Conserved Protein Domain Family
COG5410

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COG5410: COG5410 (This model is not part of the current CDD release)
Uncharacterized domain, often fused with C-terminal phage terminase domain [Mobilome: prophages, transposons]
Statistics
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PSSM-Id: 512749
Aligned: 134 rows
Threshold Bit Score: 182.427
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013098051  10 LSFPERVVLRS----KSTKSFLNF------T-RLWFELiqGD-RLL-VNWHHRLMASKIDDLI-A-GRLepRNLIINIPP 74 
WP_066134533   1 ------------mqeYPVGGGESF------PaFVMAWNta--mNLG-TPAHHHRMAGWLEQRWsSsAQ---RNALLMSFR 56 
WP_119679673   4 AESAPTsip----gpLPWTEKVPF------PeFAQMWAeh--eGRN-LPPPQLWMAGWLGRAW-ReGR---RDLLLLAFR 66 
WP_158046925   1 -----------------mERFESF------RdFLIVWNtf--qDLP-SPDHHMRIAEWLTTGW-YgGD---RRLLLMAFR 50 
WP_135079821   1 -----------------mKNRVAF------PeFVMLWDql--qGLT-MPQHHLKICRWLDQSW-SaGQ---RELLLMAFR 50 
WP_131154333  57 qrdpefAARADlagqRARGDASGFngtlqdFeRAFIPSpeGG-RVE-QSFYTAAIHRALEGTR-E-GEI----TLVLLPP 128
WP_246068797   2 AEFQQItps----lpMEVAQQVSL------TdFVRFWNrr--qHLG-LPDLHREILDWLEQSW-QdGR---KELLLLVFR 64 
WP_213497191  22 LLRLDRELLIR----SARSNFAAY------AtAIn----pSTyRYDcDSHFYGDLYSHVDAFA-H-GEI--PLLIIEAPA 83 
WP_014103367   1 --------------mIQKTNPMAF------RlFVVLWNqr--qGLA-TPSVHLFMATWLESAW-RaGD---NRLLLMAFR 53 
WP_044977966   1 --mnekEALLK----FAKDDLITY------ScLVd-------sTYT-PNRFHEFLASRLQAAI-E-RGK--GRIMIFAPP 56 
WP_013098051  75 GGTKTEFFSIHFPAYVNALVqegklKRFRNLNISFADTLVKRNSRRTRDIIASKE---------YQELWP--------CS 137
WP_066134533  57 NSGKSTLVG-LFCAWVLYRV-----PETRILVVAAEHGLARKMARNVKRIIERHAm--------TSGLLP---------- 112
WP_119679673  67 GSGKSSVAG-LFCAWALAGD-----PDIRILVLAAEDELAAKMVRTVKHVLERHPv--------CIGLRP---------- 122
WP_158046925  51 NSGKSTVVG-LFAAWLLKTD-----PSLRIMVLAADLALAKKMVRTVKRIVERHPq--------TQGLKP---------- 106
WP_135079821  51 NSGKSTLVG-LYCAWLLYLD-----ADRRIMVMAADFALAKKMVRNVKRIIERHPl--------TKRLKP---------- 106
WP_131154333 129 GARKTTTLE-NWAVGKLATD-----PNHRILNISKSLDHAKKSVGRMQALLTDTSl--------TAEMIArfgpfkeyGQ 194
WP_246068797  65 DAGKSTLVG-LFAAWLLLRD-----PGLRILVLAAEQTLARKMVRNVKRIIERHPl--------TRGLMP---------- 120
WP_213497191  84 GTGKSETVSQLLPTFLAGNF-----PNDRTIAAAHTASLAEEQARAVKMIIEPGIekadpldiqFSDVFPh-------IK 151
WP_014103367  54 SCGKSTLVG-LFAAWLLYTN-----PDLRILVVAAETSLARRMVRNVRRIIERHPl--------TQNLKP---------- 109
WP_044977966  57 QHGKSYLVSKLFIAWALGKI-----PDLKVISASYGDDLVQQNGQAVRNFVSGPI---------HQSIFg--------NR 114
WP_013098051 138 FGVN---------QAEEWE------IKDdrgrsIGQTVSRSSNGQITGGRGgyfgtefsGMVMLDDYNK-PVDMLSESRR 201
WP_066134533 113 -SSRdq------wAADEFTvar-raEWR-----DPSMLARGIGANITGARA--------DLVVCDDVEV-PNTCTSAVRR 170
WP_119679673 123 -PKIel------wGADALTvar-agTSR-----DPSMLAKGIGANFTGSHA--------DIVICDDVEV-PNTCATAHAR 180
WP_158046925 107 -ERAdq------wASDQFTvrr-pmELR-----DPSMLALGIGANLTGSRA--------DVVICDDVEV-PRTCDTAPKR 164
WP_135079821 107 -KRKeq------wASDQFTvnr-psELR-----DPSMLAKGIGANITGSRA--------DVVICDDVEV-PNTCDSAPKR 164
WP_131154333 195 EKRGkp------wAQDHFTvatstlSHR-----DYSMTARGWTSQIYGSRA--------DTIIIDDPQT-IDDVDQT--- 251
WP_246068797 121 -PSRdq------wASDQFTvnr-svEWR-----DPSMLARGLNGNITGCRA--------DIVLCDDVEV-PATSDTPQKR 178
WP_213497191 152 LGSSrtgrrsdrtRQDLFDy-----SGF-----RGGYTCAGVDGPISGRRA--------KWLLLDDPIKdRLAADSPVHR 213
WP_014103367 110 -KNAdq------wGADRFTvnr-amELR-----DPSMVAAGITANATGSRA--------DVIICDDVEV-PNTCDTADKR 167
WP_044977966 115 IEQSt-------rAKDYFL------TNT-----GGQYLGVTIRGGGTGFPS--------RLFVIDDPFKsRAEAESEAFR 168
WP_013098051 202 NSANTLLVNTIRSRRGDKskehpTPFVSIQQRLHTDDATGFMLSGGM--GV-------KFHHVAI--PALIDEKyiqsla 270
WP_066134533 171 SDLRARLRE-LDYVIVPG-----GMQLYIGTPHAADSVYAATASPDDpdAGpf---ldGFERLEI--PLVDE-------- 231
WP_119679673 181 AELRRRLGE-ITHVLVPG-----GTVLYIGTPHAADSIYGAEPGPg--gAEpf---laGFHRLEI--PVEGS-------- 239
WP_158046925 165 EDLRERLGE-IDYILVPG-----GMQLYVGTPHSYYTIYADEPRREIgeGVpf---ldGFQRLLI--PIRDA-------- 225
WP_135079821 165 LDLRARLQE-IDYVLVPG-----GLQLYVGTPHTYYTIYAEDKRHEGeeEEpf---llGFDRFML--PLLNE-------- 225
WP_131154333 252 EKKLDKLRLDIFTRRPGPg---rGRVVILGTRLDHGDLYERLIEEDV-----------VDHYLKF--PVVDG-------- 307
WP_246068797 179 EDLRARLAE-IDYVLVPD-----GTQLYAGTPHTYYSIYALAPRREIgeQApf---laGFHRLEL--PVLDE-------- 239
WP_213497191 214 EHVWRWYTDVFRRRGTPN-----WRMCIVSTRWHLDDLVGRIRKKAKenPKvpqpvvlTFQSLKTqdPRIEPRP------ 282
WP_014103367 168 RDLRDRLAE-MDFILTPG-----GTMLYVGTPHSWFTIYADKARSEIgeVRpf---ldGFRRLKI--PVLDR-------- 228
WP_044977966 169 NHVKDWYRSVCYTRLAED-----SILVIMHTRWHADDLAGWLLSEh--kHE-------NWELISL--PAIAESDd----- 227
WP_013098051 271 epwrslcweTVKDTDSvevsgtryWSYWPQMEDVNDLLQLW-EKDRYTFLSQYQQNPMA-L------------------- 329
WP_066134533 232 --------------AG--------VPAWPERFPAAAIEALRqRTGPRKFASQMQLLPVNsEdgrl--------------- 274
WP_119679673 240 --------------RG---------PVWPEVFGQEEISRIRtLSGPSRFASQMMLKPVPvVagllnpellrrydaeilyr 296
WP_158046925 226 --------------EG--------RSAWPTRFSNEAIERIRrATGPNKFESQMMLKPVSiAdgrl--------------- 268
WP_135079821 226 --------------NG--------QSQWPERFPDQNIEAIRrRTGKNKFESQMMLRPVNiSesrl--------------- 268
WP_131154333 308 --------------DG--------EPVDPVVFPKEHLPKVRkQVGEQSWAAAYMMRPKL-Genatfpsdaldeckqpama 364
WP_246068797 240 --------------RD--------DSRWPERFPRERLDSIRrRTGAARFAAQMLLQPVStEdarl--------------- 282
WP_213497191 283 ---------NDKRKEG--------EALVPWIRSKEQLEEER-ALEPRAFAALDQQLPEA-Eggye--------------- 328
WP_014103367 229 --------------DG--------NSAWPERYSVQDIARMRaSTGENRFRSQMMLEPVNiAegrl--------------- 271
WP_044977966 228 ---------IMSRLEG--------EALVPERFSVESLNQKRlTVGSRDWVSLYQQRPIE-Aggni--------------- 274
WP_013098051 330 ----TGGIIDTDWFQTYTTLPKLTHRAVYVDTNSGKVEDWLDYTVFTLVGMGVDGNLYIIDVVRGRWDPEDLLKKAEEVW 405
WP_066134533 275 -dpdLLRVYDGDLRLIQGNGESLLTIGGVRMVSVACCWDPAFGAGSDGRRDGSVVAALFCDGDGTYWLHRICWLPTAPAG 353
WP_119679673 297 eagrRPVMELAGRRVVSARAWWDPSLARAGGDASVVAVVFFGAEGDAWLHRIEYLSAGAAEESAQAQCEAVAGLLRSVPV 376
WP_158046925 269 -dpdLMLPYEAELDYREARGVPVLMLGDRRMVSASCWWDPAYGAAAPDGAAREGRAGDGSVVAAVFSDADGGYWLHRIRY 347
WP_135079821 269 -dpdMMQLYEADLDYNEHNQMASLSLDGQKLVSSSCWWDPSFGSPHKGDASVIAALFTDEQGQYWLHALRYMTHDPHLLK 347
WP_131154333 365 agplAEHEQAAPVVIGVDPNLGAGYTSLCALAYWPDRARVLDSHEWYGLSRTEDILDRLERWASAYRPVDVRIEINAFQR 444
WP_246068797 283 -dpgRIPIYGGELEVEHLSGDRMLLTIEGRRMVSASCWWDPAFGMPRNGDGSVIAAVYGDADGGYWLHRIQWLEQQPGSS 361
WP_213497191 329 fnadWFEGSDLWFDQFPRGDLTFTGIALDPSLGRNAKHGDYSAYVLLASDDSGTLWVEGDLARRPTTTMVDDGLDLAVRF 408
WP_014103367 272 -dpaRLVRYGDDAVFSPELRQLHIGAARMVSCAAYWDPAFGRSGGDRSVLAIVFTDTDGNLYLHHVLYMNCDGATEDEAT 350
WP_044977966 275 fkqeWLRFYDEAYMRKSAMAMNRYIIVDPARTQKKESDYTAMVVIGLNLDGNYYLLDAVYDRLTLKQRAETLIDLHRKWM 354
WP_013098051 406 EKWRMQGSLRIMPMRHMAIEEKQAGQGLITTLKKRNSIPVKEIPRGTGQNKLVRCLNVIPQIKTGKVYVPATHDEHGAIR 485
WP_066134533 354 SRDDVATWQCRHVAAFVRDLHLPAIRVEINGLGRFLPSLLRKVLADDNLPVAVLEYTSHRSKAERILEALDAPLAAGRLK 433
WP_119679673 377 RTLHVEANGVGGFLPQLLRGVLARHGLAVSVCKEVSRAPKAQRIQEGIEARLAAGMLHAHAGVFATPLIAEMRDWRPEGA 456
WP_158046925 348 LTAVPDGGDHEAAQQCRQVAEFLRDLHLPSVMLETNGVGKFLPGILRRELARYGVAASVVEKNSSVPKDRRILEAFDAVL 427
WP_135079821 348 EADEATQMCRQVVNFVKEFYLPSVCLETNGVGKFLPGLLRRELEREGISCAVIEKHSRTNKAERILSAFDVVLASRALNV 427
WP_131154333 445 GLQKDERLRALAREYGFSIREHTTDKKKVSHDLEQLGIATMARSFLKREIEVPWHRDGECDVASCSACHELPDSREVGWT 524
WP_246068797 362 LDAASQLCAQATSFAKALHLPAIRLETNGIGKFLPSLLRRTLAQADCGAGVIECTSRKAKSARILQAFDVVLAAGALQAH 441
WP_213497191 409 QRETGRYLDGFGCETVGFQELLQPLFDAPGMAWITRRKRAARKPVYAV-------------------------------- 456
WP_014103367 351 AQSRAVVDAVKRFHVPAVTIEINGIGRFLPAILRRELAKGRVPCAVVEHSSSRPKNIRILESFETVMAARLLRVHGDVWK 430
WP_044977966 355 PLQVGYKKTGHEQDIEYISEAQNRQNYRFAVIPLSEHGAKNARIERLAPDFENSKWWLPSTMWKTNSEGIAKDLIEQLIN 434
WP_013098051 486 PHVYYEDGTVAGTTSWVITAMTECAAFSADDSHDNDD 522
WP_066134533 434 AHRSVLQTPFITELRDWRPDGRGHDDGLDAVAACLLA 470
WP_119679673 457 GPDDGLDALAGCLLAEPLRLPAGKPAPGAVRPPAFPM 493
WP_158046925 428 AAGALHAHRSVWDTPFVREMREWRPGGRHKGHDDGLD 464
WP_135079821 428 HRNVWKTSFPTEMREWVPTLSAKDDALDAVAGCLLSE 464
WP_131154333 525 RRRMEPLVQELEAWRPVRGSRLKQDRVMSLWIAWIRW 561
WP_246068797 442 RSVTDTPFFAEMREWRPDGRSRDDGLDAVSGCLLSEP 478
WP_213497191     -------------------------------------    
WP_014103367 431 TPFLTEMQDWTPTRDNGADDGLDAVAGALSLQPVRLQ 467
WP_044977966 435 EEYKAFPAGRHDDFLDCISGIKDMNTRFPMLNTITRP 471
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