 GKEATFGLGKYHLTL 312
WP_119632443 296 GKGATLGLGRYRIRA 310
WP_120176694 295 GKNATFGLGRYEILh 309
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