Conserved Protein Domain Family
COG5362

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COG5362: COG5362 
Phage terminase large subunit [Mobilome: prophages, transposons]
Statistics
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PSSM-Id: 444137
Aligned: 74 rows
Threshold Bit Score: 162.157
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013269413  20 FGVFLELIFAVLNPGVALARGWYLSAMIQALNEVSDGSSRRLQITVPPRHLKSITTTVAFTAWMMGRDPTYKIICASYGQ 99 
AKM82917      17 FRRALTRESFSWFFVTYFTHYITCPTAPFQKEIFNLLQNEGILKVVITAFRGSAKSTIATLAYPIWAMLGRPAKKYTLVV 96 
WP_012415125   1 -MKKNLQKEVQSDFYTFYRYVAKGHTGWWLRELCDFLQYEVYFRFLKKELPISTIEAPVQHGKSRVLRHFLCWLIGLHPE 79 
WP_012659985  76 NYAKTVSTINVAPAWLAVNFPEIRMAIVSHKKKHADKRAKTAVASIEEACERYGVSVYDSSKTTLQLEAGTHNIEPTLEP 155
WP_012955093  46 GRVSGILLGVPSRHGKSTLISKNFCSYFLSYFPNEQVILSSYSQGLASEFGGQVKDIVNHYGYLSPYKPTIRSDSKAKNK 125
YP_010942     16 AEAHARYGAILTEANRHGAQVVLATLAELGRLDLFFLLVVLLKRKDADNDWCFARCREVAASPDGHLDLWAREHYKSTII 95 
WP_013036446  26 SPNALRAWNDFAYFAEYVTGKTAAEHHLEWITELVTGISSQTLELVAGDNLSILAPRGSAKSTWIAMWVAWVIGHNPSIQ 105
WP_014791883  11 RYLQKLALARSAGAPNPYETAQEKAQRLELFKKNPADMVAYYFPHYATCDCSEFHLEWANMVLKDKTFKGICQWGRALAK 90 
WP_075095022  35 FVREAWEIVEPAVPFVDNWHLHLLCGRLERCLVTPDDKLLINIPPGCMKSLLASVFWPCWAWGPGGWPESRWFFASYMQD 114
WP_006928184   8 REYDRRAEELIRRIRAEAKPFPDDTPEGKVKRRNRARQDFFYFCKTYLPHHFEEDFDRHQKQCEKLIHIWNEIIQIMAFR 87 
WP_013269413 100 ELSSNLSRDFRKVVTSALYKQIFPVTATSIVRDTDTEVRTRQSGFRFATAVGSTVTGYGADLIIIDDLMKAADASYPEAR 179
AKM82917      97 SQTQDLSKQILTNIKQELSSNELLIRDFGPFTEVADEWRSNSFVIPQYNARISAISQSESIRGLRHYQYRPDLIVIDDVE 176
WP_012415125  80 LRFNFYTAAEDLRDETKIDVDIILESPEYMAIFGQRKSSTLKDTSETFQIYNPEGPNGKVNFRLMGAGNIGHPSHISLID 159
WP_012659985 156 LSIRTSDTGSHYDVIIYDDIATLTNQTTALRGTISENFEEFYDNVSAKAGATCLPHKSLNIVIGTRKTPEDVYREHVLST 235
WP_012955093 126 FKLNEPYRGQMLSAGAGGSIMGYGAGLLIVDDPIKNVAEAESKVRQAKLKDWWGGTIKSRVQRRSNGLPPIKIVIAQRLH 205
YP_010942     96 TFALTIQDILCTPDITVGIFSHSRPGAKAFLQQIKREFEENPVLRAAYPDVLWDNPRTDAPQWSLDGGIVVKRASNPKEA 175
WP_013036446 106 IIYVSYSESVALSRSRIIKRIIESPKYREVFPNVLPGKRWSDTDWEIRKDFAGVDSLDSDYTFYATGITGSITSRRSDLV 185
WP_014791883  91 SVWNNVFIPFWLWLRGEDMYFIIIGNNKKRAEQLLEDLRAEFEANPRIISDFGEQVQQGTWEDGFFITKSGFIGQALGMG 170
WP_075095022 115 LATRDSMKCRVIVTSPWYQRQWPVRLTGDANLKTWFQNTSGGYRLATSVGGRGTGDHPDVIVCDDPHNVRQTESAAQRQE 194
WP_006928184  88 GWGKSTFFITAYGLYATLYKLNPYIIVVSDTEDQAAEQMLTVKVELEENPRIKQDFGDLQSHDWAEEDFTTTSGVKWKAF 167
WP_013269413 180 ARAQRFVDESLFTRLNNKATGAVIAIQQRLHEDDVSAHLTAKGGYRHLDLPAIAVRDEIVPLTRGRSHARRIGDVLNPDR 259
AKM82917     177 DLESVKTREGRDKLWNWYTGEAMPIGEMNTKIVIVGNLLHEDSLMMRLKESINSGKMDGVYREYPLLDKNDNIAWPGKYP 256
WP_012415125 160 DPYRNKEDALSKTMRDKIASRFRADIITRRQERSMVVVLHSRWHESDLIGWITKNISKDELISFSYPAIMPNGEALFPEL 239
WP_012659985 236 NNPEWDDCIARGVSRPGWAARIWRATPDWHVIENETYQVHATNGEVYDSIRDVPADVEIIDDGIRAGPDTEFRTLWPAFE 315
WP_012955093 206 LKDLHGIIKETEPTIPANDAFRILRNGGSIDPNTWVDFNLPAICDSEDDILGRKIGEVLWEEQRDYEWLMAEKRSMGSYL 285
YP_010942    176 TVEAWGLVDGQPIGKHFSLLVYDDVVTPESVTTPDQIRKTTDALAVSYNLGAHGGRRRFIGTRYHFSDTYKDILDRETAV 255
WP_013036446 186 VYDDIIKSSESIENPEVREKITTNYSEVIRPTLKPGGRQVNIGTRFRADDIHCTDFIPAKGWKQIVQQAIVDDDDGKEVS 265
WP_014791883 171 QSVRGLRVKNLRPTHIVADDIETKELVKNPKRQLEMVEWILRDLIPTMDGTIRRFVQANNRFAPIMIQTILAEKNKDWKV 250
WP_075095022 195 ALSWWDGTITSRGRSRKARRVVCMQRLHTQDLSGHLIAQGGYEHLCLPMRFEAGRCAVDPRTEAGGLLWPALFDEASVQE 274
WP_006928184 168 GYKSKILGRRYMQYRPGIAFVDDFENEESVKNPAQTKKRLEYIYNQLFPAMAKKFQIFYLCTRLARYCVAGELEKNKEIK 247
WP_013269413 260 EPLSVLDEIRVGLGSRAFEAQYQQNPt------------------PADGDIIRWDRLQFHDddpidyrtrDGR--RLLH- 318
AKM82917     257 SMMHIETKRRQVADESAWYREYLLKFi------------------SDDKRIVQRSWPKYYE---------VLP--DLRNy 307
WP_012415125 240 RSLAFLNKQRGILTPGEFASLYQQSPi------------------VEGGNKFKAEMFEFVD---------ELP--ETFD- 289
WP_012659985 316 APETLLTKVVSKDGSAGLWRAENQQNp-----------------eAAIGRVLDLDWLRFVD---------PIPr-EDWSs 368
WP_012955093 286 FNSIYQGQPVERDGEIFKREWFQDEV--------------------------NHKLTCLIDp-------kDIPkd----- 327
YP_010942    256 PRIYPATVDGSVTGLPHFLSPEALAAkrrdmgpyifgcqmlqnpkADDAAGFKAEWLRYWE--------------PSRDl 321
WP_013036446 266 YWPERFTLEELQALREDSPVAFSFQYqnr--------------vmRSSETSIDPLWIKHGE----------FP--DHFD- 318
WP_014791883 251 HEVNAYNPVSYAPTWHQKYEADYFKEleaeigtla-anaeynnspYVEGVIFKDEQFQWCK----------LPriDHFE- 318
WP_075095022 275 LERGMGSLRAAGQLQQRPTAAEGDIF-----------------------------RLEFLSrr-----tlRWP--Vd--- 315
WP_006928184 248 TFLLPAENNKGRATCPQRFPLTRLKKvrkvigiiayskqyllrilSDETRPFQDQWIVRINr----------Pe-EKYK- 315
WP_013269413 319 ----KVVISWDT------ADTVSPSADYSVGTVWG----NDGTAWKLL-DLIRVRLAY-SDLLARVRLERSRWL------ 376
AKM82917     308 ---wLLGIGVDL------AISEKSTADFTALIPFIvtgyGDDLKIYILpYIVNKRINF-TDTIVEIKRVCDLLNqd--fk 375
WP_012415125 290 ----YTFSTSDT------SYKKGQENDYTVCANWG----VYKDDLYLT-SIFRERIEA-KEADGRLRPIIKQHSvw---- 349
WP_012659985 369 ---lEWYAGLDFanpnnlAAEQRGETDYWALAVYAf--dRENDQEYAV-DTWRDRGYMwEEAATEFVGVHLSDY------ 436
WP_012955093 328 ---lPQLRYWDF------GAS-GDAGDGTSAILTS----YDGEYLYVL-DLVAGKFSS-LKVLKTFKRLCKKDGk----q 387
YP_010942    322 cermNRYIIVDP------AHSKKAAADYTVMWVVGf---GADGYRYVI-EGVRDRLNL-AERTRELFRLVRAHR------ 384
WP_013036446 319 ----SLCIGGDL------SASLRERADYTVFVLGG----RVGNKFYIL-DIRRGRWSGnIEKLDQIIELWADWGe----l 379
WP_014791883 319 ----AIIAHWDI------AYAGTANSDYNAVVIAG----LKDKKFYVI-DTFCLQSKM-KQAAEWICDYQKQLPs----s 378
WP_075095022 316 ---gRAVRYWDT------AGTQ-GGGDWTVGVLMA----EADGIYYVC-DVARQQVGY-RERERLIAETALRDQsrfrnp 379
WP_006928184 316 ----RIAAFIDP------SVGATRKNDFKSVVFVG----WTDKYYDVI-YSWIKQASI-DRMIRRTYTLYDEIR------ 373
WP_013269413 377 A-DLIIAEEAGVGRAILDSLSRDTrrqsepehhAPWCVrLA-AS-PRLGKA--------ERFAAASDPLYAGKALLARDA 445
AKM82917     376 RvPTAYVENVNYQVSLVQQLTLE-----------KVMA-EA-VPiSGMNKQ--------TRLEMATPYIRQGKVLFPQHG 434
WP_012415125 350 gyRKAWIEPKGHGIFLNQTFSDDKelm----mpDEAEL-KEfFKdRSVDKV--------ERANNATASLSNRKVKIYSRI 416
WP_012659985 437 PvGELLVESNFDGKEIAETIEDNV----------DVRV-TP-TA-SEGEKE--------QRLHRLANRFQQGKVKVASTE 495
WP_012955093 388 TrVMVEQEPGSGSKLLIKKFRREEd-------lRGYNI-RA-DK-VQVSKK--------VRAFDLEGLAEDRRIKMVPAH 449
YP_010942    385 P-LCVGYERYGLQADV-EHIRGEQdr-----tgYHFDI-VE-LG-GAMPKA--------DRIRRLVPLFEQGRIFLPGRM 446
WP_013036446 380 P-ITLCAEAVAYQSSLKGDFTHYLvne---kqiFNIQY-QQ-PT-TKGDKL--------QRLRGVSGLFQNGLVTFNQYR 444
WP_014791883 379 AiIHWQYEAQFWNDEVSRILEETQse-----kgVQLNI-TK-KQlPKVDKL--------NRILTLQPYFQNARIYFNEKL 443
WP_075095022 380 P-ETYIERPTGLGAESTDRMLQQL---------AGLRA-RP-DR-VTGRRSyvqgeeipGRWMNLAAQVESGNVVLVEGE 446
WP_006928184 374 P-HRIGLETNGFQILLKKEFIRAAke-----egFHLPI-KT-VV-QKENKE--------LRIERLSPLVENGLIRFVQGA 436
WP_013269413 446 p--WL-----------EDLRREMMAFP--NGRHDDQVDSVSQFLTWMVGNGGRRLLDPRRVD 492
AKM82917     435 a---------------ENLISQIVNFG--IEKHDDLVDAFTIIILKILESDRPTYKSAGppr 479
WP_012415125 417 h--CK-----------DEILIEALSFP--NGDHDDFVDTLIDAIKILVSSSSGRAVATAIPI 463
WP_012659985 496 nerWE-----------SFIREEWLPFP--DAAHDDRFDALEIASRGPNGSVDHVSSDDFDHL 544
WP_012955093 450 ---WN-----------NKLIDQLVAFTgeDGGEDDIVDTITGSCRFWTRPRRRVKA------ 491
YP_010942    447 s--YRdvegrwrdltgEFVQEEYLAFP--VCGHDDMLDCLARQVDEALGAVFPDEDDYAASV 504
WP_013036446 445 ---MM-----------GRLVDELINFG--AMDKDDCVDALVYCLVGLMGRRKLEVA------ 484
WP_014791883 444 k-pNKh---------fQVGLAQLKGIEpgYKVHDDFPDALEVCISELEKFTPVRKSKFLMGK 495
WP_075095022 447 ---WT-----------RAFVDELLAAP--NGAHDDQVVAAAGAFSMLTVNRAVDLErwlrtl 492
WP_006928184 437 g--DN-----------ELLIEQLLDFP--DGAHDDGPDALEGAIRLLEQITGRTGETEITII 483
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